prot_S-dermatodea_contig80697.16252.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig80697.16252.1
Unique Nameprot_S-dermatodea_contig80697.16252.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length95
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A8F0F7A9_9PHAE (Cytochrome f n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A9_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.490e-46
Identity = 80/94 (85.11%), Postives = 88/94 (93.62%), Query Frame = 0 
Query:    1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            MK LKK ++FILI+FT I+N+ T  VA+SQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQI+SPKA+LPNKVFEAAVKIPYSKDAKQILGN
Sbjct:    1 MKTLKKVLQFILISFTFIVNSFTFSVAISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIDSPKAILPNKVFEAAVKIPYSKDAKQILGN 94
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A8F0FB28_9PHAE (Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB28_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.670e-42
Identity = 75/94 (79.79%), Postives = 86/94 (91.49%), Query Frame = 0 
Query:    1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            MK L++ +KFI+I+   I ++LT+ V +SQAYPIYAQQAYTNPRAANGR+ACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPY+KDAKQILGN
Sbjct:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRLACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGN 94
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A516ICS4_9PHAE (Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepID=A0A516ICS4_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 4.710e-42
Identity = 73/94 (77.66%), Postives = 87/94 (92.55%), Query Frame = 0 
Query:    1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            M++LK+ +KFI+I+F  II++L + V +S+AYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKA+LPNKVFEAAVKIPY+KDAKQ+L N
Sbjct:    1 MELLKRLMKFIMISFIFIISSLALSVKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQVLSN 94
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: D1J7B1_ECTSI (Cytochrome f n=3 Tax=Ectocarpales TaxID=2877 RepID=D1J7B1_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 3.730e-41
Identity = 72/94 (76.60%), Postives = 85/94 (90.43%), Query Frame = 0 
Query:    1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            M++LK+ +KF +I+F  +I+++   + +S+AYPIYAQQ YTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN
Sbjct:    1 MELLKRLMKFFIISFIFVISSIPFSMEMSEAYPIYAQQGYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A8F0F9U7_9PHAE (Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U7_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.730e-41
Identity = 71/94 (75.53%), Postives = 86/94 (91.49%), Query Frame = 0 
Query:    1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            M++L++ +K + I+F +II++ T+ + +SQAYPIYAQQAY NPRAANGRIACANCHLAEKPVQIESPKA+LPNKVFEAAVKIPY+KDAKQILGN
Sbjct:    1 MQLLRRLVKILSISFILIISSFTLCIQMSQAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQILGN 94
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A6B7F215_9PHAE (Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F215_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.730e-41
Identity = 71/94 (75.53%), Postives = 86/94 (91.49%), Query Frame = 0 
Query:    1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            M++L++ +KF +I+F  II+++   + +S+AYPIYAQQAYTNPRAANGRIACANCHLAEKPVQ+ESPKAVLPNKVFEAAVKIPY+KDAKQILGN
Sbjct:    1 MELLRRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQVESPKAVLPNKVFEAAVKIPYAKDAKQILGN 94
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: D1GJK5_FUCVE (Cytochrome f n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJK5_FUCVE)

HSP 1 Score: 142 bits (358), Expect = 1.170e-39
Identity = 70/94 (74.47%), Postives = 82/94 (87.23%), Query Frame = 0 
Query:    1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            MKI K+ +K  +I+F  I + LT+ + +SQAYPIYAQQ+YTNPRAANGR+ACANCHLAEKP+QIESPKAVLPNKVFE AVKIPY +DAKQILGN
Sbjct:    1 MKICKRIMKMFMISFMFIFSFLTLSIEISQAYPIYAQQSYTNPRAANGRLACANCHLAEKPIQIESPKAVLPNKVFEVAVKIPYPQDAKQILGN 94
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A6B9TMM8_SARFS (Cytochrome f n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TMM8_SARFS)

HSP 1 Score: 139 bits (351), Expect = 1.300e-38
Identity = 71/94 (75.53%), Postives = 81/94 (86.17%), Query Frame = 0 
Query:    1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            MKILKK +K +LI+F +I  + T     SQAYPIYAQQAY NPRAANGR+ACANCHLAEKP+QIESPKA+LPNKVFEAAVKIPY ++AKQILGN
Sbjct:    1 MKILKKIMKILLISFMLIHISFTFSCKDSQAYPIYAQQAYANPRAANGRLACANCHLAEKPIQIESPKAILPNKVFEAAVKIPYPREAKQILGN 94
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A2I4Q308_9PHAE (Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q308_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 5.800e-37
Identity = 63/89 (70.79%), Postives = 79/89 (88.76%), Query Frame = 0 
Query:    6 KTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            + +K+ L+   ++I++LTV +  S+AYPIYAQQAYTNPRAANGRIACANCHLAEKP++IE+PKA+LPN VFE A+KIPY+KDAKQILGN
Sbjct:    7 RILKYFLLNSILVISSLTVSITNSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPIEIEAPKAILPNSVFETAIKIPYAKDAKQILGN 95
[Close]
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A8E5XRH3_9PHAE (Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH3_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.910e-35
Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 0 
Query:    1 MKILKK----TIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN 94
            MKIL+K    T+K I+++ + +  +   F   SQAYPIYAQQAY NPRAANGRIACANCHLAEKPVQIESPK++LPNKVF+A VKIPY+KDAKQILGN
Sbjct:    1 MKILRKKLETTLKIIILSCSFMSLSFGFFNYTSQAYPIYAQQAYNNPRAANGRIACANCHLAEKPVQIESPKSILPNKVFDAIVKIPYAKDAKQILGN 98
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F7A9_9PHAE1.490e-4685.11Cytochrome f n=1 Tax=Protohalopteris sp. TaxID=284... [more]
A0A8F0FB28_9PHAE1.670e-4279.79Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62... [more]
A0A516ICS4_9PHAE4.710e-4277.66Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepI... [more]
D1J7B1_ECTSI3.730e-4176.60Cytochrome f n=3 Tax=Ectocarpales TaxID=2877 RepID... [more]
A0A8F0F9U7_9PHAE3.730e-4175.53Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577... [more]
A0A6B7F215_9PHAE3.730e-4175.53Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=... [more]
D1GJK5_FUCVE1.170e-3974.47Cytochrome f n=3 Tax=Fucaceae TaxID=3010 RepID=D1G... [more]
A0A6B9TMM8_SARFS1.300e-3875.53Cytochrome f n=14 Tax=Sargassaceae TaxID=3014 RepI... [more]
A0A2I4Q308_9PHAE5.800e-3770.79Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID... [more]
A0A8E5XRH3_9PHAE1.910e-3570.41Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 ... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002325Cytochrome fPRINTSPR00610CYTOCHROMEFcoord: 27..38
score: 61.96
coord: 60..80
score: 67.08
coord: 81..94
score: 36.09
coord: 40..59
score: 73.48
IPR002325Cytochrome fPROSITEPS51010CYTFcoord: 31..94
score: 28.88
IPR024094Cytochrome f large domainPFAMPF16639Apocytochr_F_Ncoord: 32..94
e-value: 4.5E-28
score: 98.5
IPR036826Cytochrome f large domain superfamilyGENE3D2.60.40.830coord: 32..94
e-value: 4.9E-29
score: 103.4
IPR036826Cytochrome f large domain superfamilySUPERFAMILY49441Cytochrome f, large domaincoord: 32..94
NoneNo IPR availablePANTHERPTHR33288:SF3CYTOCHROME Fcoord: 13..94
NoneNo IPR availablePANTHERPTHR33288FAMILY NOT NAMEDcoord: 13..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig80697contigS-dermatodea_contig80697:70..354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig80697.16252.1mRNA_S-dermatodea_contig80697.16252.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig80697 1..354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig80697.16252.1 ID=prot_S-dermatodea_contig80697.16252.1|Name=mRNA_S-dermatodea_contig80697.16252.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=95bp
MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRI
ACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002325Cyt_f
IPR024094Cyt_f_lg_dom
IPR036826Cyt_f_lg_dom_sf