mRNA_S-dermatodea_contig80697.16252.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A8F0F7A9_9PHAE (Cytochrome f n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A9_9PHAE) HSP 1 Score: 202 bits (513), Expect = 1.440e-62 Identity = 103/118 (87.29%), Postives = 111/118 (94.07%), Query Frame = 1
Query: 1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
MK LKK ++FILI+FT I+N+ T VA+SQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQI+SPKA+LPNKVFEAAVKIPYSKDAKQILGN QLSSLNVGAVVILPEGFKLAPNN
Sbjct: 1 MKTLKKVLQFILISFTFIVNSFTFSVAISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIDSPKAILPNKVFEAAVKIPYSKDAKQILGNGQLSSLNVGAVVILPEGFKLAPNN 118
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A8F0FB28_9PHAE (Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB28_9PHAE) HSP 1 Score: 190 bits (482), Expect = 6.910e-58 Identity = 97/118 (82.20%), Postives = 108/118 (91.53%), Query Frame = 1
Query: 1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
MK L++ +KFI+I+ I ++LT+ V +SQAYPIYAQQAYTNPRAANGR+ACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPY+KDAKQILGN QLS LNVGAVVILPEGFKLAPNN
Sbjct: 1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRLACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNN 118
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A516ICS4_9PHAE (Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepID=A0A516ICS4_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.570e-56 Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 1
Query: 1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
M++LK+ +KFI+I+F II++L + V +S+AYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKA+LPNKVFEAAVKIPY+KDAKQ+L N QLS LNVGAVVILPEGFKLAP N
Sbjct: 1 MELLKRLMKFIMISFIFIISSLALSVKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQVLSNGQLSGLNVGAVVILPEGFKLAPKN 118
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: D1J7B1_ECTSI (Cytochrome f n=3 Tax=Ectocarpales TaxID=2877 RepID=D1J7B1_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.570e-56 Identity = 94/118 (79.66%), Postives = 107/118 (90.68%), Query Frame = 1
Query: 1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
M++LK+ +KF +I+F +I+++ + +S+AYPIYAQQ YTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN QLS LNVGAVVILPEGFKLAPNN
Sbjct: 1 MELLKRLMKFFIISFIFVISSIPFSMEMSEAYPIYAQQGYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNN 118
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A8F0F9U7_9PHAE (Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U7_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.570e-56 Identity = 93/118 (78.81%), Postives = 108/118 (91.53%), Query Frame = 1
Query: 1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
M++L++ +K + I+F +II++ T+ + +SQAYPIYAQQAY NPRAANGRIACANCHLAEKPVQIESPKA+LPNKVFEAAVKIPY+KDAKQILGN QLS LNVGAVVILPEGFKLAPNN
Sbjct: 1 MQLLRRLVKILSISFILIISSFTLCIQMSQAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNN 118
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A6B7F215_9PHAE (Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F215_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.570e-56 Identity = 93/118 (78.81%), Postives = 108/118 (91.53%), Query Frame = 1
Query: 1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
M++L++ +KF +I+F II+++ + +S+AYPIYAQQAYTNPRAANGRIACANCHLAEKPVQ+ESPKAVLPNKVFEAAVKIPY+KDAKQILGN QLS LNVGAVVILPEGFKLAPNN
Sbjct: 1 MELLRRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQVESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNN 118
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: D1GJK5_FUCVE (Cytochrome f n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJK5_FUCVE) HSP 1 Score: 180 bits (457), Expect = 4.060e-54 Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 1
Query: 1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPN 351
MKI K+ +K +I+F I + LT+ + +SQAYPIYAQQ+YTNPRAANGR+ACANCHLAEKP+QIESPKAVLPNKVFE AVKIPY +DAKQILGN QLS LNVGAVVILPEGFKLAPN
Sbjct: 1 MKICKRIMKMFMISFMFIFSFLTLSIEISQAYPIYAQQSYTNPRAANGRLACANCHLAEKPIQIESPKAVLPNKVFEVAVKIPYPQDAKQILGNGQLSGLNVGAVVILPEGFKLAPN 117
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A6B9TMM8_SARFS (Cytochrome f n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TMM8_SARFS) HSP 1 Score: 178 bits (451), Expect = 3.250e-53 Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 1
Query: 1 MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
MKILKK +K +LI+F +I + T SQAYPIYAQQAY NPRAANGR+ACANCHLAEKP+QIESPKA+LPNKVFEAAVKIPY ++AKQILGN QLS LNVGAVVILPEGFKLAP+N
Sbjct: 1 MKILKKIMKILLISFMLIHISFTFSCKDSQAYPIYAQQAYANPRAANGRLACANCHLAEKPIQIESPKAILPNKVFEAAVKIPYPREAKQILGNGQLSGLNVGAVVILPEGFKLAPSN 118
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A2I4Q308_9PHAE (Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q308_9PHAE) HSP 1 Score: 173 bits (439), Expect = 2.140e-51 Identity = 84/113 (74.34%), Postives = 100/113 (88.50%), Query Frame = 1
Query: 16 KTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
+ +K+ L+ ++I++LTV + S+AYPIYAQQAYTNPRAANGRIACANCHLAEKP++IE+PKA+LPN VFE A+KIPY+KDAKQILGN QLS LNVGAVVILPEGFKLAP N
Sbjct: 7 RILKYFLLNSILVISSLTVSITNSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPIEIEAPKAILPNSVFETAIKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPKN 119
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Match: A0A8E5XRH3_9PHAE (Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH3_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.310e-50 Identity = 91/122 (74.59%), Postives = 104/122 (85.25%), Query Frame = 1
Query: 1 MKILKK----TIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGN*QLSSLNVGAVVILPEGFKLAPNN 354
MKIL+K T+K I+++ + + + F SQAYPIYAQQAY NPRAANGRIACANCHLAEKPVQIESPK++LPNKVF+A VKIPY+KDAKQILGN QLSSLNVGAVVILPEGFKLAP+N
Sbjct: 1 MKILRKKLETTLKIIILSCSFMSLSFGFFNYTSQAYPIYAQQAYNNPRAANGRIACANCHLAEKPVQIESPKSILPNKVFDAIVKIPYAKDAKQILGNGQLSSLNVGAVVILPEGFKLAPSN 122 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig80697.16252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig80697.16252.1 >prot_S-dermatodea_contig80697.16252.1 ID=prot_S-dermatodea_contig80697.16252.1|Name=mRNA_S-dermatodea_contig80697.16252.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=95bp MKILKKTIKFILITFTVIINNLTVFVAVSQAYPIYAQQAYTNPRAANGRIback to top mRNA from alignment at S-dermatodea_contig80697:1..354- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig80697.16252.1 ID=mRNA_S-dermatodea_contig80697.16252.1|Name=mRNA_S-dermatodea_contig80697.16252.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=354bp|location=Sequence derived from alignment at S-dermatodea_contig80697:1..354- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig80697:1..354- >mRNA_S-dermatodea_contig80697.16252.1 ID=mRNA_S-dermatodea_contig80697.16252.1|Name=mRNA_S-dermatodea_contig80697.16252.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at S-dermatodea_contig80697:1..354- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |