prot_S-dermatodea_contig10224.162.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10224.162.1
Unique Nameprot_S-dermatodea_contig10224.162.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length514
Homology
BLAST of mRNA_S-dermatodea_contig10224.162.1 vs. uniprot
Match: D7FIG3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG3_ECTSI)

HSP 1 Score: 375 bits (964), Expect = 2.630e-120
Identity = 241/547 (44.06%), Postives = 301/547 (55.03%), Query Frame = 0
Query:   23 EFRKWTKRSLRLEDEISEYHEAD-GGIQAVCLQEVTPKTLQDTWVPFMRSLGLDGYVYQPKHASPKRHSSHEHLGVAVFYSNHHFENTAEMRVFFPEHVHRLRVDSDSSSRRESKRTRSDSSGAARRPTDDDATEK----------------YVETVHDGSPSSDLDSGDGRSAHACTTSRLEQDLSSKPDAAVMVRLRLRSGGTAKQQPS--------------FTLVCCHLWYHPLRPDLKTAQCHLLFDAIRRFHEECGVAMVSEEVTGGGERGC-VAETGPANLIICGDFNSVPVVQPVFLPGPLKATAKMSLKAHNKRGGH--------SNTSSGSSIYPSAEEAASGVYSLLSYGRVAAKHPEHPDAFIPELLRKERTGKNGRSRTPR----KEHDPAIRH-----PDTPPLHHSLGAWSTGFGTALEDVYRDRGVLAPRFTTKTIRFSGVIDHMFVSSGEKNSGLAIAGALTFPAGADLAEG-----AGAGTHLKGVEDV--NNEVQKPARKRAGERFGPIPDEVWGSDHLALGVEIAFL 513
            + R W  R  RL +EI  Y ++D GG+Q +CLQEVT +TL   W+PFM  LGLD +VYQPK   P+R      LGVA+FYS+ HFE  AE+RV F E    LR D      R  +  RS SS A+  P    A  K                ++  V+ G    D   G  R     T SRLEQDL+++ DAA +VRLRL+     ++  S              FT+VC HL+Y P RPDLKTAQC +LF AI R HE+CGVA       GGG+ G  +   GPANL++C DFNS P+V P FLPGPLKA A+  L+     G          S  ++   +YPS++  ASGVY LL+YG V   HPEHPD FIPE L+++   +  R   P+    K   P         P  P  H   G W +GFG  LED YRDRG ++P FTTKT  FSG+IDH+FVS+GEK+SGLAI+G L FP GA L EG     +G      G E      E   P    A   FGPIP+++WGSDHLALGVE+  L
Sbjct:   92 DIRNWPTRRDRLREEIWSYCKSDPGGVQVICLQEVTFRTLGYDWLPFMAKLGLDRHVYQPKSDRPQRRHRSRCLGVAIFYSSTHFEKMAEVRVVFSEETLGLRED------RGREGERSHSSRASELPEAVPAAPKATTTRAGKGAAPPCDQFLRRVYGG----DTGRGAKREQDPATVSRLEQDLANRHDAAALVRLRLKESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVA----SALGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQELPKVGGGKLWTPRRTRRTRGAPVVPAEHRPSGEWVSGFGGTLEDAYRDRGAVSPSFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDLEQSGPEPTPDRQEEHSPTDPPAWGEFGPIPNKLWGSDHLALGVELVLL 624          
BLAST of mRNA_S-dermatodea_contig10224.162.1 vs. uniprot
Match: A0A7S4DBB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBB1_HETAK)

HSP 1 Score: 85.5 bits (210), Expect = 5.020e-14
Identity = 99/327 (30.28%), Postives = 137/327 (41.90%), Query Frame = 0
Query:  191 LSSKPDAAVMVRLRLRSGGTAKQQPSFTLVCCHLWYHPLRPDLKTAQCHLLFDAIRRFHEECGVAMVSEEVTGGGERGCVAETGPANLIICGDFNSVPVVQPVFLPGPLKATAKMSLKAHNKRGGHSNTSSGSSIYPSAEEAASGVYSLLSYGRVAAKHPEHPDAFIPELLRKERTGKNGRSRTPRKEHDPAIRHPDTPPLHHSLGAWSTGF---GTALEDVYR--DRGVLAPRFTTKTIRFSGVIDHMFVSSGEKNSGLAIAGALTFPAGADLAEGAGAGTHLKGVEDVNNEVQKPARKRAGERFGPIPDEVWGSDHLALGVEIAF 512
            L+ K DAA M+ L+ +  GT      F +V  H ++ P  PD K  Q   +  A++ F  +    MV E V    E+  V      ++I CGD NSVP VQ  +LPG  K       K           + G ++  SAE+  S VY+LL +G V   H +HPDA     L   RT       +P K+   A +   +     S    S G       L ++Y   D  +  P FTTKT  F   ID+++                              GT    VE +   +Q P      ERF P+P++ WGSDHLALGV  +F
Sbjct:  243 LNEKSDAAAMLLLQDKRAGT-----KFVVVNMHNFFDPWFPDTKACQVAGVARALQIFLND----MVLEGVLSPDEKEKV------HIIFCGDMNSVPYVQEEWLPGN-KEMRYYQTKDIEILESSDKFALGRNVPESAEDM-SAVYALLHFGEVRPSHVQHPDA-----LHLHRTTAAATKDSPGKQGGLAEKEGSS---KGSAAGRSVGLLEGPRGLRNLYMEGDGRMHLPSFTTKTNVFCATIDYLW------------------------------GTKDVVVEQL---LQFPENT---ERFSPVPNQFWGSDHLALGVTFSF 508          
BLAST of mRNA_S-dermatodea_contig10224.162.1 vs. uniprot
Match: A0A7S4C664_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C664_CHRCT)

HSP 1 Score: 73.9 bits (180), Expect = 6.390e-12
Identity = 55/182 (30.22%), Postives = 77/182 (42.31%), Query Frame = 0
Query:  180 HACTTSRLEQDLSSKPDAAVMVRLRLRSGGTAKQQPSFTLVCCHLWYHPLRPDLKTAQCHLLFDAIRRFHEECGVAMVSEEVTGGGERGCVAETGPANLIICGDFNSVPVVQPVFLPGPLKATAKMSLKAHNKRGGHSNTSSGSSIYPSAEEAASGVYSLLSYGRVAAKHPEHPDAFIPELL 361
            H     RL + L  + +A +M+ LR R+ G         +   HL++ P RP++K AQ  L+ +A  RF  EC                      PA ++I GDFNSVP +QP F+         + +     R                E + S VY L S G   A+HPEHPD F P+ L
Sbjct:   12 HVFHKGRLRETLHMQDEAVLMLLLRHRASGAC-----VLVATTHLFWDPYRPEVKAAQAELVAEATTRFLIECD--------------------RPAAVVITGDFNSVPHLQPEFIG--------IDVSEEEMR----------------ENSLSAVYQLYSQGICPARHPEHPDRFKPKAL 144          
BLAST of mRNA_S-dermatodea_contig10224.162.1 vs. uniprot
Match: A0A1D1ZX90_AUXPR (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZX90_AUXPR)

HSP 1 Score: 63.2 bits (152), Expect = 2.780e-7
Identity = 73/292 (25.00%), Postives = 104/292 (35.62%), Query Frame = 0
Query:  216 SFTLVCCHLWYHPLRPDLKTAQCHLLFDAIRRFHEECGVAMVSEEVTGGGERGCVAETGPANLIICGDFNSVPVVQPVFLPGPLKATAKMSLKAHNKRGGHSNTSSGSSIYPSAEEAASGVYSLLSYGRVAAKHPEHPDAFIPELLRKERTGKNGRSRTPRKEHDPAIRHPDTPPLHHSLGAWSTGFGTALEDVYRDRGVLAPRFTTKTIRFSGVIDHMFVSSGEKNSGLAIAGALTFPAGADLAEGAGAGTHLKGVEDVNNEVQKPARKRAGERFGPIPDEVWGSDHLALG 507
            +F     HL+YHP  PDLK  Q H    A+R F                      A+ GP  L++ GDFNS+             A  ++S +                  P      SGVY LLS GRVA  + +HP +       +    + GR R                        W T  G +LE          P FT  T  F+G +D++++S G+      + GA+  P G++  E                    P +   G  +GP+P     SDH+ALG
Sbjct:   70 AFCAAVTHLYYHPRHPDLKVLQAHAACAAVRAFAS--------------------AQGGPQPLLLAGDFNSL-------------AEKRVSDEFDE--------------VPEGCIKVSGVYELLSQGRVAHSNSDHPAS-------RNSPAELGRLRDVE---------------------W-TSTGLSLESAAVRAWGREPSFTNHTPSFTGCLDYVWLSRGDWQ----VVGAMAMPGGSEGGE--------------------PNQATPG--YGPLPSATEPSDHVALG 259          
BLAST of mRNA_S-dermatodea_contig10224.162.1 vs. uniprot
Match: A0A3M7KQT1_AUXPR (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KQT1_AUXPR)

HSP 1 Score: 62.4 bits (150), Expect = 4.690e-7
Identity = 72/292 (24.66%), Postives = 104/292 (35.62%), Query Frame = 0
Query:  216 SFTLVCCHLWYHPLRPDLKTAQCHLLFDAIRRFHEECGVAMVSEEVTGGGERGCVAETGPANLIICGDFNSVPVVQPVFLPGPLKATAKMSLKAHNKRGGHSNTSSGSSIYPSAEEAASGVYSLLSYGRVAAKHPEHPDAFIPELLRKERTGKNGRSRTPRKEHDPAIRHPDTPPLHHSLGAWSTGFGTALEDVYRDRGVLAPRFTTKTIRFSGVIDHMFVSSGEKNSGLAIAGALTFPAGADLAEGAGAGTHLKGVEDVNNEVQKPARKRAGERFGPIPDEVWGSDHLALG 507
            +F     HL+YHP  PDLK  Q H    A+R F                      A+ GP  +++ GDFNS+             A  ++S +                  P      SGVY LLS GRVA  + +HP +       +    + GR R                        W T  G +LE          P FT  T  F+G +D++++S G+      + GA+  P G++  E                    P +   G  +GP+P     SDH+ALG
Sbjct:   86 AFCAAVTHLYYHPRHPDLKVLQAHAACAAVRAFAS--------------------AQGGPQPILLAGDFNSL-------------AEKRVSDEFDE--------------VPEGCIKVSGVYELLSQGRVAHSNSDHPAS-------RNSPAELGRLRDVE---------------------W-TSTGLSLESAAVRAWGREPSFTNHTPSFTGCLDYVWLSRGDWQ----VVGAMAMPGGSEGGE--------------------PNQATPG--YGPLPSATEPSDHVALG 275          
BLAST of mRNA_S-dermatodea_contig10224.162.1 vs. uniprot
Match: A0A1D1ZNS3_AUXPR (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZNS3_AUXPR)

HSP 1 Score: 63.2 bits (152), Expect = 5.220e-7
Identity = 73/292 (25.00%), Postives = 104/292 (35.62%), Query Frame = 0
Query:  216 SFTLVCCHLWYHPLRPDLKTAQCHLLFDAIRRFHEECGVAMVSEEVTGGGERGCVAETGPANLIICGDFNSVPVVQPVFLPGPLKATAKMSLKAHNKRGGHSNTSSGSSIYPSAEEAASGVYSLLSYGRVAAKHPEHPDAFIPELLRKERTGKNGRSRTPRKEHDPAIRHPDTPPLHHSLGAWSTGFGTALEDVYRDRGVLAPRFTTKTIRFSGVIDHMFVSSGEKNSGLAIAGALTFPAGADLAEGAGAGTHLKGVEDVNNEVQKPARKRAGERFGPIPDEVWGSDHLALG 507
            +F     HL+YHP  PDLK  Q H    A+R F                      A+ GP  L++ GDFNS+             A  ++S +                  P      SGVY LLS GRVA  + +HP +       +    + GR R                        W T  G +LE          P FT  T  F+G +D++++S G+      + GA+  P G++  E                    P +   G  +GP+P     SDH+ALG
Sbjct:  183 AFCAAVTHLYYHPRHPDLKVLQAHAACAAVRAFAS--------------------AQGGPQPLLLAGDFNSL-------------AEKRVSDEFDE--------------VPEGCIKVSGVYELLSQGRVAHSNSDHPAS-------RNSPAELGRLRDVE---------------------W-TSTGLSLESAAVRAWGREPSFTNHTPSFTGCLDYVWLSRGDWQ----VVGAMAMPGGSEGGE--------------------PNQATPG--YGPLPSATEPSDHVALG 372          
BLAST of mRNA_S-dermatodea_contig10224.162.1 vs. uniprot
Match: A0A835WGX7_9CHLO (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WGX7_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 1.700e-6
Identity = 83/327 (25.38%), Postives = 120/327 (36.70%), Query Frame = 0
Query:  196 DAAVMVRLRLRSGGTAKQQPSFTLVCCHLWYHPLRPDLKTAQCHLLFDAIRRFHEECGVAMVSEEVTGGGERGCVAETGPANLIICGDFNSVPVV-QP-VFLPGPLKATAKMSLKAHNKRGGHSNTSSGSSIYPSAEEAASGVYSLLSYGRVAAKHPEHPDAFI--PELLRKERTGKNGRSRTPRKEHDPAIRHPDTPPLHHSLGAWSTGFGTALEDVYRDRGVLAPRFTTKTIRFSGVIDHMFVSSGEKNSGLAIAGALTFP---AGAD--LAEGAGAGTHLKGVEDVNNEVQKPARKRAGERFGPIPDEVWGSDHLALGVEIAFL 513
            + AVM  LR R  G           C H +++P+ PD+K  Q  LL   +  F ++                          +++CGDFNS+    QP VF P                              P      SGVY LLS G +A  HP+HP   +  P  +        G           A R P  P     L A     G+     +       P  TT+T  F+G +D++++S      GL +  AL+ P    G+   +A GA A              + P    A     P+P+E +GSDHLA+G E+ F+
Sbjct:  159 EGAVMALLRHRDSGRL-----LVFSCTHAFWNPVFPDVKALQVALLCGELAAFSKQAAAEQGGXXXXX--XXXXXXXXXXXXVVLCGDFNSLAEKRQPDVFDPQ----------------------------VPEGARQVSGVYQLLSGGTLAPDHPDHPHTRVWKPGPMAPTVIPAGGEG---------APRFPALP-----LSASGLRLGSLNALAFGRE----PPLTTRTATFAGTLDYVWLSQ----PGLEVTAALSLPFEDGGSPPLMAPGAAAAGPGAAASTQPGTWRDPVADVA---MVPVPNEEYGSDHLAVGGEVQFV 425          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10224.162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FIG3_ECTSI2.630e-12044.06Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A7S4DBB1_HETAK5.020e-1430.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4C664_CHRCT6.390e-1230.22Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A1D1ZX90_AUXPR2.780e-725.00Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A3M7KQT1_AUXPR4.690e-724.66Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A1D1ZNS3_AUXPR5.220e-725.00Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A835WGX7_9CHLO1.700e-625.38Endo/exonuclease/phosphatase domain-containing pro... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 22..503
e-value: 1.6E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 21..512
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 27..512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10224contigS-dermatodea_contig10224:4760..7909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10224.162.1mRNA_S-dermatodea_contig10224.162.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10224 3745..7982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10224.162.1 ID=prot_S-dermatodea_contig10224.162.1|Name=mRNA_S-dermatodea_contig10224.162.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=514bp
MGPRFGRASQQGQSVTTLRRRKEFRKWTKRSLRLEDEISEYHEADGGIQA
VCLQEVTPKTLQDTWVPFMRSLGLDGYVYQPKHASPKRHSSHEHLGVAVF
YSNHHFENTAEMRVFFPEHVHRLRVDSDSSSRRESKRTRSDSSGAARRPT
DDDATEKYVETVHDGSPSSDLDSGDGRSAHACTTSRLEQDLSSKPDAAVM
VRLRLRSGGTAKQQPSFTLVCCHLWYHPLRPDLKTAQCHLLFDAIRRFHE
ECGVAMVSEEVTGGGERGCVAETGPANLIICGDFNSVPVVQPVFLPGPLK
ATAKMSLKAHNKRGGHSNTSSGSSIYPSAEEAASGVYSLLSYGRVAAKHP
EHPDAFIPELLRKERTGKNGRSRTPRKEHDPAIRHPDTPPLHHSLGAWST
GFGTALEDVYRDRGVLAPRFTTKTIRFSGVIDHMFVSSGEKNSGLAIAGA
LTFPAGADLAEGAGAGTHLKGVEDVNNEVQKPARKRAGERFGPIPDEVWG
SDHLALGVEIAFL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
IPR036691Endo/exonu/phosph_ase_sf