prot_S-dermatodea_contig10212.156.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10212.156.1
Unique Nameprot_S-dermatodea_contig10212.156.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length101
Homology
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BLAST of mRNA_S-dermatodea_contig10212.156.1 vs. uniprot
Match: A0A6H5J6P9_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6P9_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 6.240e-36
Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 0 
Query:    1 MILRLNTGFVNNDTGIVRYSRRDIFWRYAKGWLIVDLLAAFPFTFIPGLGPDDTEGYHEIAYFLSLPKILRLYGLLTMAQENHRLHEGGFLAIRTLLSVIM 101
            +++ LNTGFV+  TG V YSR  I  RYAKG LIVDLLAA PFTF+PGLGP   +G HEIAY LSLPK+ ++Y L+TM  ENHRLHEG FLA+RTLL V+M
Sbjct:   78 VLVHLNTGFVDGTTGKVVYSRMAIGQRYAKGALIVDLLAALPFTFVPGLGPGSADGNHEIAYLLSLPKMFQVYWLMTMVYENHRLHEGMFLAVRTLLCVVM 178
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BLAST of mRNA_S-dermatodea_contig10212.156.1 vs. uniprot
Match: D8LG26_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG26_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 3.440e-35
Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 0 
Query:    1 MILRLNTGFVNNDTGIVRYSRRDIFWRYAKGWLIVDLLAAFPFTFIPGLGPDDTEGYHEIAYFLSLPKILRLYGLLTMAQENHRLHEGGFLAIRTLLSVIM 101
            +++ LNTGFV+   G V YSR  I  RYAK  LIVDLLAAFPFTFIPGLGP   +G HEIAY LSLPK+ ++Y L+TM  ENHRLHEG FLA+RTLLSV++
Sbjct:  288 VLVHLNTGFVDGTDGKVVYSRMAICRRYAKHALIVDLLAAFPFTFIPGLGPGSADGNHEIAYLLSLPKMFQVYWLMTMVYENHRLHEGTFLAVRTLLSVVV 388
[Close]
BLAST of mRNA_S-dermatodea_contig10212.156.1 vs. uniprot
Match: A0A1R2AL77_9CILI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AL77_9CILI)

HSP 1 Score: 55.8 bits (133), Expect = 7.060e-7
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 0 
Query:   11 NNDTGIVRYSRRDIFWRYAKGWLIVDLLAAFPFTFIPGLGPDDTEGYHEIAYFLSLPKILRL--YGLLTMAQENHRLHE 87
            N++ G +   R+ IF +YAKGW+++DL+  FPF  I   G   T G    A FL LPK+ RL  +  L    ++H  +E
Sbjct:  197 NDNQGNLITDRKQIFLKYAKGWMVIDLITWFPFDLIQQTGT--TSGGKTFARFLRLPKLYRLLRFSKLLKLMKSHTQNE 273
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10212.156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J6P9_9PHAE6.240e-3666.34Cyclic nucleotide-binding domain-containing protei... [more]
D8LG26_ECTSI3.440e-3566.34Cyclic nucleotide-binding domain-containing protei... [more]
A0A1R2AL77_9CILI7.060e-737.97Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..79
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10212contigS-dermatodea_contig10212:4398..5587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10212.156.1mRNA_S-dermatodea_contig10212.156.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10212 4398..5587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10212.156.1 ID=prot_S-dermatodea_contig10212.156.1|Name=mRNA_S-dermatodea_contig10212.156.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=101bp
MILRLNTGFVNNDTGIVRYSRRDIFWRYAKGWLIVDLLAAFPFTFIPGLG
PDDTEGYHEIAYFLSLPKILRLYGLLTMAQENHRLHEGGFLAIRTLLSVI
M
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