prot_S-dermatodea_contig12286.1432.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12286.1432.1
Unique Nameprot_S-dermatodea_contig12286.1432.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length253
Homology
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: D8LD59_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD59_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 1.800e-97
Identity = 150/232 (64.66%), Postives = 184/232 (79.31%), Query Frame = 0
Query:   21 SHSERAGSAWKNVHARGNLKALLAGLVGDYGVQEVLNDHHVHEHTLSKLLPVFRDMVSEYPDTAFPGEAGQKTQVAISNLCYHGKFRADAVMKKKPIKAKGTSGRTYTFAMAAPVGLGDEKKFSKARTSLLEGAFIPRLVELANKHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
            S+S++ GSAWKNVHA+  L+ LL GL  DYGVQE+L  HH+ +HT+SKLL VF D+V ++PDTAFPGEAGQK Q  +S+LCYH KF+ADAV+ K+PI+ + TSGR++TF+   P   G E  F K R  ++E   IPRLVELA + + +EI + KR+  +VDLR+PQ  FPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGA R+PGDGP G+FCGPLRLLALEVYEQ+ 
Sbjct:  394 SYSQQQGSAWKNVHAKKKLRWLLKGLASDYGVQEMLARHHISKHTMSKLLRVFEDLVLDHPDTAFPGEAGQKLQEEMSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKR-GREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGADRQPGDGPAGLFCGPLRLLALEVYEQLN 624          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: A0A6H5K988_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K988_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 4.290e-92
Identity = 149/249 (59.84%), Postives = 182/249 (73.09%), Query Frame = 0
Query:   18 SAASHSERAGSAWKNVHARGNLKALLAGLVGDYGVQEVLNDHHVHE--------------HTLSKLLPVFRDMVSEYPDTAFPGEAGQKTQVAISNLCYHGKFRADAVMKKKPIKAKGTSGRTYTFAMAAPVGLGDEKKFSKARTSLLEGAFIPRLVELANKHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
            S  S S++ GSAWKN+HA+  L+ LL GL  DYGVQE+L  HHV +               T+SKLL VF D+V ++PDTAFPGE GQK Q  +S+LCYH KF+ADAV+ K+PI+ + TSGR++TF+   P   G E  F K R  ++E   IPRLVELA + + +EI + KR+  +VDLR+PQ  FPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGA R+PGDGP G+FCGPLRLLALEVYEQ+ 
Sbjct:  305 SGDSFSQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLALHHVSKASFSTRISCRQVSVQTMSKLLRVFEDLVLDHPDTAFPGEEGQKLQEEVSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKR-GREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRMDNIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQLN 552          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: A0A2V0P3E5_9CHLO (RNA helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P3E5_9CHLO)

HSP 1 Score: 105 bits (261), Expect = 5.250e-22
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 0
Query:  137 LGDEKKFSKARTSLLEGAFIPRLVELANKHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
            L + + +S+A    +E A  P         F +++ + +R    +DLR P  WFP AR  KRRI+YHGGPTNSGKTY A+  L  AGAGR       G++CGPLRLLA+EVYE + 
Sbjct:  196 LAEHESYSRA----VENALFPLFTAFCRHAFGQQLTAYERAVAALDLRAPHSWFPYARAIKRRIVYHGGPTNSGKTYNALRAL--AGAGR-------GVYCGPLRLLAMEVYESLN 298          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: A0A482SRD4_9ARCH (Helicase ATP-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRD4_9ARCH)

HSP 1 Score: 101 bits (251), Expect = 5.750e-22
Identity = 57/142 (40.14%), Postives = 72/142 (50.70%), Query Frame = 0
Query:  114 KKPIKAKGTSGRTYTFAMAAPVGLGDEK---KFSKARTSLLEGAFIPRLVELANKHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
            K+P      + R     M   V LG  +     +     +L+        + A       I +NK +    DL  P  WFP ARL KR+IIYHGGPTNSGKTY AI+RLK A        G  G++CGPLRLLALE+YE + 
Sbjct:   80 KQPTAVLSHTDRVQLQTMMGKVDLGKVELLEDLADVERKVLKNFLFQHAYDAALHDLENVIVTNKTVCGASDLTMPHQWFPHARLMKRKIIYHGGPTNSGKTYHAIQRLKAADP-----TGGGGLYCGPLRLLALEIYETLN 216          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: A0A2D4BGH6_PYTIN (RNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGH6_PYTIN)

HSP 1 Score: 100 bits (249), Expect = 2.110e-20
Identity = 55/117 (47.01%), Postives = 71/117 (60.68%), Query Frame = 0
Query:  142 KFSKARTSLLEG----AFIPRLVELANK--HFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
            K  K R  +LE      F P  +E A +  + P     +  + ++ DLR P   +PLA   +RRIIYH GPTNSGKTYQA+ERLK AG      DG  G++CGPLRLLALE+YE++ 
Sbjct:  348 KAEKERQQMLEKKNTFVFYPHFLEFAREKDYIPRTGEGSFTLQQITDLRLPHQLYPLANAMQRRIIYHQGPTNSGKTYQALERLKNAGE-----DG--GLYCGPLRLLALEIYERLN 457          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: A0A843VLA9_COLES (RNA helicase n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VLA9_COLES)

HSP 1 Score: 100 bits (248), Expect = 2.930e-20
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0
Query:  156 IPRLVELANKHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
             P  V+   ++FPEEI   +++ E  DL  P  WFP AR  KRRI+YH GPTNSGKTY A++R  +AG           ++C PLRLLA+EV+++V 
Sbjct:  199 FPAFVDFCLENFPEEIKKYRKLVESADLTAPHTWFPFARAMKRRIVYHCGPTNSGKTYNALQRFMEAGK---------AVYCSPLRLLAMEVFDKVN 286          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: S8C3I6_9LAMI (RNA helicase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C3I6_9LAMI)

HSP 1 Score: 99.4 bits (246), Expect = 4.450e-20
Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 0
Query:  156 IPRLVELANKHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
             P  VE    HFP+EI   KR+ +  D+  P+ WFP AR  KRRIIYH GPTNSGKTY A+ R  +A           G++C PLRLLA+EV+++V 
Sbjct:   90 FPIFVEFCIDHFPKEIRRFKRMVDSADMTKPETWFPFARAMKRRIIYHCGPTNSGKTYNALLRFMEA---------KKGVYCSPLRLLAMEVFDKVN 177          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: A0A8K1CEJ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEJ7_PYTOL)

HSP 1 Score: 99.4 bits (246), Expect = 4.940e-20
Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:  155 FIPRLVELAN--KHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
            F P  VE A    +       +  +A++ DLR P   +PLA   KRRIIYH GPTNSGKTY+A+ERLK+AG      DG  G++CGPLRLLALE+YE++ 
Sbjct:  171 FYPHFVEFAQTKNYMARSGEGSFTLAQITDLRLPHELYPLANAMKRRIIYHEGPTNSGKTYEALERLKQAGE-----DG--GLYCGPLRLLALEIYERMN 263          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: A0A7S3HC17_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC17_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.990e-20
Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 0
Query:  150 LLEGAFIPRLVELANKHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALE 246
            ++E   +PR    A     E I S + ++   DLR P  W+P  RL KR+IIYHGGPTNSGKTYQA++RL +A     P  G  G++CGPLRLLALE
Sbjct:   83 VVESVLLPR----AEVELKEVIESYRLLSTATDLRVPHEWYPKTRLMKRKIIYHGGPTNSGKTYQALKRLAEA----DPAKGG-GLYCGPLRLLALE 170          
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Match: F0YC56_AURAN (RNA helicase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC56_AURAN)

HSP 1 Score: 98.6 bits (244), Expect = 5.870e-20
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0
Query:  182 DLRHPQHWFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQVR 252
            DLR P+ W+P ARL +RR+IYHGGPTNSGKTY A+E LK+A A     DG  G++ GPLRLLALEVYE++ 
Sbjct:    5 DLRAPEEWYPKARLSRRRVIYHGGPTNSGKTYHALEALKRADA-----DGGGGVYAGPLRLLALEVYERLN 70          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12286.1432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD59_ECTSI1.800e-9764.66RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K988_9PHAE4.290e-9259.84RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A2V0P3E5_9CHLO5.250e-2245.69RNA helicase n=1 Tax=Raphidocelis subcapitata TaxI... [more]
A0A482SRD4_9ARCH5.750e-2240.14Helicase ATP-binding domain-containing protein n=1... [more]
A0A2D4BGH6_PYTIN2.110e-2047.01RNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A843VLA9_COLES2.930e-2046.39RNA helicase n=1 Tax=Colocasia esculenta TaxID=446... [more]
S8C3I6_9LAMI4.450e-2048.45RNA helicase (Fragment) n=1 Tax=Genlisea aurea Tax... [more]
A0A8K1CEJ7_PYTOL4.940e-2051.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3HC17_9STRA4.990e-2050.52Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
F0YC56_AURAN5.870e-2063.38RNA helicase (Fragment) n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 186..252
e-value: 9.4E-13
score: 49.7
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 155..251
NoneNo IPR availablePANTHERPTHR12131:SF1ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIALcoord: 155..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12286contigS-dermatodea_contig12286:965..4583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12286.1432.1mRNA_S-dermatodea_contig12286.1432.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12286 965..4583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12286.1432.1 ID=prot_S-dermatodea_contig12286.1432.1|Name=mRNA_S-dermatodea_contig12286.1432.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=253bp
GRGESSGGGSRDRGGKRSAASHSERAGSAWKNVHARGNLKALLAGLVGDY
GVQEVLNDHHVHEHTLSKLLPVFRDMVSEYPDTAFPGEAGQKTQVAISNL
CYHGKFRADAVMKKKPIKAKGTSGRTYTFAMAAPVGLGDEKKFSKARTSL
LEGAFIPRLVELANKHFPEEINSNKRIAEVVDLRHPQHWFPLARLRKRRI
IYHGGPTNSGKTYQAIERLKKAGAGRKPGDGPVGIFCGPLRLLALEVYEQ
VR*
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