mRNA_S-dermatodea_contig12266.1424.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 327 bits (837), Expect = 1.360e-102 Identity = 158/233 (67.81%), Postives = 185/233 (79.40%), Query Frame = 3
Query: 603 DYHASMTDAMFMESLERRLAPAFKKL--FGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWVKDLEKV 1295
DYHA+MTD+MFME LE RL+PA+ + F K+MILVLDNASYHHGFD EV+VPE+N+KK+NVDLLR FGA++I V+RK+ GV E++ EVP E GS+FP GGVS+ EVA ATREY+ L+HP +L ERV FM+ KGW LIWTPPYMP+FQPIELFWQHGK YVS FE+ RKM EVW QIR GWYGD+ W GQEGGWK ANCSKLV HAIGEMNKWVKD ++V
Sbjct: 246 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQ--GVVEYNLEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWVKDRDEV 474
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 332 bits (850), Expect = 1.390e-102 Identity = 162/235 (68.94%), Postives = 188/235 (80.00%), Query Frame = 3
Query: 603 DYHASMTDAMFMESLERRLAPAFKKL--FGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWVKDLEKVLS 1301
DYHA+MTD+MFME LE RL+PA+ + F K+MILVLDNASYHHGFD EV+VPETN+KK+NVDLLR FGA++I V+RK+ GV E++FEVP E GS+FP GGVS+ EVA ATREY+ L+HP +L ERV FM+ KGW LIWTPPYMP+FQPIELFWQHGK YVS NFE+ RKM EVW QIR GWYGD+ W GQEGGWK A+CSKLV HAIGEMNKWVKD + VLS
Sbjct: 363 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQ--GVVEYNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLS 593
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 322 bits (824), Expect = 3.530e-102 Identity = 157/235 (66.81%), Postives = 185/235 (78.72%), Query Frame = 3
Query: 603 DYHASMTDAMFMESLERRLAPAFKKL--FGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWVKDLEKVLS 1301
DYHA+MTD+MFME LE RL PA+ + F K+MILVLDNASYHHGFD +V++PE+N+KK+NVDLLR FGA++I VKRK+ + ++FEVP E GS+FP GGVS+ EVA ATREY+ L+HP +L ERV FM+ KGW LIWTPPYMP+FQPIELFWQHGK YVS NFE+ RKM EVW QIR GWYGD+ W GQEGGWK A+CSKLV HAIGEMNKWVKD + VLS
Sbjct: 93 DYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRKEGEQGV----YNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLS 321
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE) HSP 1 Score: 327 bits (839), Expect = 3.740e-102 Identity = 160/235 (68.09%), Postives = 187/235 (79.57%), Query Frame = 3
Query: 603 DYHASMTDAMFMESLERRLAPAFKKL--FGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWVKDLEKVLS 1301
D+HA+MTD+MFME LE RL+PA+ + F K+MILVLDNASYHHGFD EV+VPETN+KK+NVDLLR FGA++I V+RK+ GV E++ EVP E GS+FP GGVS+ EVA ATREY+ L+HP +L ERV FM+ KGW LIWTPPYMP+FQPIELFWQHGK YVS NFE+ RKM EVW QIR GWYGD+ W GQEGGWK A+CSKLV HAIGEMNKWVKD + VLS
Sbjct: 262 DHHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQ--GVVEYNLEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLS 492
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 331 bits (848), Expect = 6.620e-102 Identity = 162/235 (68.94%), Postives = 188/235 (80.00%), Query Frame = 3
Query: 603 DYHASMTDAMFMESLERRLAPAFKKL--FGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWVKDLEKVLS 1301
DYHA+MTD+MFME LE RL+PA+ + F KKMILVLDNASYHHGFD EV+VPETN+KK+NVDLLRKFGA++I VKRK+ G E +FEVP E GS+FP GGVS+ EVA ATREY++L++P +L ERV FM+ KGW LIWTPPYMP+FQPIELFWQHGK YVS NFE+ RKM EVW QIR GWYGD+ W+GQEGGWK ANCSKLV HAIGEMNKWV+D + LS
Sbjct: 397 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQ--GFVEHNFEVPSEPGSSFPAGNRE--GGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLS 627
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 328 bits (842), Expect = 2.760e-101 Identity = 161/235 (68.51%), Postives = 187/235 (79.57%), Query Frame = 3
Query: 603 DYHASMTDAMFMESLERRLAPAFKKL--FGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWVKDLEKVLS 1301
DYHA+MTD+MFME LE RL+PA+ + F K+MILVLDNASYHHGF EV+VPETN+KK+NVDLLR FGA++I V+RK+ GV E++FEVP E GS+FP GGVS+ EVA ATREY+ L+HP +L ERV FM+ KGW LIWTPPYMP+FQPIELFWQHGK YVS NFE+ RKM EVW QIR GWYGD+ W GQEGGWK A+CSKLV HAIGEMNKWVKD + VLS
Sbjct: 373 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQ--GVVEYNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLS 603
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 312 bits (800), Expect = 4.820e-95 Identity = 153/227 (67.40%), Postives = 179/227 (78.85%), Query Frame = 3
Query: 603 DYHASMTDAMFMESLERRLAPAFKKLFGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVA--EFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWV 1277
DYH +MTD MFME LERRLAPAFK +G+KKMILVLDNASYHHG+D EV VPE+NSK YN LLRK+ + ITV+R+ T+ + GV ++ F+VP A TFP A S GVS EVA+ATR + QL HPTKL+E+VE FM G+GW+LIWTPPYMP+FQPIELFWQHGK YVSFNF+ R M EVW Q+R GWYGD W GQ+GGWKPA+CSKLVAHA+ EMNKWV
Sbjct: 367 DYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTS-SAGVRSKKYTFQVP--ATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFWQHGKQYVSFNFKTKRTMAEVWAQVRKGWYGDPTWEGQKGGWKPADCSKLVAHAVKEMNKWV 590
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: A0A6H5KF39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF39_9PHAE) HSP 1 Score: 288 bits (738), Expect = 1.170e-89 Identity = 139/204 (68.14%), Postives = 161/204 (78.92%), Query Frame = 3
Query: 690 KKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWVKDLEKVLS 1301
K++I VLDNASYHHGFD EV+VPETN+KK+NVDLLR FGA+++ V+RK+ GV E++FEVP E GS+FP GGVS+ EVA ATREY+ L+HP +L ERV FM+ KGW LIWTPPYMP+FQPIELFWQHGK YVS NFE+ RKM EVW QIR GWYGD+ W GQEGGWK A+CSKLV HAI EM KWVKD VLS
Sbjct: 97 KRIIFVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSMRVRRKEGEQ--GVVEYNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVHHAIREMKKWVKDRNGVLS 296
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: A0A6H5JZ34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ34_9PHAE) HSP 1 Score: 281 bits (719), Expect = 7.250e-88 Identity = 143/230 (62.17%), Postives = 170/230 (73.91%), Query Frame = 3
Query: 618 MTDAMFMESLERRLAPAFKKL--FGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWVKDLEKVLS 1301
MTD+MFME LE RL P + + F K++IL+LDNASYHHGFD EV+VPE+N+KK+NVDLLR FGAQ+I VKRK+ GV E++FEVP E GS+FP GGVS+ VA ATREY+ L+HP +L +RV ++ TPPYMP+FQPIELFWQHGK YVS FE+ RKM EVW IR GWYGD+ W GQEGGWK ANCSKLV HA+ EMNKWVKD + VLS
Sbjct: 1 MTDSMFMEWLEHRLNPGYNTIPEFKGKRIILILDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAQSIRVKRKEGEQ--GVVEYNFEVPTEPGSSFPAGNRE--GGVSRAGVATATREYIHLNHPERLEQRVGGVVEYN----FETPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVPIRKGWYGDKEWPGQEGGWKAANCSKLVDHALREMNKWVKDRDGVLS 222
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 288 bits (737), Expect = 3.010e-87 Identity = 139/225 (61.78%), Postives = 167/225 (74.22%), Query Frame = 3
Query: 603 DYHASMTDAMFMESLERRLAPAFKKLFGDKKMILVLDNASYHHGFDEEVRVPETNSKKYNVDLLRKFGAQNITVKRKQTAPNLGVAEFHFEVPQEAGSTFPGARSVSVGGVSKEEVAIATREYLQLHHPTKLIERVEAFMQGKGWELIWTPPYMPTFQPIELFWQHGKAYVSFNFEMGRKMHEVWEQIRLGWYGDEGWAGQEGGWKPANCSKLVAHAIGEMNKWV 1277
DYH +MTD MFM+ L+ RL PAF F +KKM LVLDNASYHH FDEEV+VPETNSKKYNV+LLRK+G + V R+ AE++FEVP + + P A + GVSKEE+A TR Y + + P KL E+ E +M+ KGW LIWTPPYMPTFQPIELFWQHGK YVS +FE GR + +VW+QIRLGWYGD W GQEGGWK ANC KLV HAIG+M++W+
Sbjct: 250 DYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGK---AAEYNFEVPAQG--SLPNANRKN--GVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWI 467 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12266.1424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12266.1424.1 >prot_S-dermatodea_contig12266.1424.1 ID=prot_S-dermatodea_contig12266.1424.1|Name=mRNA_S-dermatodea_contig12266.1424.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=310bp MDDCALHRDYHASMTDAMFMESLERRLAPAFKKLFGDKKMILVLDNASYHback to top mRNA from alignment at S-dermatodea_contig12266:4810..6984+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12266.1424.1 ID=mRNA_S-dermatodea_contig12266.1424.1|Name=mRNA_S-dermatodea_contig12266.1424.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2175bp|location=Sequence derived from alignment at S-dermatodea_contig12266:4810..6984+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12266:4810..6984+ >mRNA_S-dermatodea_contig12266.1424.1 ID=mRNA_S-dermatodea_contig12266.1424.1|Name=mRNA_S-dermatodea_contig12266.1424.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at S-dermatodea_contig12266:4810..6984+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |