prot_S-dermatodea_contig1225.1416.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1225.1416.1
Unique Nameprot_S-dermatodea_contig1225.1416.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length733
Homology
BLAST of mRNA_S-dermatodea_contig1225.1416.1 vs. uniprot
Match: A0A836CEG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG6_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.440e-39
Identity = 151/509 (29.67%), Postives = 228/509 (44.79%), Query Frame = 0
Query:    7 APILNAGFRAVLAEASKRGVLKPPYGRTAMPDPNKIIEDDPFGSTGEENGEADENDAETKGDDRRGSXXXXXXXXXXXXXXXXKLLEYKFDYGFNPLVFLGDFLRRNNPAAIQARREKRIADLAYLRQRAVKGLDREDALTELRALVIHRCMGLVHGPIVGDVSDCGGLVWAKTFRPVGQLMVDLSRHEDFRT--VCRQGSTKADRSTDCLAVVEFDELAPNTTWHHRTYLHNPRKGFNGPAAGFCTKGTFSTLPERDGDAERV-FRFVVFSLHGLGRKRVAAERRDEIEGACSAICAVEPKVCVVLGE-------PSTPRGAK-----TEKRTLCPEGFGELQETVSRIPALSCLMRSYGFLTAPGILRNASSKRQKVRIRCRKDRRSKPKREGSRAEGAIDSCAKKRGSARAGGNPEGGGDKVTAAP-VPDWALRCPESWGSRMLGLS--AEMFLIDARSGSVGEEQLAWVTEAVEESNCTWKLIACGVPVGFQVAPRDRATSTDED 497
            A +L+ G RA+LAEA +  V++PPYGR+ +PDP K++E  P                     +    X X    XXXXXXXX  L+ YK++YGFNPLV+LG++L + +P  +QA +E +  +         +   R++A  +LR L   R  G+V GP+VG +   GG++WAKT R  G L + L   + F    +    +   D  ++C A +    LAP T +H+R  +  P  GF G   G  T+GTF TLP     A R    F+ FS   L    ++        G  + + A EP  C+ LG+        S P G +     TE R      +      + + P L  L+RS GFLTA    R   +                   +GS   GA  SC         G + +   D + A   V D+     +  G  M+ LS   E+++++ R+G++       + +A+  S  TWKL+A G  +     P     +T  D
Sbjct:  694 ATLLDEGIRALLAEAQRLDVVQPPYGRSVIPDPRKVLEPTP---------------------EXXXXXVXLQVTXXXXXXXXNALMAYKYEYGFNPLVYLGEWLLQRDPVRLQAEKEAQEREQQKEELAKAQSAVRKEAFAQLRDLTARRRSGVVAGPVVGAIDAQGGVLWAKTLR-TGTLQLQLCADDGFAPEHILLTDTVDVDIMSECSARIPLGGLAPETPYHYRVCVDKPSHGFYGIDGGCFTQGTFRTLPAPSNRAARSELTFMGFSSDALVDHAMS--------GVFAGMLASEPNFCLFLGDMTAGTALSSRPGGFRGKLPPTEGREDRVRSYRAFHAMIEQCPPLRQLVRSVGFLTAWDDSRALHA--------------HTGSNDGSSKAGAAGSCG------TGGVSQDATVDTMAALQLVADYWPVHGKGSGFSMVTLSPGVELYVLETRAGTLPNASAQQLKKAILASTATWKLVAVGTSLSAPPGPAPSGFTTVSD 1152          
BLAST of mRNA_S-dermatodea_contig1225.1416.1 vs. uniprot
Match: A0A7S2MF24_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MF24_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.630e-18
Identity = 65/222 (29.28%), Postives = 102/222 (45.95%), Query Frame = 0
Query:   93 EYKFDYGFNPLVFLGDFLRRNNPAAIQARREKRIADLAYLRQRAVKGLDREDALTELRALVIHRCMGLVHGPIVGDVSDCGGLVWAKTFRPVGQLMVDLSRHEDFRTVCRQGSTKADRSTDCLAVVEFDELAPNTTWHHRTYLHNPRKGFNGPAA--GFCTKGTFSTLPERDGDAERVFRFVVFSLHGLGRKRVAAERRDEIEG-ACSAICAVEPKVCVVLG 311
            ++ +++GFNP+V LG++LR NNP  I+ RR ++   +AYL++R    L  E     + A V   C G+  GP+ G VS     +WA +  P GQ++ ++S  EDF  +  +   + D        V+   L P +  ++R YL N  KG        G   +G  +TLP+ + +    F  V   L   G     A  R       C +I A +    V  G
Sbjct:    8 KFIYEFGFNPVVQLGNYLRINNPVFIEKRRNQKAEAVAYLQKRGQAALKIETTFQSILARVKTMCSGITLGPVCGSVSYDSVKLWAASKSP-GQIIFEISYQEDFAALSDRVGVEVDDEIGLTGCVQIGHLHPASVVYYRAYLEND-KGSTPIRLDRGEFIRGKVTTLPDPEDEVNLEFTVVGSPLFTKGHPLAGAIGRSATWARTCESIIASDSSFTVFNG 227          
BLAST of mRNA_S-dermatodea_contig1225.1416.1 vs. uniprot
Match: A0A7S3XL53_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL53_HETAK)

HSP 1 Score: 88.6 bits (218), Expect = 1.180e-16
Identity = 56/184 (30.43%), Postives = 99/184 (53.80%), Query Frame = 0
Query:   17 VLAEASKRGVLKPPYGRTAMPDPNKIIEDDPFGSTGEENGEADENDAETKGDDRRGSXXXXXXXXXXXXXXXXKLLEYKFDYGFNPLVFLGDFLRRNNPAAIQARREKRIADLAYLRQRAVKGLDREDALTELRALVIHRCMGLVHGPIVGDVSDCGGLVWAKTFRPVGQLMVDLSRHEDFRTV 200
            +L +  +  +L PPYGR  +    +  E+D   S+ +E+GE   +++    +D +                      +K+DYGFNPLV+LG +L++NNP  I  +++++   LAYL++RA   L +++   +L+  ++    G+  GP+ G  +    + WAKT +P G L+V +S +EDFR V
Sbjct:    3 LLKKVIELDILDPPYGRPHVAKFKE--EEDESDSSSDEDGETSSDESTVDLEDPK----------------------FKYDYGFNPLVYLGTYLKKNNPIFISQKQKEKENSLAYLQKRADHALRQQEIALQLQEQMVRLRSGIQQGPVCGGATADSIVFWAKTTKP-GNLVVQVSDYEDFRYV 161          
BLAST of mRNA_S-dermatodea_contig1225.1416.1 vs. uniprot
Match: A0A7S3GMX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GMX5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 7.020e-14
Identity = 61/217 (28.11%), Postives = 103/217 (47.47%), Query Frame = 0
Query:    9 ILNAGFRAVLAEASKRGVLKPPYGRTAMPDPNKIIEDDPFGSTGEENGEADENDAETKGDDRRGSXXXXXXXXXXXXXXXXKLLEYKFDYGFNPLVFLGDFLRRNNPAAIQARREKRIADLAYLRQRAVKGLDREDALTELRALVIHRCMGLVHGPIVGDVSDCGGLVWAKTFRPVGQLMVDLSRHEDFRTVCRQGSTKADRSTDCLAVVEFDELAP 225
            I++ G   +LAEA K+  L PPYGR A P P  +I +D F     ++G    +D E                            E+KF+YGF+PL FL DF+  ++P +++ RR+K+IA   +L+ RA     +     +L  L   +  G++ GPI+   S    +V  K  + +G+++  +S+  DF+ V ++     D   D   V   +++ P
Sbjct:   14 IVHDGIAKLLAEAKKKDCLDPPYGREAFPTP--LITEDQF----IQDGALQSDDVEP---------------------------EFKFEYGFDPLKFLSDFIVWSHPNSVEDRRQKKIAAAKFLQLRADHARLQLSISRDLSQLANDQSSGILWGPIITPTSSTSVMVSCKPIK-LGKVIFQISKFRDFKEVLQREEVFVDSLNDESEVATLEDILP 196          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1225.1416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CEG6_9STRA3.440e-3929.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2MF24_9STRA5.630e-1829.28Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3XL53_HETAK1.180e-1630.43Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3GMX5_9STRA7.020e-1428.11Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43606:SF1coord: 162..278
NoneNo IPR availablePANTHERPTHR43606FAMILY NOT NAMEDcoord: 453..498
NoneNo IPR availablePANTHERPTHR43606FAMILY NOT NAMEDcoord: 162..278
NoneNo IPR availablePANTHERPTHR43606:SF1coord: 453..498

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1225contigS-dermatodea_contig1225:6425..13253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1225.1416.1mRNA_S-dermatodea_contig1225.1416.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1225 6425..13253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1225.1416.1 ID=prot_S-dermatodea_contig1225.1416.1|Name=mRNA_S-dermatodea_contig1225.1416.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=733bp
LDLASVAPILNAGFRAVLAEASKRGVLKPPYGRTAMPDPNKIIEDDPFGS
TGEENGEADENDAETKGDDRRGSSGSGGGDEDDEDDDDDKLLEYKFDYGF
NPLVFLGDFLRRNNPAAIQARREKRIADLAYLRQRAVKGLDREDALTELR
ALVIHRCMGLVHGPIVGDVSDCGGLVWAKTFRPVGQLMVDLSRHEDFRTV
CRQGSTKADRSTDCLAVVEFDELAPNTTWHHRTYLHNPRKGFNGPAAGFC
TKGTFSTLPERDGDAERVFRFVVFSLHGLGRKRVAAERRDEIEGACSAIC
AVEPKVCVVLGEPSTPRGAKTEKRTLCPEGFGELQETVSRIPALSCLMRS
YGFLTAPGILRNASSKRQKVRIRCRKDRRSKPKREGSRAEGAIDSCAKKR
GSARAGGNPEGGGDKVTAAPVPDWALRCPESWGSRMLGLSAEMFLIDARS
GSVGEEQLAWVTEAVEESNCTWKLIACGVPVGFQVAPRDRATSTDEDAAL
QHAAAAKIQATMRSRLVSPKPSTKSTTPAAVATKSVAPVPAAAAAATLDG
VSSTASGKECDRPLSPVDGGDGLGAENRATGECVGGNTPWVAMQMQDMVS
QLHARGCANVVLITPARSRPHALSFFSGHEAEGRFPVYELGCCGLLPPHR
SHDATADSEATEPCPDLAPSVLMPQAASPAFSEGVAGMACSISVGEGCEG
QEGGGGANDGLSFVVSGQSGEEISSLRLVAAV*
back to top