prot_S-dermatodea_contig12243.1412.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12243.1412.1
Unique Nameprot_S-dermatodea_contig12243.1412.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length192
Homology
BLAST of mRNA_S-dermatodea_contig12243.1412.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.330e-18
Identity = 51/78 (65.38%), Postives = 55/78 (70.51%), Query Frame = 0
Query:  115 PVSRSAANTGTGGXRRIXXXXXXXXXXXXRSAVQEDVMEAPTAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQV 192
            PVSRSAAN GTG  RR               A  ++ +EAP  PRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQ+
Sbjct:   76 PVSRSAANAGTGAGRREARPRSLREEGGG-GAGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQL 152          
BLAST of mRNA_S-dermatodea_contig12243.1412.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.680e-18
Identity = 51/78 (65.38%), Postives = 55/78 (70.51%), Query Frame = 0
Query:  115 PVSRSAANTGTGGXRRIXXXXXXXXXXXXRSAVQEDVMEAPTAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQV 192
            PVSRSAAN GTG  RR               A  ++ +EAP  PRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQ+
Sbjct:   93 PVSRSAANAGTGAGRRRQRGEEGGGR-----AGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQL 165          
BLAST of mRNA_S-dermatodea_contig12243.1412.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 9.820e-11
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0
Query:  155 PTAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQV 192
            PTA  RRRGRKG+SIYRGVCVTREGKWRAVIYKERKQ+
Sbjct:   18 PTA--RRRGRKGKSIYRGVCVTREGKWRAVIYKERKQL 53          
BLAST of mRNA_S-dermatodea_contig12243.1412.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.290e-9
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:  153 EAPTAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQV 192
            +APT   RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQ+
Sbjct:   91 KAPTT-HRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQL 129          
BLAST of mRNA_S-dermatodea_contig12243.1412.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.820e-5
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 0
Query:  170 YRGVCVTREGKWRAVIYKERKQV 192
            YRGVCVTREGKWRAVIYKERKQ+
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQL 23          
BLAST of mRNA_S-dermatodea_contig12243.1412.1 vs. uniprot
Match: A0A835ZDL0_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL0_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 3.760e-5
Identity = 29/48 (60.42%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  145 SAVQEDVMEAPTAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQV 192
            SA   D    P     RRGRKG+SIYRGV  TREGK+RAV+Y ERKQ+
Sbjct:  114 SAALRDANNRP-----RRGRKGKSIYRGVSHTREGKYRAVLYVERKQI 156          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12243.1412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5LCQ5_9PHAE1.330e-1865.38AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D7FZ71_ECTSI1.680e-1865.38AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CI56_9STRA9.820e-1189.47AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5JUY3_9PHAE1.290e-980.00AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A836CH07_9STRA1.820e-595.65AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A835ZDL0_9STRA3.760e-560.42AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12243contigS-dermatodea_contig12243:1992..6835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12243.1412.1mRNA_S-dermatodea_contig12243.1412.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12243 1992..6983 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12243.1412.1 ID=prot_S-dermatodea_contig12243.1412.1|Name=mRNA_S-dermatodea_contig12243.1412.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=192bp
MRQYLYFAGGRGLGPGRGGGTPFAPSVSHLRSHDSERIKSSHVSERTSPS
SRPPPPPQPPTPAPRARRSFLSQKKQNYVTKMNTGTSSEEDVLDRPSHSS
RGASATASASRGAGPVSRSAANTGTGGGRRISGGGGGSRGGGGRSAVQED
VMEAPTAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQV
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