mRNA_S-dermatodea_contig1222.1390.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: D7FTW8_ECTSI (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW8_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 4.780e-15 Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 1
Query: 1 GKREWTGEWSDKSDRWSDSVREELGWSKKNDGTFWMTW 114
GKREW G+W +KS++WSDSVR ELGWS+KNDGTFWMTW
Sbjct: 487 GKREWIGDWGEKSEKWSDSVRAELGWSEKNDGTFWMTW 524
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: A0A6H5JHG4_9PHAE (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHG4_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 7.930e-14 Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 1 GKREWTGEWSDKSDRWSDSVREELGWSKKNDGTFWMTW 114
GKREW G+W +KS++WSD VR ELGWS++NDGTFWMTW
Sbjct: 123 GKREWIGDWGEKSEKWSDRVRAELGWSEQNDGTFWMTW 160
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: A0A5B8MKZ2_9CHLO (Calpain-type cysteine proteinase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MKZ2_9CHLO) HSP 1 Score: 58.2 bits (139), Expect = 8.260e-9 Identity = 22/38 (57.89%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 1 GKREWTGEWSDKSDRWSDSVREELGWSKKNDGTFWMTW 114
G+REW G+WSDKSD+W+ ++ +LG ++KNDGTFWM++
Sbjct: 455 GQREWLGDWSDKSDKWTSTLHAKLGRTEKNDGTFWMSY 492
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: A0A7S3FQR2_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FQR2_9CHLO) HSP 1 Score: 57.4 bits (137), Expect = 1.550e-8 Identity = 22/38 (57.89%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 GKREWTGEWSDKSDRWSDSVREELGWSKKNDGTFWMTW 114
GKREW G++SD+S++W++++R LG + KNDGTFWM W
Sbjct: 474 GKREWNGDFSDESEKWTNALRARLGKTSKNDGTFWMPW 511
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: I7MG72_TETTS (Calpain family cysteine protease n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MG72_TETTS) HSP 1 Score: 54.3 bits (129), Expect = 1.890e-7 Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 1
Query: 1 GKREWTGEWSDKSDRWSDSVREELGWSKKNDGTFWMT 111
G +EWTG+WSD SD+W+ +R+ L KNDGTFWM+
Sbjct: 339 GMKEWTGDWSDNSDKWNPVLRQRLNVESKNDGTFWMS 375
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: A0A1J4K3M5_9EUKA (Calpain catalytic domain-containing protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4K3M5_9EUKA) HSP 1 Score: 52.4 bits (124), Expect = 9.030e-7 Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 1
Query: 1 GKREWTGEWSDKSDRWSDSVREELGWSKKNDGTFWM 108
G EWTG++SD SD+W++S+++ELG+ NDG FWM
Sbjct: 272 GNFEWTGDYSDTSDKWTESLKKELGFENSNDGAFWM 307
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: A0A7S3DFV8_9EUKA (Hypothetical protein n=7 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFV8_9EUKA) HSP 1 Score: 51.6 bits (122), Expect = 1.690e-6 Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 1 GKREWTGEWSDKSDRWSD--SVREELGWSKKNDGTFWMTW 114
G++EW G+WSDKS++W +V++ L KNDGTFWM W
Sbjct: 785 GRKEWQGDWSDKSEKWRKYPAVKKTLNHEDKNDGTFWMAW 824
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: UPI0004F4711C (calpain-like cysteine peptidase n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F4711C) HSP 1 Score: 51.6 bits (122), Expect = 1.690e-6 Identity = 24/37 (64.86%), Postives = 25/37 (67.57%), Query Frame = 1
Query: 10 EWTGEWSDKSDRWSDS--VREELGWSKKNDGTFWMTW 114
EWTG WSDKSD+W VR SKKNDGTFWM W
Sbjct: 461 EWTGAWSDKSDKWKSHPLVRRACKPSKKNDGTFWMEW 497
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: A0A7S1QAZ2_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1QAZ2_NEODS) HSP 1 Score: 51.6 bits (122), Expect = 1.690e-6 Identity = 18/35 (51.43%), Postives = 26/35 (74.29%), Query Frame = 1
Query: 10 EWTGEWSDKSDRWSDSVREELGWSKKNDGTFWMTW 114
EW G WSD SD+W+ +++E+G+ +DGTFWM W
Sbjct: 202 EWNGAWSDDSDKWTQEIKDEVGFYAGDDGTFWMAW 236
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Match: A0A077ZPJ5_STYLE (Calpain family cysteine protease containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZPJ5_STYLE) HSP 1 Score: 51.2 bits (121), Expect = 2.310e-6 Identity = 19/37 (51.35%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 1 GKREWTGEWSDKSDRWSDSVREELGWSKKNDGTFWMT 111
G +EWTG+WSDKSD+W+ +++E+LG+ K DG F+++
Sbjct: 283 GFKEWTGDWSDKSDKWTPALKEKLGYEDKEDGVFFIS 319 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1222.1390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1222.1390.1 >prot_S-dermatodea_contig1222.1390.1 ID=prot_S-dermatodea_contig1222.1390.1|Name=mRNA_S-dermatodea_contig1222.1390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=38bp GKREWTGEWSDKSDRWSDSVREELGWSKKNDGTFWMTWback to top mRNA from alignment at S-dermatodea_contig1222:21460..21573- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1222.1390.1 ID=mRNA_S-dermatodea_contig1222.1390.1|Name=mRNA_S-dermatodea_contig1222.1390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=114bp|location=Sequence derived from alignment at S-dermatodea_contig1222:21460..21573- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1222:21460..21573- >mRNA_S-dermatodea_contig1222.1390.1 ID=mRNA_S-dermatodea_contig1222.1390.1|Name=mRNA_S-dermatodea_contig1222.1390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=228bp|location=Sequence derived from alignment at S-dermatodea_contig1222:21460..21573- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |