mRNA_S-dermatodea_contig1165.1051.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: D8LDN4_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN4_ECTSI) HSP 1 Score: 194 bits (493), Expect = 1.030e-57 Identity = 104/139 (74.82%), Postives = 114/139 (82.01%), Query Frame = 3
Query: 3 VMSGGESGMGACLSEVETLAFLKVKREEAGLTH--ARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSL-------TAGAMK---PPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENVALYP 383
V+SGGESGMGACL EVETLAFLKVKR+EAGLT +RFAELASWFYRRSA+GGVDHVCLVFRGGGLSLREAM+ RSP + TA M P LL+W EVV VARGLLEG+AFLH VGL+HADIKP+NVALYP
Sbjct: 140 VLSGGESGMGACLHEVETLAFLKVKRQEAGLTRERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPPISTAQSGVTASNMPSSAPVLLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYP 278
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: A0A7S3UQ19_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQ19_HETAK) HSP 1 Score: 58.9 bits (141), Expect = 1.990e-7 Identity = 44/120 (36.67%), Postives = 62/120 (51.67%), Query Frame = 3
Query: 39 LSEVETLAFLKVK----REEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENVALYPS 386
L EVE L +L +K +E G FA L +W R ++ + LVF GGG+SLR+ + +S L A EV+ + L+ G+ F H +GLIH DIKPEN+ L P+
Sbjct: 35 LKEVEILTYLHLKAGYKNDEDGKNSLFFAPLVAW--REDPT--LNTLFLVFPGGGVSLRDFLESQSEHLQA------------EEVLELFHCLVLGLDFFHNLGLIHTDIKPENIILTPA 138
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: UPI0010359C57 (serine/threonine-protein kinase AFC1-like isoform X1 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010359C57) HSP 1 Score: 53.5 bits (127), Expect = 1.590e-5 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 3
Query: 33 ACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENVALYPS 386
A + E++ L K+ R + G T R ++ +WF R +HVC+VF G SL + + + S S+ T V R LLE VAF+H + LIH D+KPEN+ L S
Sbjct: 149 AAMIEIDVLQ--KLSRHDIGGT--RCVQIRNWFDYR------NHVCIVFEKLGPSLYDFLRKNS-----------YRSFPTDLVREFGRQLLESVAFMHDLHLIHTDLKPENILLVSS 245
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: D7TQF1_VITVI (Protein kinase domain-containing protein n=11 Tax=Vitis TaxID=3603 RepID=D7TQF1_VITVI) HSP 1 Score: 52.0 bits (123), Expect = 5.390e-5 Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = 3
Query: 33 ACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENVALYPSN 389
A + E++ L K+ R + G T R ++ +WF R +H+C+VF G SL + + + S S+ V + R LLE VAF+H + LIH D+KPEN+ L S+
Sbjct: 130 AAMIEIDVLQ--KLARHDVGGT--RCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNS-----------YRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSSD 227
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: A0A8B7BYM7_PHODC (serine/threonine-protein kinase AFC1-like isoform X1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A8B7BYM7_PHODC) HSP 1 Score: 52.0 bits (123), Expect = 5.390e-5 Identity = 37/118 (31.36%), Postives = 58/118 (49.15%), Query Frame = 3
Query: 33 ACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENVALYPS 386
A + E++ L L +A ++ R+ ++ +WF R +H+C+VF G SL + + S S+ V + R LLE VAF+H + LIH D+KPEN+ L S
Sbjct: 134 AAMIEIDVLQRLA----KADISGTRYVQIRNWFDYR------NHICIVFEKLGPSLYDFLRRNS-----------YRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSS 230
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: B9IIV2_POPTR (Protein kinase domain-containing protein n=15 Tax=Saliceae TaxID=238069 RepID=B9IIV2_POPTR) HSP 1 Score: 52.0 bits (123), Expect = 5.410e-5 Identity = 38/118 (32.20%), Postives = 60/118 (50.85%), Query Frame = 3
Query: 33 ACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENVALYPS 386
A ++E++ L ++ R + G T R ++ +WF R +H+C+VF G SL + + + S S+ V + R LLE VAF+H + LIH D+KPEN+ L S
Sbjct: 134 AAMTEIDVLQ--RLARHDIGST--RCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNS-----------YRSFPIDLVRELGRQLLESVAFMHDLHLIHTDLKPENILLVSS 230
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: A0A438DWM9_VITVI (Serine/threonine-protein kinase AFC1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DWM9_VITVI) HSP 1 Score: 52.0 bits (123), Expect = 5.440e-5 Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = 3
Query: 33 ACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENVALYPSN 389
A + E++ L K+ R + G T R ++ +WF R +H+C+VF G SL + + + S S+ V + R LLE VAF+H + LIH D+KPEN+ L S+
Sbjct: 130 AAMIEIDVLQ--KLARHDVGGT--RCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNS-----------YRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSSD 227
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: A0A833VES5_9POAL (Serine/threonine-protein kinase AFC1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VES5_9POAL) HSP 1 Score: 51.6 bits (122), Expect = 7.350e-5 Identity = 38/119 (31.93%), Postives = 60/119 (50.42%), Query Frame = 3
Query: 33 ACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENVALYPSN 389
A + E++ L K+ R + +T +R ++ +WF R +H+C+VF G SL + + S S+ V AR +LE VAF+H + LIH D+KPEN+ L S+
Sbjct: 141 AAMIEIDVLQ--KLSRHD--ITGSRCVQIRTWFDYR------NHICIVFERLGPSLYDFLRRNS-----------YRSFPIDLVREFARQILESVAFMHDLRLIHTDLKPENILLISSD 238
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: A0A0K9NIQ1_ZOSMR (Protein kinase superfamily protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NIQ1_ZOSMR) HSP 1 Score: 51.6 bits (122), Expect = 7.370e-5 Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = 3
Query: 33 ACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENV 371
A L E+E L K+ + + G TH ++ WF R +H+C+VF G SL + + + + P L W+ G R LLE VAF+H + LIH D+KPEN+
Sbjct: 136 AALIEIEVLQ--KLAKHDIGGTHC--VQIRHWFDYR------NHICIVFEKLGPSLYDFLRKNNYCSF-----PIDLVWELG------RQLLESVAFMHELCLIHTDLKPENI 227
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Match: UPI001CFBB6AF (serine/threonine-protein kinase AFC2-like isoform X1 n=6 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CFBB6AF) HSP 1 Score: 51.6 bits (122), Expect = 7.370e-5 Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 3
Query: 33 ACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGVDHVCLVFRGGGLSLREAMAERSPSLTAGAMKPPLLSWDTGEVVAVARGLLEGVAFLHLVGLIHADIKPENV 371
A ++E++ L LK K +++G R ++ SWF +H+C+VF G SL + + +K S+ V + R LLE VAF+H + LIH D+KPEN+
Sbjct: 137 AAMTEIDVLQLLK-KNDKSG---RRCVQIRSWF------DYCNHICIVFEMLGPSLYDFL-----------LKNNYRSFPVDLVREIGRQLLECVAFMHELRLIHTDLKPENI 228 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1165.1051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1165.1051.1 >prot_S-dermatodea_contig1165.1051.1 ID=prot_S-dermatodea_contig1165.1051.1|Name=mRNA_S-dermatodea_contig1165.1051.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=142bp MSGGESGMGACLSEVETLAFLKVKREEAGLTHARFAELASWFYRRSAIGGback to top mRNA from alignment at S-dermatodea_contig1165:923..1610+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1165.1051.1 ID=mRNA_S-dermatodea_contig1165.1051.1|Name=mRNA_S-dermatodea_contig1165.1051.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=688bp|location=Sequence derived from alignment at S-dermatodea_contig1165:923..1610+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1165:923..1610+ >mRNA_S-dermatodea_contig1165.1051.1 ID=mRNA_S-dermatodea_contig1165.1051.1|Name=mRNA_S-dermatodea_contig1165.1051.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at S-dermatodea_contig1165:923..1610+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |