mRNA_S-dermatodea_contig11646.1047.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A6H5JYW1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW1_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.430e-50 Identity = 90/130 (69.23%), Postives = 108/130 (83.08%), Query Frame = 2
Query: 5 GGLGKVLLADFGSSFRVKEGSAEGGKGFTKA--YTAAYSAPEVVSNSTAVDQKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSEPDWDGLEPQASQLIRQMLARDPADRPSAREVLQNSWLR 388
G +GKVLLADFGSSFR++ GG+G K YT AYSAPEVV NS VDQKADVWSLGVIAYV+V GHHPFDP SEA DEEI ESI++SEPDW+G++ +A+ LIR+ML+R+P DRPSA+EVLQ+SWL+
Sbjct: 279 GSVGKVLLADFGSSFRLR-----GGRGHKKVKEYTIAYSAPEVVENSAEVDQKADVWSLGVIAYVLVVGHHPFDPTSEADDEEITESILHSEPDWEGVDLKAATLIRRMLSRNPEDRPSAQEVLQSSWLQ 403
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A835Z8F3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F3_9STRA) HSP 1 Score: 110 bits (275), Expect = 7.700e-26 Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 2
Query: 17 KVLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVDQKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSEPDWDG-----LEPQASQLIRQMLARDPADRPSAREVLQNSW 382
+V+LADFGS+F + ++ YTAAYSAPEV+ S A+D+KAD+WS+GV+ YV++ G HPFD DEE+ IV EPD++ + P A L+R+M+++D RPSA+E L ++W
Sbjct: 260 EVMLADFGSAFSKNHVTG------SRDYTAAYSAPEVLLRSCAIDEKADIWSMGVLMYVLLSGRHPFDTHLHQDDEEVERRIVGKEPDYNAHAMRHVGPVAKDLLRRMMSKDRRQRPSAKEALSHAW 380
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A835ZES4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES4_9STRA) HSP 1 Score: 107 bits (268), Expect = 6.000e-25 Identity = 59/133 (44.36%), Postives = 89/133 (66.92%), Query Frame = 2
Query: 5 GGLGKVLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVDQKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSEPD-----WDGLEPQASQLIRQMLARDPADRPSAREVLQNSWLR 388
GGL V LADFGS+FR + G K +T TAAYS PEVVS + A + ADV+SLGV+AY+++ G HPFDP+ +A++E+++ IV+ EPD W ++ A L+R+ L++ P+ RP+A +L + W++
Sbjct: 228 GGL-TVKLADFGSAFRTRAGVPRR-KDYTT--TAAYSPPEVVSGAAAATEAADVFSLGVVAYILLTGRHPFDPSGDASEEDVLARIVSDEPDFSDAAWGDVDAAARDLVRRALSKAPSARPTASAMLAHPWVQ 356
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A835ZCD7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD7_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.260e-23 Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 2
Query: 2 AGGLG-KVLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVDQKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSEPD-----WDGLEPQASQLIRQMLARDPADRPSAREVLQNSWL 385
+GG G V L DFGS+FRV G K +YTA YS PEVV+ + DVW+LGV+AY+++ G HPFDP+ + + E++ +V++EPD WD ++ A L++ L +DPA RP+A ++L + W+
Sbjct: 152 SGGSGLSVKLVDFGSAFRVGTGPP---KRKEWSYTAVYSPPEVVAGTAEASAAGDVWALGVVAYILLLGVHPFDPSGDTCEAEVLRRVVSAEPDYDDPAWDLIDAGAKDLVQGALNKDPALRPTAAQLLAHPWV 282
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: D7FVW8_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW8_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.740e-22 Identity = 55/128 (42.97%), Postives = 81/128 (63.28%), Query Frame = 2
Query: 17 KVLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVD-QKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSEPDWDGLE---PQASQLIRQMLARDPADRPSAREVLQNSWLR 388
+V LADFGS+FR + + YTAAYSAPEV+S + D ++ D+W+LGV+ +V++ G HPF S+ ++ E+ + EPD L P+A L+R++LARDP DRPSA ++L + WLR
Sbjct: 257 EVRLADFGSAFRQYRQISS-----ARDYTAAYSAPEVLSRQSVDDYRQVDMWALGVVMWVLLTGEHPFGAHSDLSEAELARRVAEMEPDLKALRHVSPEAKDLVRRLLARDPEDRPSALQLLSHPWLR 379
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A6H5KFB2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB2_9PHAE) HSP 1 Score: 102 bits (253), Expect = 3.020e-22 Identity = 55/128 (42.97%), Postives = 81/128 (63.28%), Query Frame = 2
Query: 17 KVLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVD-QKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSEPDWDGLE---PQASQLIRQMLARDPADRPSAREVLQNSWLR 388
+V LADFGS+FR + + YTAAYSAPEV+S + D ++ D+W+LGV+ +V++ G HPF S+ ++ E+ + EPD L P+A L+R++LARDP DRPSA ++L + WLR
Sbjct: 392 EVRLADFGSAFRQYRQISS-----ARDYTAAYSAPEVLSRQSVDDYRQVDMWALGVVMWVLLTGEHPFGAHSDLSEAELARRVAEMEPDLKALRHVSPEAKDLVRRLLARDPEDRPSALQLLSHPWLR 514
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A397C960_9STRA (Protein kinase domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C960_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.820e-19 Identity = 50/130 (38.46%), Postives = 77/130 (59.23%), Query Frame = 2
Query: 17 KVLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVDQKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSEPD------WDGLEPQASQLIRQMLARDPADRPSAREVLQNSWLR 388
+++L DFG SFR EG G + T AY+APEV++ S V D+W+LGV+ +V++ G+HPFD ASE +D + +I+ + D W + A LIR+++ DPA R +A +VL + WL+
Sbjct: 192 RMILIDFGLSFRASEGGCHSWDG---SGTVAYAAPEVLNQSANVTSAIDMWALGVVLFVVLAGYHPFDVASELSDAAVRLAILQGDFDFNHAASWAHISDDAKDLIRRLIVVDPAARLTAEQVLAHPWLK 318
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A7S2XVS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVS7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.600e-18 Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 2
Query: 20 VLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVDQKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSE-----PDWDGLEPQASQLIRQMLARDPADRPSAREVLQNSWLR 388
+ LADFGS+F + + + T AYSAPEV+ D + D+WSLGV+ ++++ G HPFDP ATDE++ E ++ E DW PQA L++++L D RP+A EVL++ W +
Sbjct: 238 IRLADFGSAFFLSD--LDDSPKNAPTGTVAYSAPEVLRGKVH-DARCDLWSLGVLLFIILTGVHPFDPDHTATDEKVKERVLKGELHFDEEDWREFSPQAKDLVKRLLTFDVDKRPTAEEVLEHPWFQ 362
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A3M6VSE3_9STRA (Protein kinase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSE3_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.210e-17 Identity = 53/127 (41.73%), Postives = 71/127 (55.91%), Query Frame = 2
Query: 20 VLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVDQKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMESIVNSEPD-----WDGLEPQASQLIRQMLARDPADRPSAREVLQNSWL 385
+ L DFG SF++ E G A T AY+ PE + N DVWSLGV+ Y+++ G HPFDP+ +ATDEEI E I+ D W + A L+RQML DP R SA +VL++ W+
Sbjct: 222 LRLIDFGQSFQLDH---ENGHKMN-ACTTAYAPPEFI-NHRETGCAMDVWSLGVVLYIVLCGLHPFDPSDDATDEEIQERILRGNFDQESIGWLCMSDSARNLVRQMLTVDPEKRISAAQVLEHKWI 343
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Match: A0A7S1BN47_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN47_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 4.810e-16 Identity = 44/127 (34.65%), Postives = 77/127 (60.63%), Query Frame = 2
Query: 11 LGKVLLADFGSSFRVKEGSAEGGKGFTKAYTAAYSAPEVVSNSTAVDQKADVWSLGVIAYVMVKGHHPFDPASEATDEEIMES--IVNSEPDWDGLEPQASQLIRQMLARDPADRPSAREVLQNSWL 385
LG+V ++DFG + R+++ G+ T T Y APE++S + A D DVWS G+I ++M+ G+HPF ++A E++++S + P W+ + A L+++M+ P R +A+E L++SWL
Sbjct: 153 LGRVKISDFGMAKRIEKS----GRLNTYCGTLIYMAPEILSGA-AYDSSIDVWSAGIIIFIMLSGYHPFHGKNDAECEKMIQSGRLYFHPPSWEDISSNAITLVKEMICPCPLQRSTAKEALKSSWL 274 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11646.1047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11646.1047.1 >prot_S-dermatodea_contig11646.1047.1 ID=prot_S-dermatodea_contig11646.1047.1|Name=mRNA_S-dermatodea_contig11646.1047.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=74bp MVKGHHPFDPASEATDEEIMESIVNSEPDWDGLEPQASQLIRQMLARDPAback to top mRNA from alignment at S-dermatodea_contig11646:2336..3231- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11646.1047.1 ID=mRNA_S-dermatodea_contig11646.1047.1|Name=mRNA_S-dermatodea_contig11646.1047.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=896bp|location=Sequence derived from alignment at S-dermatodea_contig11646:2336..3231- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11646:2336..3231- >mRNA_S-dermatodea_contig11646.1047.1 ID=mRNA_S-dermatodea_contig11646.1047.1|Name=mRNA_S-dermatodea_contig11646.1047.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at S-dermatodea_contig11646:2336..3231- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |