prot_S-dermatodea_contig1141.912.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1141.912.1
Unique Nameprot_S-dermatodea_contig1141.912.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length183
Homology
BLAST of mRNA_S-dermatodea_contig1141.912.1 vs. uniprot
Match: A0A6H5JZS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZS7_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 5.120e-7
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    4 GAAVLAHGLRENSTLENLQVNGNAVGWSGGRALFRTANSSEIARVIGIRGCDLSE----GDLNTFDPRFPGG 71
            GA V+A  L  N  LE L+++GN++G++GGR L R+ N   ++R +G++ C L      GD   FDP FP G
Sbjct:  198 GALVIAQALENNDRLETLRLDGNSIGFNGGRTLVRSLNYWTLSRTLGLKNCMLESRARVGDC--FDPLFPTG 267          
BLAST of mRNA_S-dermatodea_contig1141.912.1 vs. uniprot
Match: A0A7S0WJQ1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WJQ1_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 1.240e-6
Identity = 34/102 (33.33%), Postives = 55/102 (53.92%), Query Frame = 0
Query:    3 KGAAVLAHGLRENSTLENLQVNGNAVGWSGGRALFRTANSSEIARVIGIRGCDLSEG-----DLNTFDPRFPGGVFSLDLSNQNELAIADDVLL--AASFRT 97
            +   +L  GL+ N+TLE L +NGNAVG  G R L      ++  + +G++G ++S         + F+P  P G ++LDLS   + A+A  +    AA+ RT
Sbjct:   17 EACVMLGEGLKVNATLEELFLNGNAVGDDGARHLMAALKHNKALQFLGLQGSNMSSSARGGHGASDFNPLAPDGSYTLDLSQPADRAVAQQLCAFDAAAQRT 118          
BLAST of mRNA_S-dermatodea_contig1141.912.1 vs. uniprot
Match: D7G2L7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L7_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.020e-5
Identity = 30/80 (37.50%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   29 GWSGGRALFRTANSSEIARVIGIRGCDLSE----GDLNTFDPRFPGGVFSLDLSNQNELAIADDVLLAASFRTGCTLTDV 104
            G+ GGR L R+ N   ++R +G++ C L      GD   FDP FP G +SLD S   + A+A ++L  AS R G +++++
Sbjct:  261 GFDGGRTLVRSLNYWTLSRTLGLKNCMLESRARVGDC--FDPVFPTGKYSLDCSKPYQKAVAFELLRIASTRPGSSVSEI 338          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1141.912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZS7_9PHAE5.120e-741.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0WJQ1_9CHLO1.240e-633.33Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
D7G2L7_ECTSI2.020e-537.50Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 3..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1141contigS-dermatodea_contig1141:8982..13767 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1141.912.1mRNA_S-dermatodea_contig1141.912.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1141 8980..13767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1141.912.1 ID=prot_S-dermatodea_contig1141.912.1|Name=mRNA_S-dermatodea_contig1141.912.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=183bp
SCKGAAVLAHGLRENSTLENLQVNGNAVGWSGGRALFRTANSSEIARVIG
IRGCDLSEGDLNTFDPRFPGGVFSLDLSNQNELAIADDVLLAASFRTGCT
LTDVEHFGSVARGGGVGGDTGTGTRLELVRPSTDAPALQPRSPNNHEQAF
AWSTRGYADLRSTLEGLMVRRSGGSQPWRPPPS
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