prot_S-dermatodea_contig11352.870.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11352.870.1
Unique Nameprot_S-dermatodea_contig11352.870.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length106
Homology
BLAST of mRNA_S-dermatodea_contig11352.870.1 vs. uniprot
Match: D8LBU3_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU3_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 4.880e-44
Identity = 85/98 (86.73%), Postives = 94/98 (95.92%), Query Frame = 0
Query:    8 DESLRKQDEHYLRELRICLREVLSELRKDKRFSMFKQIGDYEGEFMDLNAIRDKLNAEEYLTLDDFEDDLKLMAKEAMEVRDRLKADLARAEAHAAVL 105
            DESL+KQ+EHYLRELRICLREVL ELRKD+RFSMFKQIGDYEGEFMDLN IRDKLNAEEY+TLDDFE+DLKLMA+EA EVRDRLKA+LARAEA+A+ L
Sbjct:  870 DESLKKQEEHYLRELRICLREVLGELRKDRRFSMFKQIGDYEGEFMDLNGIRDKLNAEEYVTLDDFEEDLKLMAEEAKEVRDRLKANLARAEANASAL 967          
BLAST of mRNA_S-dermatodea_contig11352.870.1 vs. uniprot
Match: A0A6H5L3Q2_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q2_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.430e-43
Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = 0
Query:    9 ESLRKQDEHYLRELRICLREVLSELRKDKRFSMFKQIGDYEGEFMDLNAIRDKLNAEEYLTLDDFEDDLKLMAKEAMEVRDRLKADLARAEAHAAVL 105
            ESLRKQ+EHYLRELRICLREVL ELRKD+RFSMFKQIGDYEGEFMDLN IRDKLNAEEY+TLDDFE+DLKLMA+EA EVRDRLKA+LARAE +A+ L
Sbjct:   49 ESLRKQEEHYLRELRICLREVLGELRKDRRFSMFKQIGDYEGEFMDLNGIRDKLNAEEYVTLDDFEEDLKLMAEEAKEVRDRLKANLARAETNASAL 145          
BLAST of mRNA_S-dermatodea_contig11352.870.1 vs. uniprot
Match: A0A7S2DSB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DSB6_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.240e-7
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   15 DEHYLRELRICLREVLSELRKDKRFSMFKQIGDYEG---------EFMDLNAIRDKLNAEEYLTLDDFEDDLKLMAKEA 84
            D H+LRELRICLR VL+++RK+KR+S+F +  D E          E MDL+ +R +++A EYL   DF  D +L+ + A
Sbjct:   49 DAHHLRELRICLRAVLADIRKEKRYSIFARPVDPEQSPGYYQVILEPMDLDTMRARIDAGEYLCASDFIADTRLIKENA 127          
BLAST of mRNA_S-dermatodea_contig11352.870.1 vs. uniprot
Match: A0A4D9DB34_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB34_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 8.820e-7
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 0
Query:   17 HYLRELRICLREVLSELRKDKRFSMF------KQIGDYEGEF---MDLNAIRDKLNAEEYLTLDDFEDDLKLMAKEA 84
            H  RE RICLR++L+EL+KDKR+S F      +++ DY       MDL  +R K++AEEY T D+F  D+ L+   A
Sbjct: 1214 HLRREFRICLRKILAELKKDKRYSYFSSPVDPEEVPDYYSVISHPMDLETMRCKVDAEEYETRDEFRRDVVLIRANA 1290          
BLAST of mRNA_S-dermatodea_contig11352.870.1 vs. uniprot
Match: V4CF06_LOTGI (Bromo domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4CF06_LOTGI)

HSP 1 Score: 52.0 bits (123), Expect = 1.940e-5
Identity = 32/85 (37.65%), Postives = 54/85 (63.53%), Query Frame = 0
Query:   11 LRKQDEHYLRELRICLREVLSELRKDKRFSMFKQIGDYEG---------EFMDLNAIRDKLNAEEYLTLDDFEDDLKLMAKEAME 86
            L+ Q+E  LRELRI LR+VL++L +D++FSMF +  D E          + MD++ +  K++  EY+T++ F  D+ L+ + A+E
Sbjct:  598 LKHQEESTLRELRIFLRDVLTKLGRDRKFSMFTKPVDLEEVPDYLVIVKKPMDMSTMMTKIDLHEYVTVEAFMSDIDLICRNALE 682          
BLAST of mRNA_S-dermatodea_contig11352.870.1 vs. uniprot
Match: A0A1E1X2M1_9ACAR (Putative 26s proteasome regulatory complex atpase rpt2 (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1X2M1_9ACAR)

HSP 1 Score: 50.1 bits (118), Expect = 9.200e-5
Identity = 32/87 (36.78%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    9 ESLRKQDEHYLRELRICLREVLSELRKDKRFSMF------KQIGDYEGEF---MDLNAIRDKLNAEEYLTLDDFEDDLKLMAKEAME 86
            E LR+Q+E  LRELR+ LR++L++L +D+R+SMF      +++ DY       MDL  +  K++  +Y T+  F  D++L+   A+E
Sbjct:  594 ERLRQQEEATLRELRLFLRDILTKLMRDRRYSMFAKPVDAEEVPDYLDVIQQPMDLETMMVKIDLHKYQTVGQFLQDIELICSNALE 680          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11352.870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LBU3_ECTSI4.880e-4486.73AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L3Q2_9PHAE2.430e-4386.60Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2DSB6_9STRA1.240e-744.30Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A4D9DB34_9STRA8.820e-744.16Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
V4CF06_LOTGI1.940e-537.65Bromo domain-containing protein n=1 Tax=Lottia gig... [more]
A0A1E1X2M1_9ACAR9.200e-536.78Putative 26s proteasome regulatory complex atpase ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..101
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 10..105
e-value: 2.8E-12
score: 48.4
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 13..85
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 27..87
e-value: 3.6E-7
score: 30.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11352contigS-dermatodea_contig11352:5180..7210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11352.870.1mRNA_S-dermatodea_contig11352.870.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11352 5178..7210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11352.870.1 ID=prot_S-dermatodea_contig11352.870.1|Name=mRNA_S-dermatodea_contig11352.870.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=106bp
EPQEEPEDESLRKQDEHYLRELRICLREVLSELRKDKRFSMFKQIGDYEG
EFMDLNAIRDKLNAEEYLTLDDFEDDLKLMAKEAMEVRDRLKADLARAEA
HAAVLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain