mRNA_S-dermatodea_contig11085.710.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11085.710.1
Unique NamemRNA_S-dermatodea_contig11085.710.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 1.230e-98
Identity = 152/187 (81.28%), Postives = 163/187 (87.17%), Query Frame = 1
Query:   58 DRRFDERSNGSGPLGS----PTPYMSLPFFKPWFPKPAAGAAESMPNPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMGH 606
            +RR DE     G  GS    P     LPFF PW P+PAAGAA++MP PP L ESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQM+NGR+VPQAP RE ARLAYKQTA+RSLS+GRNFASFSAIFMGSECVIEKMRGK+DMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSA+MDK+MGH
Sbjct:    6 ERRHDECCKQQGTEGSRSLHPQLGSRLPFFLPWVPRPAAGAADAMPTPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.120e-62
Identity = 107/169 (63.31%), Postives = 123/169 (72.78%), Query Frame = 1
Query:  100 GSPTPYMSLPFFKPWFPKPAAGAAESMPNPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMGH 606
            G P     LP  K W  +         P PP+L ESCG +LIMGT GG GMG +FG+FLGAMGDMQP+Q++NGR+VPQAPL E AR AY  T  RSL + +NFASFSAIFM SECVIEKMRGK DMMNSVY GC TG AFG+K GP+ A  GC+GMA FSAV+D +MGH
Sbjct:   34 GRPLLLKFLPTVKAWDMR---TGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.010e-44
Identity = 85/169 (50.30%), Postives = 109/169 (64.50%), Query Frame = 1
Query:  112 PYMS---LPFFKPWFPKPAAGAAESMPNPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQP-LQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMGH 606
            PY +   LP+  PW P    GA E  P+   + ESCG K  +G  GGA MG + G+FLGAM DM P + ++NG++VPQAPL+E AR   + T E+ +   RNFA  + +F GSEC++EK RGK D+ N V +GC TGAA   KQGPQAA  GC G A FS V+D +MGH
Sbjct:   53 PYFNTTRLPYLIPWMPT-FNGAQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 6.280e-42
Identity = 81/162 (50.00%), Postives = 108/162 (66.67%), Query Frame = 1
Query:  121 SLPFFKPWFPKPAAGAAESMPNPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQP-LQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMG 603
            SLP+F+PW  KP +G  +  P+   L ESCG K  +G  GG  MG + G+FLGAM DM P + ++ G++VPQAPL+E  R   + TAE+S+   R FA  + +F GSEC++EK RGK+D+ NSV +GC TGAA   K GP +A FGC G A FS V+D +MG
Sbjct:  104 SLPYFQPW--KPTSGPEQLPPDFTFLSESCGGKAAIGVFGGGVMGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A7S2AAN4_TRICV (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAN4_TRICV)

HSP 1 Score: 152 bits (384), Expect = 1.150e-40
Identity = 80/165 (48.48%), Postives = 102/165 (61.82%), Query Frame = 1
Query:  121 SLPFFKPWFPKPAAGAAESMPNPPS--LQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQP-LQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMGH 606
            SLP+  PW+P P   A+   P P    L ESCG K  +G  GGA  G   G+FLGAM DM P + ++NG++VPQAPL+E  R   + T E+ +   RNFA  + +F G+EC++EK RGK D+ NS   GC TGAA   KQGPQAA  GC G A FS V+D +  H
Sbjct:   96 SLPYLTPWYPIPGPNASAEGPPPDFSWLSESCGGKAAIGVFGGAVCGLFMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQMRTTVRATGEKCIYWSRNFAFITGVFGGTECLVEKYRGKHDVWNSALGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSVFPH 260          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A1Z5K7I7_FISSO (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7I7_FISSO)

HSP 1 Score: 152 bits (383), Expect = 1.740e-40
Identity = 83/163 (50.92%), Postives = 105/163 (64.42%), Query Frame = 1
Query:  121 SLPFFKPWFPKPAAGAAESMPNPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQP-LQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMGH 606
            SLP+  PW  KP A   E  P+   L  SC  K+ +G +GGAGMG + GLFLGA+ D  P +Q++ GR VPQAPLRE  R+  + TAE+S     NFA  + +F GSEC++EK RGK+D+ NSV +GC TGAA   K GPQ+A  GC G A FS V+D  M H
Sbjct:  103 SLPYPLPW--KPVASPTEPPPDFSWLTGSCAGKVAIGVIGGAGMGALMGLFLGALSDTTPPVQVIGGRDVPQAPLREQMRVVMRATAEKSRYWAGNFAFITGVFAGSECLVEKYRGKNDLWNSVASGCITGAAMQAKAGPQSAALGCGGFAAFSLVIDSFMHH 263          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.110e-40
Identity = 82/163 (50.31%), Postives = 103/163 (63.19%), Query Frame = 1
Query:  121 SLPFFKPWFPKPAAGAAESMPNPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQP-LQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMGH 606
            SLP+F PW  K + G  E  PN   L + C  K  +G  GG  MG + G+FLGA+ D QP +Q+  G+ VPQAP +E AR   + TAE+S+   RNFA  + +F GSEC++EK RGK DM N V +GC TGAA     GPQAA  GC G A FS V+DKIMG+
Sbjct:  110 SLPYFMPW--KTSGGPTEIPPNYAWLMDGCAGKAAIGVFGGGVMGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A7R9WDT6_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDT6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.190e-39
Identity = 85/178 (47.75%), Postives = 108/178 (60.67%), Query Frame = 1
Query:   79 SNGSGPLGSPTPYMSLPFFKPWFPKPAAGAAESMPNPPS----LQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQP-LQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKI 597
            SN    LG+ T   S+P   PW+P P  G   SM  PP     L ESCG K  MG  GGA  G + G+FLGAM DM P + +++G++VPQAPL+E  R   + T E+ L   RNFA  + +F G+EC++EK RGK D+ N+   GC TGAA   KQGPQAA  GC G A FS V+D +
Sbjct:   72 SNPEFTLGTLT-RRSIPVLTPWYPVP--GPNSSMEGPPPDFSWLSESCGGKAAMGVFGGAVCGLLMGVFLGAMSDMTPPVTVIDGKEVPQAPLKEQVRTTLRATGEKCLYWSRNFAFITGVFGGTECLVEKYRGKHDVWNAAIGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSV 246          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC)

HSP 1 Score: 149 bits (375), Expect = 1.680e-39
Identity = 81/161 (50.31%), Postives = 105/161 (65.22%), Query Frame = 1
Query:  124 LPFFKPWFPKPAAGAAESMPNPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQP-LQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMG 603
            LP+ +PW  +  A  AE  PN   L ESCG K  +G +GG  MG V G+FLGA+ DM P + ++ G++VPQAPL+E  R   + TA++SL   R FA  + +F GSEC++EK RGK D+ NSV +GC TGAA   KQGPQA+  GC G A FS V+D  MG
Sbjct:   84 LPYPQPWA-RANASPAELPPNFDWLSESCGSKAAIGVIGGGAMGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243          
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 145 bits (366), Expect = 7.620e-39
Identity = 77/163 (47.24%), Postives = 98/163 (60.12%), Query Frame = 1
Query:  121 SLPFFKPWFPKPAAGAAESMPNPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQP-LQMVNGRQVPQAPLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMGH 606
            S+P F P  P P         NP    ESC  + ++G+  G  MG V G+FLGAMGD+ P +  V G++ PQ PL E AR AY+ TAERS+   R+F + +A+F G+ECVIEK RG+ D  N V +GCA GA      GP AAC GC G A FSA  + +MGH
Sbjct:   36 SVPIFTPATPHPGV-------NPGWAAESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11085.710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF19_9PHAE1.230e-9881.28Mitochondrial import inner membrane translocase su... [more]
A0A836C710_9STRA3.120e-6263.31Mitochondrial import inner membrane translocase su... [more]
A0A7S2P255_9STRA4.010e-4450.30Mitochondrial import inner membrane translocase su... [more]
A0A6U3RYY1_9STRA6.280e-4250.00Mitochondrial import inner membrane translocase su... [more]
A0A7S2AAN4_TRICV1.150e-4048.48Mitochondrial import inner membrane translocase su... [more]
A0A1Z5K7I7_FISSO1.740e-4050.92Mitochondrial import inner membrane translocase su... [more]
A0A448Z601_9STRA3.110e-4050.31Mitochondrial import inner membrane translocase su... [more]
A0A7R9WDT6_9STRA1.190e-3947.75Mitochondrial import inner membrane translocase su... [more]
K0TBX0_THAOC1.680e-3950.31Mitochondrial import inner membrane translocase su... [more]
A0A7S1TYW7_9STRA7.620e-3947.24Mitochondrial import inner membrane translocase su... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11085contigS-dermatodea_contig11085:3234..6372 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.1
Seed ortholog evalue2.4e-80
Seed eggNOG ortholog2880.D7G569
Preferred nameTIMM22
KEGG rclassRC00017
KEGG koko:K01094,ko:K17790
KEGG TC3.A.8.1
KEGG ReactionR02029
KEGG Pathwayko00564,ko01100,map00564,map01100
GOsGO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005886,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019866,GO:0022804,GO:0022857,GO:0022884,GO:0030943,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042721,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0072657,GO:0090150,GO:0090151,GO:0098796,GO:0098798,GO:0098800,GO:1904680,GO:1990542
EggNOG free text desc.Mitochondrial import inner membrane translocase subunit
EggNOG OGsCOG5596@1,KOG3225@2759
EC3.1.3.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionMitochondrial import inner membrane translocase subunit TIM22 homolog
Ec32 orthologEc-14_006420.1
Exons4
Model size1007
Cds size576
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11085.710.1prot_S-dermatodea_contig11085.710.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11085 3267..5974 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924186.569831-UTR-S-dermatodea_contig11085:3233..32661622924186.569831-UTR-S-dermatodea_contig11085:3233..3266Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11085 3234..3266 +
1694079077.5286822-UTR-S-dermatodea_contig11085:3233..32661694079077.5286822-UTR-S-dermatodea_contig11085:3233..3266Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11085 3234..3266 +
1622924186.6163795-UTR-S-dermatodea_contig11085:5974..63721622924186.6163795-UTR-S-dermatodea_contig11085:5974..6372Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11085 5975..6372 +
1694079077.5914931-UTR-S-dermatodea_contig11085:5974..63721694079077.5914931-UTR-S-dermatodea_contig11085:5974..6372Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11085 5975..6372 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924186.5787394-CDS-S-dermatodea_contig11085:3266..34741622924186.5787394-CDS-S-dermatodea_contig11085:3266..3474Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11085 3267..3474 +
1694079077.5421042-CDS-S-dermatodea_contig11085:3266..34741694079077.5421042-CDS-S-dermatodea_contig11085:3266..3474Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11085 3267..3474 +
1622924186.5873678-CDS-S-dermatodea_contig11085:4122..42321622924186.5873678-CDS-S-dermatodea_contig11085:4122..4232Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11085 4123..4232 +
1694079077.5509222-CDS-S-dermatodea_contig11085:4122..42321694079077.5509222-CDS-S-dermatodea_contig11085:4122..4232Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11085 4123..4232 +
1622924186.5972538-CDS-S-dermatodea_contig11085:5012..50821622924186.5972538-CDS-S-dermatodea_contig11085:5012..5082Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11085 5013..5082 +
1694079077.5605934-CDS-S-dermatodea_contig11085:5012..50821694079077.5605934-CDS-S-dermatodea_contig11085:5012..5082Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11085 5013..5082 +
1622924186.6064374-CDS-S-dermatodea_contig11085:5786..59741622924186.6064374-CDS-S-dermatodea_contig11085:5786..5974Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11085 5787..5974 +
1694079077.5709176-CDS-S-dermatodea_contig11085:5786..59741694079077.5709176-CDS-S-dermatodea_contig11085:5786..5974Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11085 5787..5974 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11085.710.1

>prot_S-dermatodea_contig11085.710.1 ID=prot_S-dermatodea_contig11085.710.1|Name=mRNA_S-dermatodea_contig11085.710.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=192bp
MSDDNRPHDRRFDERSNGSGPLGSPTPYMSLPFFKPWFPKPAAGAAESMP
NPPSLQESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMVNGRQVPQ
APLREHARLAYKQTAERSLSLGRNFASFSAIFMGSECVIEKMRGKSDMMN
SVYAGCATGAAFGMKQGPQAACFGCVGMATFSAVMDKIMGH*
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mRNA from alignment at S-dermatodea_contig11085:3234..6372+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11085.710.1 ID=mRNA_S-dermatodea_contig11085.710.1|Name=mRNA_S-dermatodea_contig11085.710.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3139bp|location=Sequence derived from alignment at S-dermatodea_contig11085:3234..6372+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAAGGTACAGCCAACGGCCTTCCTCTTTCTCCCATGAGCGACGACAACAG ACCTCACGACAGGAGGTTTGATGAGCGATCCAACGGCTCGGGACCGTTGG GTTCTCCGACTCCCTACATGAGCCTCCCGTTTTTCAAGCCGTGGTTTCCC AAGCCTGCCGCCGGAGCTGCGGAGTCAATGCCAAATCCACCCTCGCTTCA GGAGTCGTGCGGGTTCAAGCTCATCATGGGCACGGTCGGCGGTGAGGCTT GTGAACGAAGCGTACCAGTACTGCCGTGCTTGCCGCTGCGCTTGCATCGT GCTGTTCAAGCGGCTAGGAGGTTTCGTCGATGCTCTATCGAACATGCATC GTGTAAATCCGACGACTCTACAATTGTAACAGCAGAAGCTCATCTGGTAC TCATACACATGTTATACTGTACACGTATCGTAGCGTAAACCTGTCTGCAA CAGGAACAGGACAACGCACAGCACCAGTGCACCACAGACACCAGAGCATC TGCCTATAATAGCTCATTGAAATCTACGAGATTGGGCCAAACTCCATACA CCAGCGCTGCTGCCTTCGCTATCGTACGAGTACTGTACGCAGACATGGAA ACAAGCGTCGTGCCCGTGACCCATGGTTGCCCCAAACAAGGCTCGGGTCA TACGTTTGGCGTCATATCCGATTGTATCTATGGATCGCTGTCGCGCTTGG AACCATCAGCGTCACTAAGTACTTTCCCCAGCCATCCGCGTCCGCTTTGA TGGACTCAACTGCTGTACTGCTGTTGTCTGTATGATACGAGGTCCGTACA AGCACCTGATGCGCTGCAGCAGTTGTCACTTTTCGCTTTTCCAATGCCAA ACACGCCGTTTCTGGCTGTGCTGCTCTCGCCCGTGACAGGGGCCGGCATG GGTTTCGTGTTTGGGCTGTTTTTGGGCGCCATGGGCGACATGCAGCCCCT GCAGATGGTGAACGGGCGGCAGGTCCCGCAGGCGCCACTCCGAGAACACG TGCGTGCACTTGAGGCGTGTCGTGCGCTCGCGTATTAACGCCGTTTTGGA GTGGTGTTGATGCGCGTTCACGTACATTACGCTGGTGACTTTGTACACCA GGTATCATAGCTTGCGGAGTCTTTCTTCGTCGAGTAGGGTCGTTTTGAAG GCAAAAACCTCACGCTAATGTAAAAATTCCCATTCCCATGTTAATGGAAG GGTAAGACCCGGTAGCCTAGTAGGCTCTAGATTGGAACTCCCCACAGGGT AGCGGCGGAGTTTTCGTTGGCCGCCATGTCGTTGCGATGTATGTTACGAT GCTTATTTTCCGCGGTCGAAGCCTTGGCTGATATCATACCCTCGTAGTAA TATGTTGAAATAGTTGAGCTGTTCCACCTGTTCGAGTATTTCTCGCCGGC CCTGCTTCGATCCAGTTTTTGGTGGTGCCTTCTATCGACGTCCTCGTATC TCTTGGCTTCAAGGCTCGCTCACGTGTTAGTTTCTCCCGCTCAAGGAGGG TGAGCACTCCCAGGATCAGCTATTGCCTGCGTTCGCGGTGTTCGTGTACT CATGCGTCCGGCGGCCGAAGCGGCATCGAAACTATTAGCATTTAGCTTGC CATGGAACACACGCACTATTTTCCTACCGGGTGTTGCCTGACCGACAATT ATGTAGGCCGGGTGCCTCGTTGCGATAAACAGGATGCGACAAGCGACAAC CCTTGCCCTTTCCTCTTTGCTGAAGGCCCTCGTCTCCCCCTCTGAAATCC CTTGCACGCACTCCGCGGTGGTCTCTCAGGCGCGATTAGCATATAAGCAG ACCGCGGAGCGATCGCTGAGCCTGGGGAGAAATTTTGCGTCATTTTCTGG TGAGAACGAAAGCAGGTGGCGCACGGGGTATCGAGGAAACGCAGCTCACG ACAGCTTGTGATATGTGTGAAGAGGGACTGATGGTCACCCCCGTTATCAT CAGTACGTGGACTGCTGCGTGTTGCACAGCGCATTATCAGCAATCTTCAC CAGTTGGTGCGCTATTCTATTTTCGGAAGACCATAGTAAACAGGTCAAAA TTTGTCACAAATCTTGAGTTAGCAAAACAAAATAGGCCGGAACGATTGGG TATGGTATTCACGGTCGGTGTTTGTCTCATAGGGTAGGCCAGGCCTCGTG TTGTGTTTTGGTTCGTGATTTTTTTGTGTTGTTTGGGTGTTCATGGTATT AATAGGACCAGTTGCGGATTTATGGTCGTGAGATTTGGTCCTGACTACGT GATTATAGTGTGTACCTCCGTAATAGCAAACAGGCCGATATTTGCCAAGT AGGTCCTCGTCGGCGTGTTTGTTTTAGCTCTGAAGAGGTGTACGCTGCTC GACCAAACGAGCGCTGGATTGAAACGGGACATGCATAGCACCGTTTCGTG CTGGTCCGGGCTGTAATACCTTTTAACACGATTCGGATCTGCTGCGCGAG TCGAGTGTGCCGAGCGCTCTCGTCGAAATGTACGCCAACCGTTGCCCTTT GTTTTATCGCCCCGTATGTCTCGACATTGCGTCCTTCCGTTCCTGGCCGT CAGCAATTTTTATGGGGTCGGAGTGCGTGATCGAGAAGATGCGCGGCAAG AGCGACATGATGAACTCCGTGTACGCGGGATGCGCCACGGGGGCGGCATT CGGCATGAAGCAAGGGCCGCAGGCGGCGTGCTTCGGCTGCGTGGGGATGG CGACTTTTTCCGCCGTGATGGACAAGATAATGGGACATTAAGCGGAGGTC TTATCTAACTTGTATCGTAGCTCGATGATTTCGGCCTCCAGCGGGTTTTT GGGTGCTGTAGTAGGTTCGTAAACAAGTGCTGTTACCAATGTACGTATAT GTGGCTCATGTTTTGTGTGCCAAACAACGCCATGACGGGGTTTGTTTGTG TTGGCTCCTCCGTCGCAGGCGGTTTCTCGCACAGCGAAGGGCGACCGCAT CTGGAAGGCCCTCCTGGCGTACATCCCAACCAAGTGATTGTGCGAAGTAG CTCAAATATTGTGCGGGCGACGTGAGCCTGTTGTCTCCCGTGAGAGCATG GTGTAAGAACGGGACCAATCACAATGCGGAGCAGATTGTCTGGGACAACA ATCGAATTTTTTATCACGATAAGACACGTTTATACGACC
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Coding sequence (CDS) from alignment at S-dermatodea_contig11085:3234..6372+

>mRNA_S-dermatodea_contig11085.710.1 ID=mRNA_S-dermatodea_contig11085.710.1|Name=mRNA_S-dermatodea_contig11085.710.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at S-dermatodea_contig11085:3234..6372+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGCGACGACAACAGACCTCACGACAGGAGGTTTGATGAGCGATCCAA
CGGCTCGGGACCGTTGGGTTCTCCGACTCCCTACATGAGCCTCCCGTTTT
TCAAGCCGTGGTTTCCCAAGCCTGCCGCCGGAGCTGCGGAGTCAATGCCA
AATCCACCCTCGCTTCAGGAGTCGTGCGGGTTCAAGCTCATCATGGGCAC
GGTCGGCGATGAGCGACGACAACAGACCTCACGACAGGAGGTTTGATGAG
CGATCCAACGGCTCGGGACCGTTGGGTTCTCCGACTCCCTACATGAGCCT
CCCGTTTTTCAAGCCGTGGTTTCCCAAGCCTGCCGCCGGAGCTGCGGAGT
CAATGCCAAATCCACCCTCGCTTCAGGAGTCGTGCGGGTTCAAGCTCATC
ATGGGCACGGTCGGCGGGGCCGGCATGGGTTTCGTGTTTGGGCTGTTTTT
GGGCGCCATGGGCGACATGCAGCCCCTGCAGATGGTGAACGGGCGGCAGG
TCCCGCAGGCGCCACTCCGAGAACACGGGCCGGCATGGGTTTCGTGTTTG
GGCTGTTTTTGGGCGCCATGGGCGACATGCAGCCCCTGCAGATGGTGAAC
GGGCGGCAGGTCCCGCAGGCGCCACTCCGAGAACACGCGCGATTAGCATA
TAAGCAGACCGCGGAGCGATCGCTGAGCCTGGGGAGAAATTTTGCGTCAT
TTTCTGGCGCGATTAGCATATAAGCAGACCGCGGAGCGATCGCTGAGCCT
GGGGAGAAATTTTGCGTCATTTTCTGCAATTTTTATGGGGTCGGAGTGCG
TGATCGAGAAGATGCGCGGCAAGAGCGACATGATGAACTCCGTGTACGCG
GGATGCGCCACGGGGGCGGCATTCGGCATGAAGCAAGGGCCGCAGGCGGC
GTGCTTCGGCTGCGTGGGGATGGCGACTTTTTCCGCCGTGATGGACAAGA
TAATGGGACATTAACAATTTTTATGGGGTCGGAGTGCGTGATCGAGAAGA
TGCGCGGCAAGAGCGACATGATGAACTCCGTGTACGCGGGATGCGCCACG
GGGGCGGCATTCGGCATGAAGCAAGGGCCGCAGGCGGCGTGCTTCGGCTG
CGTGGGGATGGCGACTTTTTCCGCCGTGATGGACAAGATAATGGGACATT
AA
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