prot_S-dermatodea_contig1107.698.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1107.698.1
Unique Nameprot_S-dermatodea_contig1107.698.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length90
Homology
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A7S2DUA8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DUA8_9EUKA)

HSP 1 Score: 60.1 bits (144), Expect = 4.330e-9
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGL 66
            R +R LRPLR+I R PG++ V+N ++R L  V NV +V++++ LIF ILGV LF G    C ++G+
Sbjct:  110 RAMRCLRPLRVISRNPGMKMVINTLLRALPGVANVTLVMMLLLLIFGILGVQLFMGKFSECAVAGV 175          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A818IVU1_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818IVU1_9BILA)

HSP 1 Score: 61.6 bits (148), Expect = 4.520e-9
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCD 62
            R LRALRPLR+I RAPGLR VV+A++  L  + N+ ++  V F+IF ILGV LFKG  + C+
Sbjct:  807 RLLRALRPLRVINRAPGLRLVVHALLSSLRPIGNIVIICCVFFIIFGILGVQLFKGKFYYCE 868          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A818JEY9_9BILA (Voltage-dependent T-type calcium channel subunit alpha n=9 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818JEY9_9BILA)

HSP 1 Score: 61.6 bits (148), Expect = 4.550e-9
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCD 62
            R LRALRPLR+I RAPGLR VV+A++  L  + N+ ++  V F+IF ILGV LFKG  + C+
Sbjct: 1196 RLLRALRPLRVINRAPGLRLVVHALLSSLRPIGNIVIICCVFFIIFGILGVQLFKGKFYYCE 1257          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A821SWI8_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821SWI8_9BILA)

HSP 1 Score: 61.6 bits (148), Expect = 4.570e-9
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCD 62
            R LRALRPLR+I RAPGLR VV+A++  L  + N+ ++  V F+IF ILGV LFKG  + C+
Sbjct: 1716 RLLRALRPLRVINRAPGLRLVVHALLSSLRPIGNIVIICCVFFIIFGILGVQLFKGKFYYCE 1777          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: C3ZY89_BRAFL (Sodium channel protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZY89_BRAFL)

HSP 1 Score: 60.8 bits (146), Expect = 8.230e-9
Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGC 61
            R +RALRPLR I RA G++ VVNA+I  + SV NV +V LV +LIF+I+GV LFKG  F C
Sbjct:   94 RVIRALRPLRAISRAEGMKVVVNALIGAIPSVTNVLMVCLVFWLIFAIMGVQLFKGKFFKC 154          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A6P4YVC3_BRABE (Sodium channel protein n=18 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YVC3_BRABE)

HSP 1 Score: 60.8 bits (146), Expect = 8.530e-9
Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGC 61
            R +RALRPLR I RA G++ VVNA+I  + SV NV +V LV +LIF+I+GV LFKG  F C
Sbjct: 1377 RVIRALRPLRAISRAEGMKVVVNALIGAIPSVTNVLMVCLVFWLIFAIMGVQLFKGKFFKC 1437          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A5D6XVA6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVA6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.180e-8
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   12 IPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGLDTVSLVAVMEEFGLSRAMYVQ 87
            I R PG++RVVNAM+  + S++NV +V  +I LIF ILGV  FKG L+ CD+S      +  +   FG S   + Q
Sbjct: 1403 ISRVPGMKRVVNAMLSSIPSIMNVFLVCSLILLIFGILGVNFFKGRLYYCDMSSFSAEQMARLEGTFGFSSLSFKQ 1478          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A5D6XG87_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG87_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.180e-8
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGLDTVS 70
            R  RALRPLR+I R PGL+ VVN++I  +  ++NV VV L++F IFSIL V   KG L+ C     D +S
Sbjct:  991 RTFRALRPLRVINRNPGLKLVVNSLIASIPQIVNVIVVCLLVFTIFSILAVNNLKGKLYSCRGDAFDALS 1060          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: K3WQ22_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ22_GLOUD)

HSP 1 Score: 58.9 bits (141), Expect = 3.900e-8
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGLDTVS 70
            R  RALRPLR+I R PGL+ VV+++I  +  +LNV VV L++F IFSIL V   KG L+ C     D +S
Sbjct:  136 RTFRALRPLRMINRNPGLKLVVSSLIASIPQILNVIVVCLLVFTIFSILAVNNLKGKLYSCQGDVFDALS 205          
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: G5A1T8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A1T8_PHYSP)

HSP 1 Score: 58.5 bits (140), Expect = 5.470e-8
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGLDTVSLVAVMEEFGLSRA 83
            R LRALRPLR+I R PGL+ VV+A+I  + +VLNV  + + +FL+FSI  V+  KG    C    LD  SL    +EF +S A
Sbjct:  678 RDLRALRPLRMISRRPGLKLVVSALIESIPAVLNVVFLSMALFLLFSIAAVHFLKGRFRACTGDVLD--SLPTDQKEFLVSPA 758          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2DUA8_9EUKA4.330e-946.97Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A818IVU1_9BILA4.520e-954.84Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A818JEY9_9BILA4.550e-954.84Voltage-dependent T-type calcium channel subunit a... [more]
A0A821SWI8_9BILA4.570e-954.84Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 ... [more]
C3ZY89_BRAFL8.230e-959.02Sodium channel protein n=1 Tax=Branchiostoma flori... [more]
A0A6P4YVC3_BRABE8.530e-959.02Sodium channel protein n=18 Tax=Branchiostoma TaxI... [more]
A0A5D6XVA6_9STRA2.180e-843.42Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A5D6XG87_9STRA2.180e-850.00Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WQ22_GLOUD3.900e-850.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
G5A1T8_PHYSP5.470e-846.99Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 17..86
e-value: 1.1E-6
score: 30.8
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 1..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..90
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1..55
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 1..60
e-value: 4.5E-13
score: 49.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1107contigS-dermatodea_contig1107:19353..20067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1107.698.1mRNA_S-dermatodea_contig1107.698.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1107 19352..20067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1107.698.1 ID=prot_S-dermatodea_contig1107.698.1|Name=mRNA_S-dermatodea_contig1107.698.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=90bp
RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILG
VYLFKGALFGCDISGLDTVSLVAVMEEFGLSRAMYVQPLR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom