mRNA_S-dermatodea_contig1107.698.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A7S2DUA8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DUA8_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 4.330e-9 Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGL 198
R +R LRPLR+I R PG++ V+N ++R L V NV +V++++ LIF ILGV LF G C ++G+
Sbjct: 110 RAMRCLRPLRVISRNPGMKMVINTLLRALPGVANVTLVMMLLLLIFGILGVQLFMGKFSECAVAGV 175
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A818IVU1_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818IVU1_9BILA) HSP 1 Score: 61.6 bits (148), Expect = 4.520e-9 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCD 186
R LRALRPLR+I RAPGLR VV+A++ L + N+ ++ V F+IF ILGV LFKG + C+
Sbjct: 807 RLLRALRPLRVINRAPGLRLVVHALLSSLRPIGNIVIICCVFFIIFGILGVQLFKGKFYYCE 868
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A818JEY9_9BILA (Voltage-dependent T-type calcium channel subunit alpha n=9 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818JEY9_9BILA) HSP 1 Score: 61.6 bits (148), Expect = 4.550e-9 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCD 186
R LRALRPLR+I RAPGLR VV+A++ L + N+ ++ V F+IF ILGV LFKG + C+
Sbjct: 1196 RLLRALRPLRVINRAPGLRLVVHALLSSLRPIGNIVIICCVFFIIFGILGVQLFKGKFYYCE 1257
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A821SWI8_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821SWI8_9BILA) HSP 1 Score: 61.6 bits (148), Expect = 4.570e-9 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCD 186
R LRALRPLR+I RAPGLR VV+A++ L + N+ ++ V F+IF ILGV LFKG + C+
Sbjct: 1716 RLLRALRPLRVINRAPGLRLVVHALLSSLRPIGNIVIICCVFFIIFGILGVQLFKGKFYYCE 1777
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: C3ZY89_BRAFL (Sodium channel protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZY89_BRAFL) HSP 1 Score: 60.8 bits (146), Expect = 8.230e-9 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGC 183
R +RALRPLR I RA G++ VVNA+I + SV NV +V LV +LIF+I+GV LFKG F C
Sbjct: 94 RVIRALRPLRAISRAEGMKVVVNALIGAIPSVTNVLMVCLVFWLIFAIMGVQLFKGKFFKC 154
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A6P4YVC3_BRABE (Sodium channel protein n=18 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YVC3_BRABE) HSP 1 Score: 60.8 bits (146), Expect = 8.530e-9 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGC 183
R +RALRPLR I RA G++ VVNA+I + SV NV +V LV +LIF+I+GV LFKG F C
Sbjct: 1377 RVIRALRPLRAISRAEGMKVVVNALIGAIPSVTNVLMVCLVFWLIFAIMGVQLFKGKFFKC 1437
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A5D6XVA6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVA6_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.180e-8 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 34 IPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGLDTVSLVAVMEEFGLSRAMYVQ 261
I R PG++RVVNAM+ + S++NV +V +I LIF ILGV FKG L+ CD+S + + FG S + Q
Sbjct: 1403 ISRVPGMKRVVNAMLSSIPSIMNVFLVCSLILLIFGILGVNFFKGRLYYCDMSSFSAEQMARLEGTFGFSSLSFKQ 1478
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: A0A5D6XG87_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG87_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.180e-8 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGLDTVS 210
R RALRPLR+I R PGL+ VVN++I + ++NV VV L++F IFSIL V KG L+ C D +S
Sbjct: 991 RTFRALRPLRVINRNPGLKLVVNSLIASIPQIVNVIVVCLLVFTIFSILAVNNLKGKLYSCRGDAFDALS 1060
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: K3WQ22_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ22_GLOUD) HSP 1 Score: 58.9 bits (141), Expect = 3.900e-8 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGLDTVS 210
R RALRPLR+I R PGL+ VV+++I + +LNV VV L++F IFSIL V KG L+ C D +S
Sbjct: 136 RTFRALRPLRMINRNPGLKLVVSSLIASIPQILNVIVVCLLVFTIFSILAVNNLKGKLYSCQGDVFDALS 205
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Match: G5A1T8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A1T8_PHYSP) HSP 1 Score: 58.5 bits (140), Expect = 5.470e-8 Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 1 RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGVYLFKGALFGCDISGLDTVSLVAVMEEFGLSRA 249
R LRALRPLR+I R PGL+ VV+A+I + +VLNV + + +FL+FSI V+ KG C LD SL +EF +S A
Sbjct: 678 RDLRALRPLRMISRRPGLKLVVSALIESIPAVLNVVFLSMALFLLFSIAAVHFLKGRFRACTGDVLD--SLPTDQKEFLVSPA 758 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1107.698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1107.698.1 >prot_S-dermatodea_contig1107.698.1 ID=prot_S-dermatodea_contig1107.698.1|Name=mRNA_S-dermatodea_contig1107.698.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=90bp RGLRALRPLRLIPRAPGLRRVVNAMIRGLSSVLNVAVVVLVIFLIFSILGback to top mRNA from alignment at S-dermatodea_contig1107:19352..20067- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1107.698.1 ID=mRNA_S-dermatodea_contig1107.698.1|Name=mRNA_S-dermatodea_contig1107.698.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=716bp|location=Sequence derived from alignment at S-dermatodea_contig1107:19352..20067- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1107:19352..20067- >mRNA_S-dermatodea_contig1107.698.1 ID=mRNA_S-dermatodea_contig1107.698.1|Name=mRNA_S-dermatodea_contig1107.698.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at S-dermatodea_contig1107:19352..20067- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |