mRNA_S-latissima_F_contig1045.402.1 (mRNA) Saccharina latissima SLPER63f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-latissima_F_contig1045.402.1
Unique NamemRNA_S-latissima_F_contig1045.402.1
TypemRNA
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Homology
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: D8LD13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD13_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 1.730e-127
Identity = 159/214 (74.30%), Postives = 184/214 (85.98%), Query Frame = 1 
Query:  256 DLPSQKWQSSICCAGGCKSLYGLCVPCAVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEKRGPIHDHWREGSNRANIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTSGAPGLNTVSR 897
            DLPSQKW S++CCAGG KSLYGLCVPC +ATAR+R+DGSSWCVN +CL+ CAAR+I+RHGYGIKGHCCADI+CS++C PCV CQLLGETEKRG ++D W + S R+  EQPWKFG+FNC DDCTTC YG  CPMPAVGTIRTQMD+SDW+FNC C+NP IARSLVR++YNIEG+D AD  LTC CFPCSI+QMLNETQHRG  +G PG N V R
Sbjct:   61 DLPSQKWHSAVCCAGGIKSLYGLCVPCGLATARHRLDGSSWCVNAMCLSPCAARNIVRHGYGIKGHCCADILCSLVCAPCVTCQLLGETEKRGCVYDSWNDQSARSRREQPWKFGLFNCLDDCTTCSYGFFCPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQSYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTGCPGFNAVER 274
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: A0A835YTR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTR6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.380e-62
Identity = 94/188 (50.00%), Postives = 124/188 (65.96%), Query Frame = 1 
Query:  313 LYGL-CVPCAVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEKRGPIHDHW-REGSNRANIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTSG 870
            +Y L C PCAVATA  R DGSSW  N   +N C AR+++R GYGI+GHCC+D++C+ L  PC+  QLL ET +RG + DHW R    R+     WKFG+    +D     Y    P  A+G++RT +D SDW+FNCC LN C AR++VR  YNIEG+   D+  +CFC PC+ISQM+ E QHRG+ +G
Sbjct:    1 MYSLFCPPCAVATAVTRFDGSSWANNCCFVNPCMARNVVREGYGIEGHCCSDLLCTCLFLPCMTGQLLAETAERGSVIDHWARSNRYRSPTLTQWKFGLCGFTEDPGKLFYALCMPWCALGSVRTDLDGSDWIFNCCFLNSCAARAMVRHAYNIEGTTANDVATSCFCLPCAISQMMIEVQHRGRVNG 188
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: A0A7S2V1M3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1M3_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.950e-50
Identity = 87/219 (39.73%), Postives = 122/219 (55.71%), Query Frame = 1 
Query:  220 QPMEMAVDDAGGDLPSQKWQSSI--CCAGGCKSLYGLCVP-CAVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEKRGPIHDHWREGSNRANIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTS 867
            QP  M V     + P + W+S +  CC+     ++  C+P CAVA AR + DGS+ C N++C+ + A R+IIR GY IKG C  D++ ++ C  CV  Q++ E E RG +   +  GSNR   E PWK  +F+   + +   YGC CP  A+   RT  D SD  FN  C  PC+ARS++R  YNIEGS   D+     C  C   Q++NE   RGK +
Sbjct:    3 QPQVMMVQVT--EAPQEDWKSGLFGCCSSPKNLIFACCLPWCAVADARTKFDGSNCCFNVMCVGIVAGRNIIREGYKIKGGCIGDLIATLFCPVCVMTQMMNEVESRGKVTAQY--GSNRPATEVPWKHSIFDICFNSSNFIYGCCCPSCAIAQARTDFDGSDCCFNFLCFTPCLARSVIREGYNIEGSCIMDILCPWLCVECVACQLMNEVSDRGKVT 217
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: A0A7S2XYH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYH0_9STRA)

HSP 1 Score: 168 bits (425), Expect = 5.230e-47
Identity = 95/221 (42.99%), Postives = 127/221 (57.47%), Query Frame = 1 
Query:  220 QPMEMAVDDAGGDLPSQKWQSSIC-CAGGC--KSLYGLCVPC-AVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEKRGPIHDHWREGSNRANIEQPW-KFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTS 867
            Q +E A+ +A  D   ++WQ+ +C CAGG      YGL  PC A+ATAR   DGS+WC N L     AAR IIR GY IKG   +DI  ++ C  C A QL+ E E RG +   +  G+ R    QPW K G+ + F +     +G  CP  A+   R+  D S++ FNCCC++PC+ARS++R  YNIEG+   DL   C C  C+  QMLNE   RGK +
Sbjct:   19 QAIETAIAEAATD---EQWQNGLCQCAGGSFGTCFYGLFCPCCAIATARTYYDGSNWCFNCLVTPHLAARDIIREGYNIKGSWLSDIFLTIFCAGCSAVQLMNEVETRGLVSADF--GTARPPDPQPWTKKGVCSNFGNFF---FGMCCPHCAISQARSSFDGSEFCFNCCCVSPCLARSVIREGYNIEGNCFGDLIYPCCCPSCAACQMLNEVDERGKVN 231
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: A0A7S4D5S2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5S2_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 1.540e-18
Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 1 
Query:  211 TTTQPMEMAVDDAGGDLPSQK----WQSSI--CCAGGCKSLYG-LCVPCAVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGH-CCADIMCSMLCTPCVACQLLGE 519
            TT Q +    +D G + P ++    W + +  C       +YG  C  CA A+AR+++DGS+WC NLLCLN CAAR I+RH Y IKG  CC D+  +  C PC  CQLL E
Sbjct:   37 TTPQRLPPTNEDDGDEEPEEELLVDWDNGLFQCLEDPKTCVYGCFCPQCAHASARSKLDGSNWCFNLLCLNPCAARYIVRHTYKIKGTGCCGDVCRAAACGPCATCQLLAE 147
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: UPI001CF6FFB7 (cornifelin-like n=1 Tax=Thunnus albacares TaxID=8236 RepID=UPI001CF6FFB7)

HSP 1 Score: 73.2 bits (178), Expect = 4.660e-12
Identity = 42/122 (34.43%), Postives = 58/122 (47.54%), Query Frame = 1 
Query:  580 EQP---WKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIA----------------RSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTSGAPGLNT 888
            EQP   W+ G+F+CF++ +TC YG  C      T+  +  E++ L  C  L+P I                 RS VR  Y I+GS C D+  +CFC  CS  QM  E +HR K      + T
Sbjct:    3 EQPLTDWESGLFDCFEEVSTCCYGFWCCPCLACTVSNRFGENNCLPLCDILSPSICAAFGIPLFVPPAAVSLRSAVRNKYGIKGSICKDIAASCFCVWCSWCQMHRELKHRKKVPAIINIQT 124
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: I1KL84_SOYBN (Uncharacterized protein n=3 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1KL84_SOYBN)

HSP 1 Score: 72.0 bits (175), Expect = 8.650e-12
Identity = 36/107 (33.64%), Postives = 49/107 (45.79%), Query Frame = 1 
Query:  589 WKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLN-----------------PCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRG 858
            W  G+  CF DC++C     CP  + G I   +D+       CCL+                  C+ R+ +RR Y IEG  CAD  L+CFC  C++ Q   E Q RG
Sbjct:   10 WSSGLCGCFSDCSSCCLTFWCPCASFGRIGEIVDKGT---TSCCLHGSLFCLLGGFSYLAGIYACMYRTKIRRQYGIEGHQCADFLLSCFCSACTLCQEYRELQARG 113
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: I1KL83_SOYBN (Uncharacterized protein n=4 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1KL83_SOYBN)

HSP 1 Score: 72.0 bits (175), Expect = 1.240e-11
Identity = 36/107 (33.64%), Postives = 49/107 (45.79%), Query Frame = 1 
Query:  589 WKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLN-----------------PCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRG 858
            W  G+  CF DC++C     CP  + G I   +D+       CCL+                  C+ R+ +RR Y IEG  CAD  L+CFC  C++ Q   E Q RG
Sbjct:   10 WSSGLCGCFSDCSSCCLTFWCPCASFGRIGEIVDKGT---TSCCLHGSLFCLLGGFSYLAGIYACMYRTKIRRQYGIEGHQCADFLLSCFCSACTLCQEYRELQARG 113
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: UPI001448514A (cornifelin homolog A-like n=3 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001448514A)

HSP 1 Score: 71.2 bits (173), Expect = 2.510e-11
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 1 
Query:  589 WKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWL--FNCCCL-NPCIA-------RSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKT 864
            W  G+F+CF+D ++C YG  C      T+  +  E+  L  F+ CCL +PC+        R  +R  Y I+GS C D+  TC C  C+  QM  E +HR +T
Sbjct:    9 WNTGLFDCFEDASSCCYGFWCGPCLASTVSERFGENRCLPLFDICCLKSPCLPSPAVLSLRVAMRNRYGIKGSLCKDIIATCCCEWCAWCQMHRELKHRRQT 110
[Close]
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: UPI0011C0D6FD (PLAC8-like protein 1 n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C0D6FD)

HSP 1 Score: 71.6 bits (174), Expect = 9.620e-11
Identity = 37/112 (33.04%), Postives = 54/112 (48.21%), Query Frame = 1 
Query:  574 NIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIA----------------RSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGK 861
            N    W  G+ +CF+D +TC YG  C      T+  +  E++ L  C  ++P I                 R+ +R  YNI+GS C D+ ++CFC  CS  QM  E +HR K
Sbjct:  108 NQPTDWNTGLCDCFEDASTCCYGFWCCPCLACTVSGRFGENNCLPLCDIISPAILTACGIPMVVPPAVLSLRAAIRHKYNIKGSLCKDIGVSCFCIWCSWCQMHRELKHRNK 219
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD13_ECTSI1.730e-12774.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTR6_9STRA1.380e-6250.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1M3_9STRA2.950e-5039.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2XYH0_9STRA5.230e-4742.99Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4D5S2_HETAK1.540e-1844.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001CF6FFB74.660e-1234.43cornifelin-like n=1 Tax=Thunnus albacares TaxID=82... [more]
I1KL84_SOYBN8.650e-1233.64Uncharacterized protein n=3 Tax=Glycine subgen. So... [more]
I1KL83_SOYBN1.240e-1133.64Uncharacterized protein n=4 Tax=Glycine subgen. So... [more]
UPI001448514A2.510e-1136.27cornifelin homolog A-like n=3 Tax=Epinephelus lanc... [more]
UPI0011C0D6FD9.620e-1133.04PLAC8-like protein 1 n=1 Tax=Sparus aurata TaxID=8... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1045contigS-latissima_F_contig1045:31037..38316 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Saccharina latissima female vs UniRef902022-09-19
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score75.9
Seed ortholog evalue3.3e-11
Seed eggNOG ortholog72658.Bostr.7128s0101.1.p
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0008285,GO:0042127,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065007
EggNOG free text desc.Protein PLANT CADMIUM RESISTANCE
EggNOG OGs2E0DQ@1,2S7UD@2759,37UTH@33090,3GJ15@35493,3HTWB@3699
Ec32 ortholog descriptionUncharacterised protein family Cys-rich
Ec32 orthologEc-01_001880.1
COG Functional cat.S
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
Exons6
Model size973
Cds size822
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1045.402.1prot_S-latissima_F_contig1045.402.1Saccharina latissima SLPER63f femalepolypeptideS-latissima_F_contig1045 31110..38238 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815421.3788607-UTR-S-latissima_F_contig1045:31036..311091622815421.3788607-UTR-S-latissima_F_contig1045:31036..31109Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1045 31037..31109 -
1693924870.7002847-UTR-S-latissima_F_contig1045:31036..311091693924870.7002847-UTR-S-latissima_F_contig1045:31036..31109Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1045 31037..31109 -
1622815421.5248613-UTR-S-latissima_F_contig1045:38238..383161622815421.5248613-UTR-S-latissima_F_contig1045:38238..38316Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1045 38239..38316 -
1693924870.768745-UTR-S-latissima_F_contig1045:38238..383161693924870.768745-UTR-S-latissima_F_contig1045:38238..38316Saccharina latissima SLPER63f femaleUTRS-latissima_F_contig1045 38239..38316 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815421.3912334-CDS-S-latissima_F_contig1045:31109..312381622815421.3912334-CDS-S-latissima_F_contig1045:31109..31238Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 31110..31238 -
1693924870.7132695-CDS-S-latissima_F_contig1045:31109..312381693924870.7132695-CDS-S-latissima_F_contig1045:31109..31238Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 31110..31238 -
1622815421.4006798-CDS-S-latissima_F_contig1045:32383..325231622815421.4006798-CDS-S-latissima_F_contig1045:32383..32523Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 32384..32523 -
1693924870.7229936-CDS-S-latissima_F_contig1045:32383..325231693924870.7229936-CDS-S-latissima_F_contig1045:32383..32523Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 32384..32523 -
1622815421.4301333-CDS-S-latissima_F_contig1045:33078..332621622815421.4301333-CDS-S-latissima_F_contig1045:33078..33262Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 33079..33262 -
1693924870.7311485-CDS-S-latissima_F_contig1045:33078..332621693924870.7311485-CDS-S-latissima_F_contig1045:33078..33262Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 33079..33262 -
1622815421.4836788-CDS-S-latissima_F_contig1045:33713..338471622815421.4836788-CDS-S-latissima_F_contig1045:33713..33847Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 33714..33847 -
1693924870.7392182-CDS-S-latissima_F_contig1045:33713..338471693924870.7392182-CDS-S-latissima_F_contig1045:33713..33847Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 33714..33847 -
1622815421.5000222-CDS-S-latissima_F_contig1045:37086..373181622815421.5000222-CDS-S-latissima_F_contig1045:37086..37318Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 37087..37318 -
1693924870.7520916-CDS-S-latissima_F_contig1045:37086..373181693924870.7520916-CDS-S-latissima_F_contig1045:37086..37318Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 37087..37318 -
1622815421.5152822-CDS-S-latissima_F_contig1045:38235..382381622815421.5152822-CDS-S-latissima_F_contig1045:38235..38238Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 38236..38238 -
1693924870.7609925-CDS-S-latissima_F_contig1045:38235..382381693924870.7609925-CDS-S-latissima_F_contig1045:38235..38238Saccharina latissima SLPER63f femaleCDSS-latissima_F_contig1045 38236..38238 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-latissima_F_contig1045.402.1

>prot_S-latissima_F_contig1045.402.1 ID=prot_S-latissima_F_contig1045.402.1|Name=mRNA_S-latissima_F_contig1045.402.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=274bp
MARKSKSGRSSAGSDTRSNASGRSRRSTRSHKSRASRSAPSSRATTTQPM
EMAVDDAGGDLPSQKWQSSICCAGGCKSLYGLCVPCAVATARNRIDGSSW
CVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEK
RGPIHDHWREGSNRANIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIR
TQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSIS
QMLNETQHRGKTSGAPGLNTVSR*
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mRNA from alignment at S-latissima_F_contig1045:31037..38316-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-latissima_F_contig1045.402.1 ID=mRNA_S-latissima_F_contig1045.402.1|Name=mRNA_S-latissima_F_contig1045.402.1|organism=Saccharina latissima SLPER63f female|type=mRNA|length=7280bp|location=Sequence derived from alignment at S-latissima_F_contig1045:31037..38316- (Saccharina latissima SLPER63f female)
GCAAAAAAGAGAAAGAACGGTGTGCACGAAGCGAGGCAAGCGTGAGCGTT
CTTCCCGGGGCAGCGACGCGCCAGAATCATGGTGCGTGCACACATATTTC
TTCGCGTAGCTCTAGCGGCTGTGTTGAGATTCGTATTGTGGTTGTCGTTC
CTAGCGGACCCTCTTCGTCGTCCATAATTCGATTACTGTCAAAAGTACAA
CTTCTACTACTCTGTTCGTTTGTTCCATAGAGACGAGCGGGGTCGTCGAG
ACCAGGTCAGCTCTGCCCCACAGCGCGAGACAGAAGAACGGTATCAAGGC
GTGTTGTTCGTGAATGCCCTTCCGCCGTGCGTATAGCCTCGGGTGATTTG
TTTTCCCCGCTATAAGTCTATCGCAGTGGACTTCCAACATGAAAACGTAC
AGTAGCTCGCCACCCCCTTCACTTCGGTCAGCCCCGTCCACACTGACTGC
TGCACAATTCTCATTTTCTCCAAGCGGCTCCATGACATCGCACAGCCATC
GCGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCTCGCCGACTCCTCGTT
GTGATCCCTCTCGTCTCCCCTCCATCTGACGAAGAGCCGCTTCCATGCCT
GTTTCCACTGCGAACCTCTCGTCCGAACCTTGACGAAAATGCCGCACCCC
AACACACCAAAATGCCACACCCAACACCGCCACCCGGCCGCTTTCTCACA
TTTCTCCAACTTGCTGGCTCGCGCTGGCACCCGCCGAAATTCCATTCTTC
ATCGCACGCACACACACAAAAAAACAGACCAAAACACAATCAAACTCAAA
CCAAACACTCCTTCTGCTTGGTACTACAGTAGTAGCACTCCACACCCAAC
ACCCAACCCAACGTACCCGGGTAACAAAGACCCAACTCGTCCAAAACGCT
CACACCCAAACGCCCACACCCAAAATGCCCATCCAAAACACCGTCCCAAT
ACACTGCCCACCCGAAACACCCAACCACCCAATACACACACGAAACAGGC
GCGCAAGAGCAAGAGCGGGCGGAGCAGCGCGGGCAGCGACACTCGGTCGA
ACGCCTCTGGACGATCAAGGCGATCGACCAGGTCCCACAAGTCGAGGGCC
TCTCGCTCCGCCCCATCTTCCCGGGCCACCACCACCCAGCCCATGGAGAT
GGCCGTGGACGACGCTGGGGGGGACCTGCCCTCGCAAAAGTGGCAGTCTT
CCATCTGCTGTGCTGGGGGGTGCAAGTCACGTGAGAGACAAGGGGGGGGG
GCGTCTTGACGGGCGGGGGTGTCTTGTTGCCTGGTGTTGCTTGGTCTGGG
CGAGGGGGGGGGGGGGAGGGGCTATGATATCATATCCACAGCAGCTGTGT
GGTATAATATGTGTATTTTGATTCGTTCGTTATTTGCCTGGTGCTCTTCG
TACAGAGGCTGGGGCTTCCTCTGCTGTTGGTTGGAATTGGTTTTGTGTTG
TTTACGTGAGGGTAGGAACCAGACAAGAGAACAGAGGACTATTAATAGAG
CACTACGAGAGCTGATGTGTATACCTCTCTCTGGACTAGACTGAGAGCAT
GCAGGGCTCTACTGGTGACTCTCTTGACTCTCGAGTATGTACCTGAGCTG
TGTGTTTTGTGTGTTTTGTGTGTTTTGTGTGTAAAATAGACACCTAATAT
GCTCGTGCTGCTGTTGCTGCTGCACATATAACATAGAGCACTGCGTTCCA
ATCCGATTCCTACTACAAGCGGTGGAAGCCTTGCTCGGCCATTGCAATCA
CTATCCTTCGTTTTTTACTGGTATCTCTCTGCGAGAGTCTGTGCTCCTCT
CGAGCGCGCGTTATATATTGACAAAGGCATCGCTTTAACCGGCCCCCGAC
GGTGGAAAAAGTAGAGAGAGGAGGATAAGAGAGAGGGGGGTGAAGAGAGA
GAGAAAAGGCCGGTTTATGAACGAGAGAGAGGGGGGAGAGAGGAAAACAC
TTGTGTCGATGACCCATCAGCGAAATAAGTAGGGCCCGTTTTTATGAAAC
TGTAACCTCTATCATGCAGTGCTACTGCTGTTTTACAGAGAGAATTGTTA
CTTGCAGTTTTAGTATGTCATCACACTTAACAGTATTAATAGTACGTACC
GCTGGAGTGTATGTGCCCGCCAGTGGCAACCGCAGAGCTCAATAGCTCAT
GCCAAATGTACAGCGGTCCCCTATTGTTTGCGCTGCTGTGTACGACACAC
GCGACCGAGATATCTCACAAACTTAGCCTCAGTTTTATCAAATTATTGCT
CACACAGAGCATCGACCAACTCCATCGAACTCGCAGCTGGCGTACAGCAG
TACTCGTACTTGTACTGAACTTCTTGACTGCTGCTTACAGAGCCTCTGTG
GGCAGGCCACAAGGAGGAAACCACCAACTTACGTTATGAAATATGCTAAT
CATCGAAATCAAATTGGCTATTTATAGTCACCCAATCATCTTATCACTAT
ACGCCAGTCAGCCAATCAGCCAATCAGCTAGCTAACCAATTTAGCAAATA
ATTTATTCTCGCACCCGCCACCCCCGCCCTTCCTACGAGTATATATATAG
CTTGATTTGTGCGGAGGTATCATATGTATGATAGGTGTGCATGTAGGCCG
GGGGAAAATAACTCGTGTATCGTCGTGGCACTTGGTGGCGGAGTGCATGA
AGTATTCCCGCGGCCGAGGGCGCAGGCCAAAGAACCAGCGGCCTTGCGCC
CACGACCGACTATTAAATAGGTCGATTTCCAGGCACCCTTCGCCAACACC
CCCCCCGACAGCAGCAGTAGGAGCAGTAATTGGTTCCACTACAATAGAGG
ACATATAAAACCCGCAAGTACGCGCGATCGAAGTATCACACTCAGCTTGC
AAAGATGAGATTCGACGAAATCCTCGATCTCAACGAAATACTCGATCTCA
CCAAGCTGTTTTATTTTTTATTTTTTATAGATATGGTAGTCTTCGCCTTT
CAAGTCGGCCCGCTCTGTACTCATAGTAATTTGTGTATGAAATAAGGATA
ACAACAGCCGTCGACGTAAATTCAACTAACTGATTCAATGTTTGGCCCCA
TCGAGCCCAACCTAAACCTTGTTTTTTTGAGGAAACCACGACGGGTGCTA
AGGAGCGCTACGCCGAACGAGCCCAACGCCGCTAAAAAAATGAAGATACG
TGTAATAGAGCGGTCTGATGCCCCTGGCCACGAACACAACAAATTTGGGT
TTGAACCAATCCCTAATATTCGGAAGGATAAGGAAATACAGAGACGATGA
TAGCCGGCGGCACAGAATGCCCAGTGTGGCTATGTAGAGTACAGCGTGGA
CGTACGAGCAAAACACAATCCACTAAGAAATTGAGGCTCACTCTTTCTGG
GTGTTAAAAAACTTAGATTATTACAATCATGCTCAACGGCGAGCGATACA
CTAAATAAATCCTACGGGAAGATAATAGCCTATGCGCATGATTGGCACAG
CGGTAAGGTTCCAGCCTTGCTAAAGAGTAGGCGTTTCTTGTTTCCGGGGC
CATGCTGTTCATTCGGCGGAGCGACGGTTTCATTTCGGTTGTGCGGTCCG
TCGGTCGATGGTTCGGTCGGTCGGTCGGTCGGGCCAGAGCTCTGTTTATT
GCGTAAACCAGGCACGCTTTCGTGGGGAAGGCAGGCGGGCCGAGCCGCAA
TCAAACGCACGGACTATACCGGTCATCAATCAGTGCGGCTGGGCTGCATT
TTATGCGTTCGTCATACAAACAACAAAAGACAGCGGCGGTGGCGGCAGCG
GTGGTGGTGGTAGTGGTAGTGGTGGCGGCTCCGGCAGCGGCGGCGGTGGC
GGTGATAGTGGTGATGGTGCTAAAAAAATGCAAAGCTGCTGTGCCTGCCA
GGGGAGTAAAGTACCCTGGACCCTTATTCGGTCGAGGACTGCCAACCATT
GCATTTCTCCCGCGGGGTGCATATGTAGCGTGGTCGTACTTCAGAGAGAG
TAGCGCCGTTGTTCCGTGCCTTTGTCCTGAAAGCAAGCTTTCATTGCCTG
ACAAATTAGACTCTTGATAAGAAAGAAAGGAAGCTGTATACGAAAACGAG
AATCTATGCGCTATGCGGTCGCGACAAGGCTCTCTGAGGTGCATCCGAAC
CTCGACTACTACGCATCCACGGGGGCTAAACTTTTGTTTGCTATTTTCGA
CGTACGCTGCATCAGTCCTCCGTTCTTTGGACCACTTATTAATACGGTGC
CTTTCCTTTTTCTCAGTGGATGCCCGTGGCATAAGCCGCCGATGCCCAGT
CGACCAAACACCGACAACGTAAAAAAACAAAAAAAGTCACGATTTTTAGC
CGCCACAATAATATTTTCTGATGAAATTATTTTCCTGTGCCCCCCTCCCC
CCCCCTACCCCACTGCTGCTGCCACTGTCGCCACCGCCCTTCGCCCCTTT
CGGTTATATTCTCGCTTTTCTCTCCCCCCCCCCCCGGTGGTGGTGGTATT
GGTGGTGGTGGTGATGCAGTGTACGGGTTATGCGTTCCATGCGCTGTGGC
GACGGCTAGGAATCGCATCGACGGGTCGTCGTGGTGCGTCAACCTCCTGT
GCCTCAACGTCTGCGCGGCCAGGAGCATCATCCGCCATGGCTATGGCATC
AAGGTTAGACGCGTGACCATGCATGCACTCGCAGCACCTTTAGGCTGGGG
GCTTTAGGCCCTCTTTAGTGACGGGGTCGTGAAATCAGGCTGGGAGATGG
AGGGTTTGAGTGAAACGGTTGGATTGCGAACCCGCTCTGGAGGCGTCTTA
GAGTAAGGGGGGGCGGGGGTACGAGGAGGCCGGCTTTGTAGGAAGGTGCG
GCGAATAGTCCCAAGAGATGGGCGGGGCAGGAGGGCTGTTTTACTATGTC
GTCATTTTAGGGCAGCGCCAAGTGCAATCGGTTAGCTTGGAGCTGTTTCG
TTTTTCACCTCGAATTGTTTTTCACGCTCAGACCCAGACCGTCGTTTTTT
TGTGTTACGTAACTGTCTGCCTGCCGCCCACCCAGCCCCCCCATCCTCCC
TCCTCCACCCCCCCCCATCCCCGACGGTTGCATACCGCACGAAACATGTG
ACAGGGACACTGCTGCGCAGACATAATGTGCAGCATGTTGTGCACACCGT
GCGTGGCGTGCCAGCTGCTGGGGGAGACGGAGAAGCGGGGGCCTATCCAC
GACCACTGGAGGGAGGGGTCGAATCGGGCGAATATCGAGCAGCCGTGGAA
GTTTGGGATGTTCAACTGCTTCGACGACTGCACCACCTGTGAGTCGCACT
GTGCCCTCCCGCTCGACCGCTAGGGTAGTCAGTGACGGGAAAACCATACC
ACGCCGCATCGCACCGCACGGCACCGCACCGTACCTCTCCACTGCTACGG
TAGTCGATGGTGGGAAATAATCTCGATCTCTTCTGTCTGTTTTCGTTCTT
GTTGTCGTTGTTGTTGTTGTTGTCATTCCTGTTACTTGCCATTGTTCATG
TTCCTCGTCTTGTTCCTGCTCTTGTTTTTTGTTCTTGTGTTTTTTGTTCT
TGTTTTATGTTCTTGTTATTTGTTCTTAAGTCATGTGCTTGTTCTTGTTG
CTTGTTCTCGCTCGTGTTCATGTTCGTGAACGTGCTTTTTTATTTTATTT
TTTATTTTATGTGCGTTTTTCTTGTGCTTTTCCTATTCCTGTTTCCCTCC
CTCTCCTCCGTTTTCCCCTGCTCCTTCGTCAATGTGTTTTGTCTGTTTTT
GTTTTTTTTAACACGATGTTGTGTGTCTGCGCGCGCGTTATACATGTGTG
CATATGGTTGCTTCCCCCTGTTTCCGTCGCTGCGGCGTACCAGGCGGGTA
CGGGTGCCTCTGCCCGATGCCCGCGGTGGGGACAATACGCACTCAAATGG
ACGAGTCGGACTGGCTGTTCAACTGCTGCTGCCTCAACCCGTGCATCGCG
AGGAGCCTTGTACGCAGGAACTACAACATCGAGGTTTGTGCTAAATGTGC
TGGGCTGTTCGCGGGTCGGGTCAAACCTAGAGGGTCGGGTCGGGCCACCT
AGCCCGACCCCGACCCGTCACGTACTATTTTTAAGACCTCCTGACCCGAC
CCGTCCCGACCCGACCCGACCCGACCCGACCCGACCCGACCCGACCCGAC
CCGACCCGACCCGACCCGACCCGACCCGACCCGACCCGTGAGGTCGGGTC
ATGACCCGTGAACCTCCCTGAAAAAGTGCAAGTAGGGCCTGTGTTTTTTT
CTTTAGGGCGCCGCTGAAGCCAATGGTACCAATCACCTACGTTCCCCGCC
TCACGTCCGCCGGTTTCCGTGCCTACATACTGTAGCGTCTCGCGACCAGT
TTTGTTACCCCCATGGCACCCCACACTTTTCACTGCTCTGGTGCACGCAT
TCCTCACGCGCCGTGTGCTCAAGTGTATTTGGTGTGTGTCCGCGTGTCGT
GTGCGTGCGTGTGCGTGCGTGTGCGTGCGTGTGCGTGCGTGTGCGTGCGT
GTGCGTGTGTCTGCCTGCGGGGTTCAAGTTTTGCTCGTTGTGTGTGCGGT
GCGAAAGGCCCACGTTTTCCGGTGTCCGGAATAGCGTGGCCTCGCGGACA
ATCACCCTTTTCGTTTTTTTTGTGTTTATAAAGTCAGGAGTGGAGGGCGC
CGCCGCCCTCCGGGGCCCGACAAATTCCACAGCCGTTTTCGTGCTGTGTC
GTGCTGTATCGCGGGGCAAGCCTTGGAGTCGTGGGAACCGGTGCCATGCC
CTCCCCCCTGCATGTGCCGCGTACAGTACGTACTGCAGGTCATGTTCTCC
AGCGGCCATTACTCTTACGTGCTTTCGTGGAAATCGTGGCTGTTGGGAGA
AACGCGGAATTGTTGAATCCGCCGCGTTTGGAGTTCTCGTCTTGGAGGTT
GTCTCGGGCCCTGCTTGTCTTGCCCCCCCCCCCCCCCCTCTCCCAATCCC
TCGTGTTGCTTACCTTCCCCCCCCGCCTCGCCTCCCCTCTCTCCCCTACC
CTGCGTGTTGCTTTTGCTTTCCTCTACCCCTTCTTCTGTTTCTTCGTCCT
GTCTGTCGTCTGTTTATTCTTCTTCTTGCTCTTGCGGGGCCTTTGTCCAT
TTTTTTCGCGGCGATGTGTTCCTTACAGGGATCGGACTGCGCAGACCTCT
GGCTCACGTGCTTCTGCTTCCCGTGCTCCATCTCCCAGATGCTTAACGAG
ACGCAGCACCGCGGAAAAACGAGCGGTGCCCCGGGGTTGAACACCGTGTC
CCGTTGAGGCCCACCGTAGCCCCCCCCCCACCCACCCACGTCTCGAAAGG
GATGCGTGGTCAATGGTCAAATGACTAAGG
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Coding sequence (CDS) from alignment at S-latissima_F_contig1045:31037..38316-

>mRNA_S-latissima_F_contig1045.402.1 ID=mRNA_S-latissima_F_contig1045.402.1|Name=mRNA_S-latissima_F_contig1045.402.1|organism=Saccharina latissima SLPER63f female|type=CDS|length=1644bp|location=Sequence derived from alignment at S-latissima_F_contig1045:31037..38316- (Saccharina latissima SLPER63f female)
ATGATGGCGCGCAAGAGCAAGAGCGGGCGGAGCAGCGCGGGCAGCGACAC
TCGGTCGAACGCCTCTGGACGATCAAGGCGATCGACCAGGTCCCACAAGT
CGAGGGCCTCTCGCTCCGCCCCATCTTCCCGGGCCACCACCACCCAGCCC
ATGGAGATGGCCGTGGACGACGCTGGGGGGGACCTGCCCTCGCAAAAGTG
GCAGTCTTCCATCTGCTGTGCTGGGGGGTGCAAGTCACGCGCGCAAGAGC
AAGAGCGGGCGGAGCAGCGCGGGCAGCGACACTCGGTCGAACGCCTCTGG
ACGATCAAGGCGATCGACCAGGTCCCACAAGTCGAGGGCCTCTCGCTCCG
CCCCATCTTCCCGGGCCACCACCACCCAGCCCATGGAGATGGCCGTGGAC
GACGCTGGGGGGGACCTGCCCTCGCAAAAGTGGCAGTCTTCCATCTGCTG
TGCTGGGGGGTGCAAGTCACTGTACGGGTTATGCGTTCCATGCGCTGTGG
CGACGGCTAGGAATCGCATCGACGGGTCGTCGTGGTGCGTCAACCTCCTG
TGCCTCAACGTCTGCGCGGCCAGGAGCATCATCCGCCATGGCTATGGCAT
CAAGTGTACGGGTTATGCGTTCCATGCGCTGTGGCGACGGCTAGGAATCG
CATCGACGGGTCGTCGTGGTGCGTCAACCTCCTGTGCCTCAACGTCTGCG
CGGCCAGGAGCATCATCCGCCATGGCTATGGCATCAAGGGACACTGCTGC
GCAGACATAATGTGCAGCATGTTGTGCACACCGTGCGTGGCGTGCCAGCT
GCTGGGGGAGACGGAGAAGCGGGGGCCTATCCACGACCACTGGAGGGAGG
GGTCGAATCGGGCGAATATCGAGCAGCCGTGGAAGTTTGGGATGTTCAAC
TGCTTCGACGACTGCACCACCTGGACACTGCTGCGCAGACATAATGTGCA
GCATGTTGTGCACACCGTGCGTGGCGTGCCAGCTGCTGGGGGAGACGGAG
AAGCGGGGGCCTATCCACGACCACTGGAGGGAGGGGTCGAATCGGGCGAA
TATCGAGCAGCCGTGGAAGTTTGGGATGTTCAACTGCTTCGACGACTGCA
CCACCTGCGGGTACGGGTGCCTCTGCCCGATGCCCGCGGTGGGGACAATA
CGCACTCAAATGGACGAGTCGGACTGGCTGTTCAACTGCTGCTGCCTCAA
CCCGTGCATCGCGAGGAGCCTTGTACGCAGGAACTACAACATCGAGGCGG
GTACGGGTGCCTCTGCCCGATGCCCGCGGTGGGGACAATACGCACTCAAA
TGGACGAGTCGGACTGGCTGTTCAACTGCTGCTGCCTCAACCCGTGCATC
GCGAGGAGCCTTGTACGCAGGAACTACAACATCGAGGGATCGGACTGCGC
AGACCTCTGGCTCACGTGCTTCTGCTTCCCGTGCTCCATCTCCCAGATGC
TTAACGAGACGCAGCACCGCGGAAAAACGAGCGGTGCCCCGGGGTTGAAC
ACCGTGTCCCGTTGAGGATCGGACTGCGCAGACCTCTGGCTCACGTGCTT
CTGCTTCCCGTGCTCCATCTCCCAGATGCTTAACGAGACGCAGCACCGCG
GAAAAACGAGCGGTGCCCCGGGGTTGAACACCGTGTCCCGTTGA
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