prot_S-latissima_F_contig1045.402.1 (polypeptide) Saccharina latissima SLPER63f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-latissima_F_contig1045.402.1
Unique Nameprot_S-latissima_F_contig1045.402.1
Typepolypeptide
OrganismSaccharina latissima SLPER63f female (Saccharina latissima SLPER63f female)
Sequence length274
Homology
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: D8LD13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD13_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 1.810e-128
Identity = 159/214 (74.30%), Postives = 184/214 (85.98%), Query Frame = 0
Query:   60 DLPSQKWQSSICCAGGCKSLYGLCVPCAVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEKRGPIHDHWREGSNRANIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTSGAPGLNTVSR 273
            DLPSQKW S++CCAGG KSLYGLCVPC +ATAR+R+DGSSWCVN +CL+ CAAR+I+RHGYGIKGHCCADI+CS++C PCV CQLLGETEKRG ++D W + S R+  EQPWKFG+FNC DDCTTC YG  CPMPAVGTIRTQMD+SDW+FNC C+NP IARSLVR++YNIEG+D AD  LTC CFPCSI+QMLNETQHRG  +G PG N V R
Sbjct:   61 DLPSQKWHSAVCCAGGIKSLYGLCVPCGLATARHRLDGSSWCVNAMCLSPCAARNIVRHGYGIKGHCCADILCSLVCAPCVTCQLLGETEKRGCVYDSWNDQSARSRREQPWKFGLFNCLDDCTTCSYGFFCPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQSYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTGCPGFNAVER 274          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: A0A835YTR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTR6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.690e-63
Identity = 95/192 (49.48%), Postives = 125/192 (65.10%), Query Frame = 0
Query:   79 LYGL-CVPCAVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEKRGPIHDHW-REGSNRANIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTSGAPGL 268
            +Y L C PCAVATA  R DGSSW  N   +N C AR+++R GYGI+GHCC+D++C+ L  PC+  QLL ET +RG + DHW R    R+     WKFG+    +D     Y    P  A+G++RT +D SDW+FNCC LN C AR++VR  YNIEG+   D+  +CFC PC+ISQM+ E QHRG+ +G   L
Sbjct:    1 MYSLFCPPCAVATAVTRFDGSSWANNCCFVNPCMARNVVREGYGIEGHCCSDLLCTCLFLPCMTGQLLAETAERGSVIDHWARSNRYRSPTLTQWKFGLCGFTEDPGKLFYALCMPWCALGSVRTDLDGSDWIFNCCFLNSCAARAMVRHAYNIEGTTANDVATSCFCLPCAISQMMIEVQHRGRVNGPERL 192          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: A0A7S2V1M3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1M3_9STRA)

HSP 1 Score: 176 bits (445), Expect = 9.020e-51
Identity = 87/219 (39.73%), Postives = 122/219 (55.71%), Query Frame = 0
Query:   48 QPMEMAVDDAGGDLPSQKWQSSI--CCAGGCKSLYGLCVP-CAVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEKRGPIHDHWREGSNRANIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTS 263
            QP  M V     + P + W+S +  CC+     ++  C+P CAVA AR + DGS+ C N++C+ + A R+IIR GY IKG C  D++ ++ C  CV  Q++ E E RG +   +  GSNR   E PWK  +F+   + +   YGC CP  A+   RT  D SD  FN  C  PC+ARS++R  YNIEGS   D+     C  C   Q++NE   RGK +
Sbjct:    3 QPQVMMVQVT--EAPQEDWKSGLFGCCSSPKNLIFACCLPWCAVADARTKFDGSNCCFNVMCVGIVAGRNIIREGYKIKGGCIGDLIATLFCPVCVMTQMMNEVESRGKVTAQY--GSNRPATEVPWKHSIFDICFNSSNFIYGCCCPSCAIAQARTDFDGSDCCFNFLCFTPCLARSVIREGYNIEGSCIMDILCPWLCVECVACQLMNEVSDRGKVT 217          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: A0A7S2XYH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYH0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.650e-47
Identity = 95/221 (42.99%), Postives = 127/221 (57.47%), Query Frame = 0
Query:   48 QPMEMAVDDAGGDLPSQKWQSSIC-CAGGC--KSLYGLCVPC-AVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEKRGPIHDHWREGSNRANIEQPW-KFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTS 263
            Q +E A+ +A  D   ++WQ+ +C CAGG      YGL  PC A+ATAR   DGS+WC N L     AAR IIR GY IKG   +DI  ++ C  C A QL+ E E RG +   +  G+ R    QPW K G+ + F +     +G  CP  A+   R+  D S++ FNCCC++PC+ARS++R  YNIEG+   DL   C C  C+  QMLNE   RGK +
Sbjct:   19 QAIETAIAEAATD---EQWQNGLCQCAGGSFGTCFYGLFCPCCAIATARTYYDGSNWCFNCLVTPHLAARDIIREGYNIKGSWLSDIFLTIFCAGCSAVQLMNEVETRGLVSADF--GTARPPDPQPWTKKGVCSNFGNFF---FGMCCPHCAISQARSSFDGSEFCFNCCCVSPCLARSVIREGYNIEGNCFGDLIYPCCCPSCAACQMLNEVDERGKVN 231          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: A0A7S4D5S2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5S2_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 6.410e-19
Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 0
Query:   45 TTTQPMEMAVDDAGGDLPSQK----WQSSI--CCAGGCKSLYG-LCVPCAVATARNRIDGSSWCVNLLCLNVCAARSIIRHGYGIKGH-CCADIMCSMLCTPCVACQLLGE 147
            TT Q +    +D G + P ++    W + +  C       +YG  C  CA A+AR+++DGS+WC NLLCLN CAAR I+RH Y IKG  CC D+  +  C PC  CQLL E
Sbjct:   37 TTPQRLPPTNEDDGDEEPEEELLVDWDNGLFQCLEDPKTCVYGCFCPQCAHASARSKLDGSNWCFNLLCLNPCAARYIVRHTYKIKGTGCCGDVCRAAACGPCATCQLLAE 147          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: UPI001CF6FFB7 (cornifelin-like n=1 Tax=Thunnus albacares TaxID=8236 RepID=UPI001CF6FFB7)

HSP 1 Score: 73.6 bits (179), Expect = 1.820e-12
Identity = 42/122 (34.43%), Postives = 58/122 (47.54%), Query Frame = 0
Query:  168 EQP---WKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIA----------------RSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTSGAPGLNT 270
            EQP   W+ G+F+CF++ +TC YG  C      T+  +  E++ L  C  L+P I                 RS VR  Y I+GS C D+  +CFC  CS  QM  E +HR K      + T
Sbjct:    3 EQPLTDWESGLFDCFEEVSTCCYGFWCCPCLACTVSNRFGENNCLPLCDILSPSICAAFGIPLFVPPAAVSLRSAVRNKYGIKGSICKDIAASCFCVWCSWCQMHRELKHRKKVPAIINIQT 124          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: I1KL84_SOYBN (Uncharacterized protein n=3 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1KL84_SOYBN)

HSP 1 Score: 71.6 bits (174), Expect = 6.650e-12
Identity = 36/107 (33.64%), Postives = 49/107 (45.79%), Query Frame = 0
Query:  171 WKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLN-----------------PCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRG 260
            W  G+  CF DC++C     CP  + G I   +D+       CCL+                  C+ R+ +RR Y IEG  CAD  L+CFC  C++ Q   E Q RG
Sbjct:   10 WSSGLCGCFSDCSSCCLTFWCPCASFGRIGEIVDKGT---TSCCLHGSLFCLLGGFSYLAGIYACMYRTKIRRQYGIEGHQCADFLLSCFCSACTLCQEYRELQARG 113          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: I1KL83_SOYBN (Uncharacterized protein n=4 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1KL83_SOYBN)

HSP 1 Score: 72.0 bits (175), Expect = 6.870e-12
Identity = 38/120 (31.67%), Postives = 53/120 (44.17%), Query Frame = 0
Query:  171 WKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLN-----------------PCIARSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKTSGAPGLNTVSR 273
            W  G+  CF DC++C     CP  + G I   +D+       CCL+                  C+ R+ +RR Y IEG  CAD  L+CFC  C++ Q   E Q RG    A  +  + R
Sbjct:   10 WSSGLCGCFSDCSSCCLTFWCPCASFGRIGEIVDKGT---TSCCLHGSLFCLLGGFSYLAGIYACMYRTKIRRQYGIEGHQCADFLLSCFCSACTLCQEYRELQARGFDVSAECIYRLER 126          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: UPI001448514A (cornifelin homolog A-like n=3 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001448514A)

HSP 1 Score: 70.9 bits (172), Expect = 1.950e-11
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 0
Query:  171 WKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWL--FNCCCL-NPCIA-------RSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGKT 262
            W  G+F+CF+D ++C YG  C      T+  +  E+  L  F+ CCL +PC+        R  +R  Y I+GS C D+  TC C  C+  QM  E +HR +T
Sbjct:    9 WNTGLFDCFEDASSCCYGFWCGPCLASTVSERFGENRCLPLFDICCLKSPCLPSPAVLSLRVAMRNRYGIKGSLCKDIIATCCCEWCAWCQMHRELKHRRQT 110          
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Match: UPI0011C0D6FD (PLAC8-like protein 1 n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C0D6FD)

HSP 1 Score: 71.2 bits (173), Expect = 7.150e-11
Identity = 37/112 (33.04%), Postives = 54/112 (48.21%), Query Frame = 0
Query:  166 NIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIRTQMDESDWLFNCCCLNPCIA----------------RSLVRRNYNIEGSDCADLWLTCFCFPCSISQMLNETQHRGK 261
            N    W  G+ +CF+D +TC YG  C      T+  +  E++ L  C  ++P I                 R+ +R  YNI+GS C D+ ++CFC  CS  QM  E +HR K
Sbjct:  108 NQPTDWNTGLCDCFEDASTCCYGFWCCPCLACTVSGRFGENNCLPLCDIISPAILTACGIPMVVPPAVLSLRAAIRHKYNIKGSLCKDIGVSCFCIWCSWCQMHRELKHRNK 219          
The following BLAST results are available for this feature:
BLAST of mRNA_S-latissima_F_contig1045.402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD13_ECTSI1.810e-12874.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTR6_9STRA2.690e-6349.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1M3_9STRA9.020e-5139.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2XYH0_9STRA1.650e-4742.99Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4D5S2_HETAK6.410e-1944.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001CF6FFB71.820e-1234.43cornifelin-like n=1 Tax=Thunnus albacares TaxID=82... [more]
I1KL84_SOYBN6.650e-1233.64Uncharacterized protein n=3 Tax=Glycine subgen. So... [more]
I1KL83_SOYBN6.870e-1231.67Uncharacterized protein n=4 Tax=Glycine subgen. So... [more]
UPI001448514A1.950e-1136.27cornifelin homolog A-like n=3 Tax=Epinephelus lanc... [more]
UPI0011C0D6FD7.150e-1133.04PLAC8-like protein 1 n=1 Tax=Sparus aurata TaxID=8... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Saccharina latissima female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006461PLAC8 motif-containing proteinPFAMPF04749PLAC8coord: 171..255
e-value: 1.5E-13
score: 51.5
IPR006461PLAC8 motif-containing proteinTIGRFAMTIGR01571TIGR01571coord: 170..257
e-value: 6.0E-14
score: 50.7
IPR006461PLAC8 motif-containing proteinPANTHERPTHR15907FAMILY NOT NAMEDcoord: 42..154
coord: 165..264
NoneNo IPR availablePANTHERPTHR15907:SF21PROTEIN PLANT CADMIUM RESISTANCE 10coord: 42..154
coord: 165..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-latissima_F_contig1045contigS-latissima_F_contig1045:31110..38238 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Saccharina latissima female2022-09-29
Diamond blastp: OGS1.0 of Saccharina latissima female vs UniRef902022-09-16
OGS1.0 of Saccharina latissima SLPER63f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-latissima_F_contig1045.402.1mRNA_S-latissima_F_contig1045.402.1Saccharina latissima SLPER63f femalemRNAS-latissima_F_contig1045 31037..38316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-latissima_F_contig1045.402.1 ID=prot_S-latissima_F_contig1045.402.1|Name=mRNA_S-latissima_F_contig1045.402.1|organism=Saccharina latissima SLPER63f female|type=polypeptide|length=274bp
MARKSKSGRSSAGSDTRSNASGRSRRSTRSHKSRASRSAPSSRATTTQPM
EMAVDDAGGDLPSQKWQSSICCAGGCKSLYGLCVPCAVATARNRIDGSSW
CVNLLCLNVCAARSIIRHGYGIKGHCCADIMCSMLCTPCVACQLLGETEK
RGPIHDHWREGSNRANIEQPWKFGMFNCFDDCTTCGYGCLCPMPAVGTIR
TQMDESDWLFNCCCLNPCIARSLVRRNYNIEGSDCADLWLTCFCFPCSIS
QMLNETQHRGKTSGAPGLNTVSR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006461PLAC_motif_containing