mRNA_P-littoralis_Contig163.73.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 122 bits (306), Expect = 8.970e-30 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 1
Query: 4 CCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREV 387
CC+++RP M H GF+ F+G LSP YV T+ T LD L + V+ +++ L+ + C +G+ G F G Q DLT+ G E+ T TVS++ +G T++ R+ L +AFPGTHTA D+ PWI E+
Sbjct: 214 CCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEEL 341
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.030e-29 Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 4 CCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREV 387
CC+D+RP + GF+ F+G LSP YVT T+ KST + LD L V ++++ L+ + +G+ GPF G Q DLT+ G E+ T TV+F+ +G T+M R+ L +AFPG+HTA D+ PWI ++
Sbjct: 21 CCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKL 148
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.230e-29 Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 4 CCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREV 387
CC+D+RP + GF+ F+G LSP YVT T+ KST + LD L V ++++ L+ + +G+ GPF G Q DLT+ G E+ T TV+F+ +G T+M R+ L +AFPG+HTA D+ PWI ++
Sbjct: 216 CCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKL 343
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.740e-29 Identity = 55/127 (43.31%), Postives = 81/127 (63.78%), Query Frame = 1
Query: 4 CCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIRE 384
CC+D+RP + GF+ F+G LSP YVT T+ KST + LD L V ++++ L+ + +G+ GPF G Q DLT+ G E+ T TV+F+ +G T+M R+ L +AFPG+HTA D+ PWI +
Sbjct: 1300 CCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEK 1426
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 119 bits (299), Expect = 6.710e-29 Identity = 52/125 (41.60%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 4 CCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWI 378
CC+++RP M + GF+ FVG LSP YV T+ +T + +LD L ++ ++ L+ + C +G+GG F G Q DLT+ G E+ T VS++ +G T++ R++L T+AFPG+HTA D+ PWI
Sbjct: 25 CCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWI 149
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.270e-28 Identity = 53/125 (42.40%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 4 CCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWI 378
CC++ RP M + GF+ FVG LSP YV T+ +T + +LD L V ++ L+ + C +G+GG F G Q DLT+ G E+ T VS++ +G T++ R++L T+AFPG+HTA D+ PWI
Sbjct: 25 CCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWI 149
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE) HSP 1 Score: 117 bits (292), Expect = 7.040e-28 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 7 CVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREV 387
C+++RP M H GF+ F+G LSP YV T+ T LD L V +++ L+ + C +G+ G F G Q DLT+ G E+ T TVS++ +G T++ R+ L +AFPGTHTA D+ PWI E+
Sbjct: 331 CINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEEL 457
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 108 bits (269), Expect = 8.720e-25 Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 4 CCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIRE 384
C ++MRP +M + G++ +G L P YV T+ +T ++IL + + + T L+ H +SC KLG+ GPF G Q DLT+ E+ T +VS+I T + R+ L T+AFPG+HTA+D++PWI +
Sbjct: 196 CAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEK 322
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.700e-24 Identity = 52/126 (41.27%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 4 CCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTE-MERLTLTTKAFPGTHTASDVDPWI 378
CC+++RP M + GF+ FVG LSP YV T+ +T + +LDAL V+ ++ L+ + +G+GG F G DLT+ E+ T TVS++ +G T+ + R+ L T+AFPG+HTA D+ PWI
Sbjct: 21 CCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWI 146
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Match: D7G031_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G031_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 1.410e-11 Identity = 51/173 (29.48%), Postives = 74/173 (42.77%), Query Frame = 1
Query: 1 MCCVD-MRPFSMAHRAGFQYFVGGLSPAY-------------------------VTETIHKS----TLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHG--------------TEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREV 387
MC + + P S+ G + FVGGL+P Y VTE + + T + IL L A VR + + L+ H +SC++LGW GPF G+Q D T G E CT +VSF+ + RL + + F G + + WIRE+
Sbjct: 137 MCALQTLDPGSLCSDLGHRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGARAAGTANAILQDLCAGVRREVASALRAHSESCRRLGWSGPFVGLQVDSTGLPGGEGXXXXXXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRQMSHAKETWIREL 309 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig163.73.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig163.73.1 >prot_P-littoralis_Contig163.73.1 ID=prot_P-littoralis_Contig163.73.1|Name=mRNA_P-littoralis_Contig163.73.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=129bp MCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRback to top mRNA from alignment at P-littoralis_Contig163:465860..466246+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig163.73.1 ID=mRNA_P-littoralis_Contig163.73.1|Name=mRNA_P-littoralis_Contig163.73.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=387bp|location=Sequence derived from alignment at P-littoralis_Contig163:465860..466246+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig163:465860..466246+ >mRNA_P-littoralis_Contig163.73.1 ID=mRNA_P-littoralis_Contig163.73.1|Name=mRNA_P-littoralis_Contig163.73.1|organism=Pylaiella littoralis U1_48|type=CDS|length=387bp|location=Sequence derived from alignment at P-littoralis_Contig163:465860..466246+ (Pylaiella littoralis U1_48)back to top |