mRNA_P-littoralis_Contig1622.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: Q94YZ5_PYLLI (Cytochrome-c oxidase n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ5_PYLLI) HSP 1 Score: 318 bits (816), Expect = 1.100e-96 Identity = 167/190 (87.89%), Postives = 173/190 (91.05%), Query Frame = 3
Query: 129 KISFKKSGKGVN*CETERYKWLFGFIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSN 698
K+ K++ K + + G IFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRA+DILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQV LMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSN
Sbjct: 856 KLVLKRAEKALTSARLKDTNGYSGLIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRATDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVILMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSN 1045
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: D1H013_ECTSI (Cytochrome oxidase 2 (Fragment) n=9 Tax=Ectocarpus TaxID=2879 RepID=D1H013_ECTSI) HSP 1 Score: 203 bits (517), Expect = 1.840e-58 Identity = 105/191 (54.97%), Postives = 138/191 (72.25%), Query Frame = 3
Query: 126 FKISFKKSGKGVN*CETERYKWLFGFIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSN 698
FK+ ++ KG++ G +F I S LI YA+SCL +TK +LD AE DY++A IL+K + +L+ V+++L+K+Y+N L+TLR LHK T+LSL RIEQ+NL RLE SPLDIKL PGLLQS+SY+EVLLAK+ELANIKWL ARV+KTLDIPL +E KPFNVQFS+LK ++ D+ N
Sbjct: 76 FKLILDRAEKGLSDAMVNSKTCYLGSVFENSSNDIDSNKLIKDYAQSCLISTKEQLDSAEADYAKAYGILNKSKVILEKVTLNLSKEYDNPYLETLRELHKNTLLSLKSRIEQLNLTRLEFSPLDIKLNPGLLQSRSYKEVLLAKSELANIKWLSARVSKTLDIPLSNEVKPFNVQFSHLKDDNSAIDNDN 266
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: D1H001_9PHAE (Cytochrome oxidase 2 (Fragment) n=3 Tax=Ectocarpus fasciculatus TaxID=43935 RepID=D1H001_9PHAE) HSP 1 Score: 203 bits (517), Expect = 1.920e-58 Identity = 108/190 (56.84%), Postives = 135/190 (71.05%), Query Frame = 3
Query: 129 KISFKKSGKGVN*CETERYKWLFGFIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSN 698
K+ ++ KG++ G +F I S LI YAESCL +TK +LDGAE DY++A DIL+K + +L V++DL+KDY+N L TLR LHK T+LSL RIEQ+NL R E SPLDIKL PGLLQS+SY+EVL+AK+ELANIKWL ARVAKTLDIPL +E KPFNVQFS+LK ++ S N
Sbjct: 77 KLVLDRAEKGLSDAMLNSKTCYLGSVFENSSNEIDSDKLITDYAESCLISTKEQLDGAEADYAKAFDILNKSKVILDKVTLDLSKDYDNPYLGTLRELHKNTLLSLAGRIEQLNLTRSEFSPLDIKLNPGLLQSRSYKEVLIAKSELANIKWLSARVAKTLDIPLSNEVKPFNVQFSHLKDDNDNSIIDN 266
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: E6ZES9_ECTSI (Cytochrome-c oxidase n=4 Tax=Ectocarpus TaxID=2879 RepID=E6ZES9_ECTSI) HSP 1 Score: 209 bits (533), Expect = 7.750e-58 Identity = 109/191 (57.07%), Postives = 141/191 (73.82%), Query Frame = 3
Query: 126 FKISFKKSGKGVN*CETERYKWLFGFIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSN 698
FK+ ++ KG++ G + + I S LI YA+SCL +TK +LDGAE DY++A DIL+K + +L+ V++DL+KDY+N L TLR LHK T+LSL RIEQ+NL RLELSPLDIKL PGLLQS+SY+EVLLAK+ELANIKWL ARV+KTLDIPL +E KPFNVQFS+L+ ++ D+SN
Sbjct: 855 FKLILDRAEKGLSDAMINSKTCYLGSVLENSLNDIDSNKLIKDYAQSCLVSTKEQLDGAEDDYAKAYDILNKSKVILEKVTLDLSKDYDNPYLGTLRELHKNTLLSLASRIEQLNLTRLELSPLDIKLNPGLLQSRSYKEVLLAKSELANIKWLSARVSKTLDIPLSNEVKPFNVQFSHLRDDNSGIDNSN 1045
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: A0A089MYN4_PETFA (Cytochrome-c oxidase n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089MYN4_PETFA) HSP 1 Score: 187 bits (474), Expect = 6.170e-50 Identity = 105/191 (54.97%), Postives = 130/191 (68.06%), Query Frame = 3
Query: 129 KISFKKSGKGVN*CETERYKWLFGFIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTE--SPTSDSS 695
++ F ++ KG+ + + E I SK LI YAE CL+ EL AE DY +A IL K + +L+ V+ DL+KDY+N L+TLR LHK T LSL R EQ+ L ++E SPLDIKLEPG+LQ KSY+EV+LAKAELANIKWL ARVAKTLDIPL +EAKPFNVQFS+L TE S SD+S
Sbjct: 875 ELIFNRAEKGLFDAKLNGTNGYLNSFLNNNFEDIDSKKLISDYAEICLNRANEELVDAEKDYEKAGRILHKTKKILEKVTSDLSKDYDNPHLNTLRNLHKNTSLSLKNRTEQLRLTQIESSPLDIKLEPGVLQLKSYKEVVLAKAELANIKWLAARVAKTLDIPLCEEAKPFNVQFSHLSTEGSSNVSDTS 1065
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: A0A0U1XFI4_SCYLO (Cytochrome-c oxidase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1XFI4_SCYLO) HSP 1 Score: 181 bits (458), Expect = 8.470e-48 Identity = 97/205 (47.32%), Postives = 138/205 (67.32%), Query Frame = 3
Query: 84 SKSFNLF*TR*FR*FKISFKKSGKGVN*CETERYKWLFGFIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSN 698
SK+ + F + ++ ++ KG+ + + + + I S LI YA+ CL+ T E AE DY +AS IL+K + +L V++D++KDY+N L+TLR LHK T LSL+ +E++ L ++E SPL+IKLEPG+LQ KSY+EV+LAKAELAN+KWL ARVAKTL+IPL DEAKPFNVQFS+L TE ++ ++N
Sbjct: 853 SKALSNFNLEGSKISELILNRAEKGLAEAKIKGANDYLNMFLKDNFKDIDSNKLISDYADICLTRTNEESVDAEKDYEKASRILTKTKKILDKVTLDISKDYDNPYLETLRNLHKNTSLSLSNSVERLKLTQIEYSPLNIKLEPGVLQLKSYKEVILAKAELANVKWLAARVAKTLNIPLCDEAKPFNVQFSHLSTEDTSTSNNN 1057
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: A0A0U1XDJ3_9PHAE (Cytochrome-c oxidase n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XDJ3_9PHAE) HSP 1 Score: 174 bits (442), Expect = 1.160e-45 Identity = 91/186 (48.92%), Postives = 126/186 (67.74%), Query Frame = 3
Query: 129 KISFKKSGKGVN*CETERYKWLFGFIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTS 686
++ +++ KG+ + + + + S LI YA+ CL + EL AE DY +AS +L+K + +L+ V+ DL+KDY+N L+TLR LHK LSL I+Q+ L +E SPL I+LEPG++QSKSY+EV+LAKAELAN KWL ARVAKTLDIPL +EAKPFNVQFS+L TE+ ++
Sbjct: 866 ELIVRRAEKGLIDAKINGTNGYLDLFLKTNFDSLNSNKLISDYADMCLLSAHEELIDAEKDYEKASRLLNKSKKILERVTFDLSKDYDNPYLETLRDLHKNIGLSLKNSIDQLRLTEIEFSPLKIRLEPGVIQSKSYKEVVLAKAELANTKWLAARVAKTLDIPLCEEAKPFNVQFSHLNTENSSN 1051
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: A0A3Q8QYF0_9PHAE (Cytochrome-c oxidase n=2 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A3Q8QYF0_9PHAE) HSP 1 Score: 174 bits (442), Expect = 1.160e-45 Identity = 98/190 (51.58%), Postives = 126/190 (66.32%), Query Frame = 3
Query: 129 KISFKKSGKGVN*CETERYKWLFGFIFTRDMEFIKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSN 698
++ ++ KG+ ++ + + I S+ L+ YAE CL EL AE DY +A IL K E +L+ V+ DL+K+Y+N L TLR LHK T LSL IEQ+ L ++E SPLDIKLEPG+LQ KSY+EV+LAKAELANIKWL ARVAKTLDIPL +EAKPFNVQFS+L + +SSN
Sbjct: 872 ELILDRAKKGLIEAKSNGTTNYLNSFLKNNFKDIDSEKLVSDYAEICLIRANEELIDAEKDYEKAGAILKKAEKILERVTSDLSKEYDNPYLGTLRNLHKNTSLSLKDSIEQLKLTQVESSPLDIKLEPGVLQLKSYKEVILAKAELANIKWLAARVAKTLDIPLCEEAKPFNVQFSHLSAK----ESSN 1057
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: A0A8F0K070_9PHAE (Cytochrome-c oxidase n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0K070_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.390e-25 Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 3
Query: 228 IKSKDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLAKDYNNS---CLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFS------YLKTESPTS 686
I L+ +Y C+S + EL GAE DY A+DIL+K E++L V+ D++ + + +D L +L K SL + E + +L L+PLDIKL PGLLQ+ SY+ V+ A AELA +KWL ARVAKTL+I L KPFNV+F YLK + TS
Sbjct: 839 ISVPSLLYNYGNLCVSQAQQELAGAESDYLVAADILTKAENVLAEVTADISNHSDRAEKLYVDQLWLLGKDVAESLVKSREVLEESKLRLTPLDIKLSPGLLQAISYENVVNANAELAYVKWLSARVAKTLNITLLSSVKPFNVEFEDSSLMDYLKENNNTS 1000
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Match: A0A3G5FPR2_9PHAE (Cytochrome-c oxidase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPR2_9PHAE) HSP 1 Score: 113 bits (283), Expect = 1.610e-24 Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = 3
Query: 237 KDLIDSYAESCLSATKAELDGAEVDYSRASDILSKGESLLKAVSVDLA--KDYNNSCLDTLRVLHKKTVLSLTQRIEQVNLMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKT---ESPTSDSSN 698
K L+D Y++ CL E A+V++ + +L + E LL+ + L K + L+ +HK + +R + ++ + SPLDIKL PGLLQ KSY+ +L A++EL N KW+CAR+AKTLD+PL D KPFNVQF +LK+ P +D+ N
Sbjct: 951 KRLLDFYSKKCLEGANEEYKEADVNFKKTISVLLEAEMLLREAELYLETPKVDLHPYFGELKEMHKTAFDDVVKRKNEYYALKEKFSPLDIKLSPGLLQLKSYKGLLNARSELENAKWVCARIAKTLDLPLSDNIKPFNVQFFHLKSLKSGKPCTDNDN 1109 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1622.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1622.1.1 >prot_P-littoralis_Contig1622.1.1 ID=prot_P-littoralis_Contig1622.1.1|Name=mRNA_P-littoralis_Contig1622.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=77bp MMRLNLLMYNSHILKLNPLRRIVAIDGDSTSDGNSGDKKKPKTEDEIKEIback to top mRNA from alignment at P-littoralis_Contig1622:3..857+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1622.1.1 ID=mRNA_P-littoralis_Contig1622.1.1|Name=mRNA_P-littoralis_Contig1622.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=855bp|location=Sequence derived from alignment at P-littoralis_Contig1622:3..857+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1622:3..857+ >mRNA_P-littoralis_Contig1622.1.1 ID=mRNA_P-littoralis_Contig1622.1.1|Name=mRNA_P-littoralis_Contig1622.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=231bp|location=Sequence derived from alignment at P-littoralis_Contig1622:3..857+ (Pylaiella littoralis U1_48)back to top |