prot_P-littoralis_Contig1611.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1611.4.1
Unique Nameprot_P-littoralis_Contig1611.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length172
Homology
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A6G6D7D1_ECTSI (Cytochrome c biogenesis protein CcsA n=7 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7D1_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 3.480e-91
Identity = 144/169 (85.21%), Postives = 160/169 (94.67%), Query Frame = 0
Query:    1 MSIISEHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVILEYE 169
            MSI+SE+I+ ++NS+FISCF+CT  YWSIIS+RDT++ R IAKITSRFATLS+F LL DRW+EFGYFPLSNLYESLLFLSCLLLFVYQVLEYKI+SPVFGGIILPIVLFIT FAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLL++GSSLAILYLVV LE+E
Sbjct:    1 MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFE 169          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A6B7IK16_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7IK16_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.260e-89
Identity = 143/169 (84.62%), Postives = 156/169 (92.31%), Query Frame = 0
Query:    1 MSIISEHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVILEYE 169
            MSIISEHIN  +NSIF+SCF  TL YW+I+S++D+ + R I KITSRFATLSIF LL DRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKI++PVFGGIILPIVLFIT FAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLI+GSSLAILYLV+ LE+E
Sbjct:    1 MSIISEHINLFSNSIFVSCFFSTLAYWTILSMKDSNILRTIGKITSRFATLSIFILLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQTPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFE 169          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A1I9LVC5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVC5_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 5.330e-88
Identity = 137/169 (81.07%), Postives = 156/169 (92.31%), Query Frame = 0
Query:    1 MSIISEHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVILEYE 169
            MS++SE++N +NNS+F+SCFLCTL YWSII ++DT++ R IAK+TSRFAT+SIF LL DRW+EFGYFPLSNLYESLLFL+CLLLFVYQVLEYKI+SP+FGGIILPIVLFIT F +F LPL MQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLV  LE+E
Sbjct:    1 MSLVSENLNLVNNSVFVSCFLCTLAYWSIIYMKDTQILRTIAKLTSRFATVSIFILLTDRWIEFGYFPLSNLYESLLFLACLLLFVYQVLEYKIQSPIFGGIILPIVLFITAFTIFNLPLAMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVGFLEFE 169          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A516ICR2_9PHAE (Cytochrome c biogenesis protein CcsA n=27 Tax=Laminariales TaxID=2886 RepID=A0A516ICR2_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 3.110e-62
Identity = 108/161 (67.08%), Postives = 130/161 (80.75%), Query Frame = 0
Query:    9 NWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVILEYE 169
            N  NN +F  C + T+ YW  +  ++ ++F  +AKITSRFATLS+F  L++RW++FGYFPLSNLYESLLFLSC+LLFV Q LE K +S +FG II+PIVLFITGFA   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++LIIGSS AI+Y+   LE E
Sbjct:   14 NIFNNILFACCLVSTIFYWFSLGFKNIKVFSTLAKITSRFATLSLFVFLLNRWIQFGYFPLSNLYESLLFLSCILLFVSQALESKTQSLLFGCIIVPIVLFITGFAALTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILIIGSSFAIVYVGSFLELE 174          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A8F0F9V5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9V5_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 3.110e-62
Identity = 104/158 (65.82%), Postives = 131/158 (82.91%), Query Frame = 0
Query:   12 NNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVILEYE 169
            NN +FISC + T+ YW  +  ++ ++F  +AK+TSRFA+L +F  L +RW+E GYFPLSNLYESLLFLSC+LLFVYQ+LEYK +S +FG II+PIVLFITGFA   LPLEMQKA+ALVPALQSNWLMMHVSLMMLSY++LI+GS+ +I+Y+   LE E
Sbjct:   17 NNILFISCLVSTVFYWFSLGFKNIKIFGSLAKVTSRFASLILFVFLSNRWLESGYFPLSNLYESLLFLSCILLFVYQILEYKTQSSLFGCIIVPIVLFITGFAALTLPLEMQKANALVPALQSNWLMMHVSLMMLSYAILIMGSAFSIVYVGAFLELE 174          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A2R4QPY5_9PHAE (Cytochrome c biogenesis protein CcsA n=4 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY5_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 1.340e-61
Identity = 104/158 (65.82%), Postives = 129/158 (81.65%), Query Frame = 0
Query:    6 EHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLV 163
             + N +NNS+FI  F+ T  YW  +S +   +F  I KITSRFATLSIF  L+ RW+++GYFPLSNLYESLLFLS +LLF+YQ LE K +SP+FGGI+LP+VL I+GF+   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L+IGS+ +I+YLV
Sbjct:    5 NYCNLLNNSLFILVFISTALYWFRLSFKSITIFNTIGKITSRFATLSIFLFLLIRWIDYGYFPLSNLYESLLFLSFILLFLYQFLESKAQSPIFGGIVLPLVLLISGFSELTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLV 162          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A1L2F1W2_9PHAE (Cytochrome c biogenesis protein CcsA n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1W2_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.210e-59
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0
Query:    6 EHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVILEYEF 170
             + N +NN +F   F+ T  YW  +S +   +F  I +ITSRFAT++IF  L+ RWVE+GYFPLSNLYESLLFLS +LLF YQ LE K +SP+FGGIILPIVL I+GFA   LPLEMQKA ALVPALQSNWLMMHVSLMMLSY++L+IGS+ +I+YLV +L + +
Sbjct:    5 NYFNLLNNILFFLVFISTAIYWFRLSFKFVTIFNIIGEITSRFATINIFLFLLIRWVEYGYFPLSNLYESLLFLSFILLFSYQFLESKAKSPIFGGIILPIVLLISGFAELTLPLEMQKAGALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLVTLLVFSY 169          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A8F0FAP1_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP1_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 5.350e-57
Identity = 96/162 (59.26%), Postives = 126/162 (77.78%), Query Frame = 0
Query:    6 EHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVILE 167
             + N+ +NSIFI   + T+ YW  +     + +   AK+ SR AT+ +F  L+ RW++ GYFPLSNLYESLLFLSC++LFVYQ +EYK +S +FG I+LP+VLFITGFA   LPLEM+KASALVPALQSNWLMMHVSLMMLSY++LI+GS ++IL+L++ L 
Sbjct:    5 NYCNFFSNSIFIFLLISTVFYWFSLRFTKVDFYYKFAKLNSRVATIILFVFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLS 166          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A8F0F862_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F862_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.360e-52
Identity = 94/161 (58.39%), Postives = 120/161 (74.53%), Query Frame = 0
Query:    6 EHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVIL 166
             + N   NS+FI  F+ ++ YW  + I   ++   +AK T+R A LS+F  L  RW  +GYFPLSNLYESLLFL+CLL  V+Q+LEY+ +S  FG IILPI+LFIT FA   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L++GS  +I++L+  L
Sbjct:    5 NYFNIFKNSLFICLFISSIFYWVSLRITKFKMLYTVAKFTARIANLSLFIFLATRWGNYGYFPLSNLYESLLFLACLLSLVHQILEYQTQSKFFGTIILPIILFITSFADLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLLGSLFSIIFLITFL 165          
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Match: A0A2I4Q2E4_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2E4_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 2.140e-50
Identity = 88/167 (52.69%), Postives = 122/167 (73.05%), Query Frame = 0
Query:    3 IISEHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFATLSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFGGIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVVILEYE 169
            I+ ++     N +F   F  T+ YW  +  +  +     A+I S FAT  +F  L++RWV +GYFP+SNLYESLLFLSCLLL ++Q+LEY+ +S +FG ++LP +LFIT FA   LPLEMQKA+ALVP+LQSNWLMMHVSLM+LSY++L++GS  +I++LV+ L  E
Sbjct:    2 IMDDYFTGFKNILFFCLFSSTIFYWFSLKFQILKKLHDFARINSIFATFLLFFFLLNRWVTYGYFPISNLYESLLFLSCLLLIIHQILEYQTQSRIFGALLLPSILFITSFADLTLPLEMQKATALVPSLQSNWLMMHVSLMLLSYAILLLGSLFSIIFLVLFLPSE 168          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1611.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6D7D1_ECTSI3.480e-9185.21Cytochrome c biogenesis protein CcsA n=7 Tax=Ectoc... [more]
A0A6B7IK16_9PHAE3.260e-8984.62Cytochrome c biogenesis protein CcsA n=1 Tax=Clado... [more]
A0A1I9LVC5_9PHAE5.330e-8881.07Cytochrome c biogenesis protein CcsA n=1 Tax=Pleur... [more]
A0A516ICR2_9PHAE3.110e-6267.08Cytochrome c biogenesis protein CcsA n=27 Tax=Lami... [more]
A0A8F0F9V5_9PHAE3.110e-6265.82Cytochrome c biogenesis protein CcsA n=1 Tax=Chord... [more]
A0A2R4QPY5_9PHAE1.340e-6165.82Cytochrome c biogenesis protein CcsA n=4 Tax=Fucac... [more]
A0A1L2F1W2_9PHAE1.210e-5963.03Cytochrome c biogenesis protein CcsA n=13 Tax=Sarg... [more]
A0A8F0FAP1_9PHAE5.350e-5759.26Cytochrome c biogenesis protein CcsA n=1 Tax=Desma... [more]
A0A8F0F862_9PHAE1.360e-5258.39Cytochrome c biogenesis protein CcsA n=1 Tax=Proto... [more]
A0A2I4Q2E4_9PHAE2.140e-5052.69Cytochrome c biogenesis protein CcsA n=1 Tax=Dicty... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002541Cytochrome c assembly proteinPFAMPF01578Cytochrom_C_asmcoord: 69..164
e-value: 9.2E-24
score: 84.4
IPR045062Cytochrome c-type biogenesis protein CcsA/CcmCPANTHERPTHR30071HEME EXPORTER PROTEIN Ccoord: 13..165
NoneNo IPR availablePANTHERPTHR30071:SF1CYTOCHROME B/B6 PROTEIN-RELATEDcoord: 13..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1611contigP-littoralis_Contig1611:4356..4871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1611.4.1mRNA_P-littoralis_Contig1611.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1611 4262..4871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1611.4.1 ID=prot_P-littoralis_Contig1611.4.1|Name=mRNA_P-littoralis_Contig1611.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=172bp
MSIISEHINWINNSIFISCFLCTLTYWSIISIRDTELFRGIAKITSRFAT
LSIFSLLIDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIESPVFG
GIILPIVLFITGFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSL
LIIGSSLAILYLVVILEYEFI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002541Cyt_c_assembly
IPR045062Cyt_c_biogenesis_CcsA/CcmC