mRNA_P-littoralis_Contig161.65.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: A0A6H5LD91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD91_9PHAE) HSP 1 Score: 201 bits (511), Expect = 9.880e-60 Identity = 99/141 (70.21%), Postives = 115/141 (81.56%), Query Frame = 1
Query: 1 ELLKGSNNGILVHGDLKRLAEMYQQTPKTVSKYWRLYKKEKESGEEHSDLHSKRKGNCGRIGVDITALVEALQQVPLNNRTTIRSVAAALNITKSTLWDNLKKLGLRSCSRFLKPYLTDEGKAARLAWALRWVRSGPGGEH 423
ELLKGSNNG L HGD+KR+ +Y+QTPKTVSKYW+LY ++KE+GEE DLH+KRKGN G+ G+DI L EALQ + L NRTTIRS+AAAL I KSTL+DNL LGLRSCSRFLKP L+D+ KA RLAWALRWVRS G H
Sbjct: 4 ELLKGSNNGALSHGDVKRVVAIYKQTPKTVSKYWKLYNQKKEAGEEDPDLHNKRKGNSGQKGLDIATLKEALQDIHLKNRTTIRSIAAALGIPKSTLFDNLNNLGLRSCSRFLKPLLSDDWKAQRLAWALRWVRSSAGDAH 144
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 185 bits (470), Expect = 2.220e-49 Identity = 90/107 (84.11%), Postives = 94/107 (87.85%), Query Frame = 2
Query: 470 FFICKQGQRYYLYEGEDAPIRKVQHKSHVTKVMFLAAIARPRYDSSRNRQFDGKTGIYPFTVQRPAQRNSRNRAAGTMVTHCVDVNRATYKDKLINNVFPDIRAKFP 790
F+ICKQGQRYY YEGE PIRKVQHKSHV KVMFLAA+ARPRYDSSR+RQFDGK GIYPFTVQR AQRN RN AAGTMVTH V+VNR YK KL NNVFPDIRAKFP
Sbjct: 65 FYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYK-KLNNNVFPDIRAKFP 170
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: A0A6H5K9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R2_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.930e-38 Identity = 76/129 (58.91%), Postives = 91/129 (70.54%), Query Frame = 3
Query: 819 DNAPGHRVMADPDVMAAAGQGGGRIELINQPPNNPDTNILDLGFFNSIQSLQDRTTPTKIDERVAAVETAFWAQKTQTLDRGCTTLQSVLQEIMLARGDNTFKLPHLHKLTASRRNQAIPAELPCSQEA 1205
DN P H + ADPDV+AA G I LINQP N P TNILDLGFFN+IQSLQDRTTP +DE + V+ AF Q TLD+ +LQ++LQEI+LA+GDNT KLPHL K A+ ++IP ELP S EA
Sbjct: 4 DNKPSHCINADPDVVAAGTADGWDIRLINQPSNIPHTNILDLGFFNAIQSLQDRTTPRTVDEFIIEVKRAFEEQSPSTLDKVWESLQAILQEIILAKGDNTIKLPHLKKDKAANSGRSIPKELPLSAEA 132
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 144 bits (364), Expect = 2.280e-36 Identity = 76/135 (56.30%), Postives = 95/135 (70.37%), Query Frame = 3
Query: 801 TVLAQQDNAPGHRVMADPDVMAAAGQGGGRIELINQPPNNPDTNILDLGFFNSIQSLQDRTTPTKIDERVAAVETAFWAQKTQTLDRGCTTLQSVLQEIMLARGDNTFKLPHLHKLTASRRNQAIPAELPCSQEA 1205
T+ Q DN P HR+ ADPDV+AA G I LINQP N+PDTNILDLGFFN++QSLQDR TP +DE + V+ AF Q T D+ +LQ++LQ I+LA+G+NTFKLPHL K A+ ++IP ELP S EA
Sbjct: 150 TIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELPLSAEA 283
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.270e-32 Identity = 70/97 (72.16%), Postives = 79/97 (81.44%), Query Frame = 3
Query: 801 TVLAQQDNAPGHRVMADPDVMAAAGQGGGRIELINQPPNNPDTNILDLGFFNSIQSLQDRTTPTKIDERVAAVETAFWAQKTQTLDRGCTTLQSVLQ 1091
TV AQQD+APGHRVM DP+++AAA QG RIELINQP N+PD N+LDLGFFNSIQSLQDRTTPT ID+ VA VE AFWAQ +DR TTLQSV +
Sbjct: 83 TVFAQQDSAPGHRVM-DPEIVAAAAQGR-RIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRVWTTLQSVFR 177
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: UPI000E6FC8C0 (uncharacterized protein LOC113311561 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC8C0) HSP 1 Score: 124 bits (310), Expect = 7.940e-29 Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = 2
Query: 470 FFICKQGQRYYLYEGEDAPIRKVQHKSHVTKVMFLAAIARPRYDSSRNRQFDGKTGIYPFTVQRPAQRNSRNRAAGTMVT-HCVDVNRATYKDKLINNVFPDIRAKFP 790
F++ K+ Q+YYL ED P+R + K +TKVMFLA +ARPRYDS+ N +F GK GI+PFT Q PAQRNS+NR AGTM T + V + + LIN VFP +R+K+P
Sbjct: 12 FYMTKESQKYYLLPEEDEPLRSCKSKCFITKVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKEILSVTKDVIRSCLINKVFPAMRSKWP 119
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: A0A6P6UZX5_COFAR (uncharacterized protein LOC113715904 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6UZX5_COFAR) HSP 1 Score: 120 bits (300), Expect = 5.940e-28 Identity = 59/129 (45.74%), Postives = 82/129 (63.57%), Query Frame = 2
Query: 407 APAANTSFTTSSTSFTWTRSVFFICKQGQRYYLYEGEDAPIRKVQHKSHVTKVMFLAAIARPRYDSSRNRQFDGKTGIYPFTVQRPAQRNSRNRAAGTMVTHCV-DVNRATYKDKLINNVFPDIRAKFP 790
AP F W F++ K+ ++YYL+ E+ P+R + K + KVMFLAA+ARPR+D SRN+ FDGK GI+PF + PA+RNS+NR AGT+ T + V + Y+ LI+NV P IRAK+P
Sbjct: 52 APVFENMFNMVHIDEKW----FYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWP 176
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: UPI000E6FC7BC (uncharacterized protein LOC113359119 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC7BC) HSP 1 Score: 120 bits (300), Expect = 8.270e-28 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 2
Query: 482 KQGQRYYLYEGEDAPIRKVQHKSHVTKVMFLAAIARPRYDSSRNRQFDGKTGIYPFTVQRPAQRNSRNRAAGTMVTHCV-DVNRATYKDKLINNVFPDIRAKFP 790
K+ Q+YYL ED P+R + K +TKVMFLA +ARPRYDS+ N +F GK GI+PFT Q PAQRNS+NR AGTM T + V + + LIN V P IR+K+P
Sbjct: 3 KESQKYYLLPEEDEPLRSCKSKRFITKVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKAILSVTKDVIRSCLINKVLPAIRSKWP 106
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: UPI000CD9D6ED (uncharacterized protein LOC111880928 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9D6ED) HSP 1 Score: 118 bits (296), Expect = 9.010e-28 Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = 2
Query: 470 FFICKQGQRYYLYEGEDAPIRKVQHKSHVTKVMFLAAIARPRYDSSRNRQFDGKTGIYPFTVQRPAQRNSRNRAAGTMVTHCV-DVNRATYKDKLINNVFPDIRAKFP 790
F++ K +RYY GED P+R + K +TK+MFLAA+ARPRYDSS N F GK GIYPFT PA+ +S+NR AGTM T + VN+ + LI PDIRAK+P
Sbjct: 102 FYMSKPSKRYYFVPGEDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKHSSKNRVAGTMETKPILSVNKEVTRSWLIEKFLPDIRAKWP 209
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3) HSP 1 Score: 122 bits (307), Expect = 2.060e-27 Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 2
Query: 470 FFICKQGQRYYLYEGEDAPIRKVQHKSHVTKVMFLAAIARPRYDSSRNRQFDGKTGIYPFTVQRPAQRNSRNRAAGTMVTHCV-DVNRATYKDKLINNVFPDIRAKFP 790
F++ K +RYYL G+D P+R + K +TK+MFLAA+ARPRYDSS N F GK GIYPFT PA+R+S+NR AGTM T + VN+ + LI V PDIRAK+P
Sbjct: 179 FYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWP 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig161.65.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig161.65.1 >prot_P-littoralis_Contig161.65.1 ID=prot_P-littoralis_Contig161.65.1|Name=mRNA_P-littoralis_Contig161.65.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=204bp MYQQTPKTVSKYWRLYKKEKESGEEHSDLHSKRKGNCGRIGVDITALVEAback to top mRNA from alignment at P-littoralis_Contig161:205135..206345- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig161.65.1 ID=mRNA_P-littoralis_Contig161.65.1|Name=mRNA_P-littoralis_Contig161.65.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1211bp|location=Sequence derived from alignment at P-littoralis_Contig161:205135..206345- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig161:205135..206345- >mRNA_P-littoralis_Contig161.65.1 ID=mRNA_P-littoralis_Contig161.65.1|Name=mRNA_P-littoralis_Contig161.65.1|organism=Pylaiella littoralis U1_48|type=CDS|length=612bp|location=Sequence derived from alignment at P-littoralis_Contig161:205135..206345- (Pylaiella littoralis U1_48)back to top |