mRNA_P-littoralis_Contig16.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 143 bits (361), Expect = 2.870e-40 Identity = 85/132 (64.39%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 22 MPSTLSKLYHAAARGSVERTVAVLSRGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASVIGSSRVVRDLLRQGASVS 417
MPSTLSKLY AAA GSVERTVAVLS+GSV+IDGGYGD G+TPLM ASTMGYLRVVRVLLRLG RVSVADNDGATALHLSIVN H +V + + TPL VA+ G + + L+ G S
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNK-HLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGGCSS 131
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 143 bits (361), Expect = 4.570e-40 Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 1
Query: 256 SIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
S ++ GS++ ATT IDRGCG+TNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDG TALHHSVYH HLAVSKDLIEAGADLEAR
Sbjct: 3 STLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEAR 91
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 139 bits (351), Expect = 9.570e-39 Identity = 82/116 (70.69%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 22 MPSTLSKLYHAAARGSVERTVAVLSRGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASVIG 369
MPSTLSKLY AAA GSVERTVAVLS+GSVDIDGGYGD G+TPLM ASTMGYLRVVRVLLR G RVSVADNDGATALHLSIV H +V R + TPL VA+ G
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIV-IKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKG 115
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.240e-38 Identity = 92/160 (57.50%), Postives = 105/160 (65.62%), Query Frame = 1
Query: 22 MPSTLSKLYHAAARGSVERTVAVLSRGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEA 501
MPSTLSKLYHA A GSVERTVAVLS+GSVDIDGGYGD G+TPLM A TMGYLRVVRVLLRLG RVSVADNDGATALHLSIVN H +V + + TPL VA+ G + + L+ GA+V T L+ S L + L+ A
Sbjct: 1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNK-HLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGANVDSEQEGRATPLYISARQGRLEDVRILVGA 159
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.390e-37 Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 1
Query: 256 SIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
S ++ GSVER ATTDIDR CG+TN TPLMVASVIGSSRVV+DLLRQGASVSVADSDGYTALHHSVYH+HLAVS LIEAGADLEAR
Sbjct: 3 STLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEAR 91
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 145 bits (367), Expect = 2.690e-37 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 1
Query: 277 GSVERVTATTDIDRGCGETNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
GSVER ATTDIDR CG+TNQTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY ALHH+VYHKHLAVSKDLIEAGADL+AR
Sbjct: 400 GSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDAR 481
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.470e-29 Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 1
Query: 256 SIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSK 486
S ++ GS + ATTDIDR CG+TNQTPLMVASVIG SRVVRDLLRQGASVSVADSDGYTALHH+VYHKHLAVSK
Sbjct: 9 STLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK 85
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.460e-12 Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 352 VASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
VAS +G RVVR LLR GA VS AD+DG TALH S+ +KHLAVSK L++AGADLEAR
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEAR 93
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 5.310e-12 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 277 GSVERVT-----ATTDIDRGCGETNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
GSVER T+IDR C E T LM A+ G R+VR LLR GA VSV+ DG+TALH ++ ++LAV+K LI+AGA++EA+
Sbjct: 28 GSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAK 114
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Match: UPI001EE58C4A (ankyrin repeat and KH domain-containing protein mask-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE58C4A) HSP 1 Score: 72.0 bits (175), Expect = 1.330e-11 Identity = 49/153 (32.03%), Postives = 77/153 (50.33%), Query Frame = 1
Query: 4 LVSVPNMPSTLSKLYHAAARGSVERTVAVLSRGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNTWHGSVERVTATTDID----RGCGETNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALH 450
L +P L+ A G++ +L + VDI+ G TP+M A+ MG+L V+++L+ G VS+A+ G LHL+ V+ G VE V +D G +TPLM+A + G+ ++V L+ +G VS+ D D LH
Sbjct: 162 LTPLPRDAQAEDDLHQACETGNLSAVRLILCQRRVDIN--CRQSGSTPVMRAARMGHLEVMKLLVNKGANVSLANTPGNNMLHLACVD---GPVEVVQYVLPLDVVDINSRGWNERTPLMIAGITGTLKIVDVLVSKGGDVSLVDKDSNNILH 309 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.3.1 >prot_P-littoralis_Contig16.3.1 ID=prot_P-littoralis_Contig16.3.1|Name=mRNA_P-littoralis_Contig16.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=167bp MPSTLSKLYHAAARGSVERTVAVLSRGSVDIDGGYGDGGQTPLMVASTMGback to top mRNA from alignment at P-littoralis_Contig16:4350..5593+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig16.3.1 ID=mRNA_P-littoralis_Contig16.3.1|Name=mRNA_P-littoralis_Contig16.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1244bp|location=Sequence derived from alignment at P-littoralis_Contig16:4350..5593+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig16:4350..5593+ >mRNA_P-littoralis_Contig16.3.1 ID=mRNA_P-littoralis_Contig16.3.1|Name=mRNA_P-littoralis_Contig16.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=501bp|location=Sequence derived from alignment at P-littoralis_Contig16:4350..5593+ (Pylaiella littoralis U1_48)back to top |