mRNA_P-littoralis_Contig158.127.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5KML5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KML5_9PHAE) HSP 1 Score: 134 bits (336), Expect = 2.600e-35 Identity = 64/114 (56.14%), Postives = 78/114 (68.42%), Query Frame = 3
Query: 234 LGIIFQCLDDIDNMFFTCCTLHNMLHAYDGLDELEPAVEWGGKEGL--HNGWDRSPLLDESITGSTG-SPIGDGNSTPRQKELHFALKNALVAHFEVQRQKNSIRWLKHKAPGR 566
LGI+FQ + IDN+FFTCCTLH+MLHA+DGLDELE EWGG+ GL H WD PLLD+S GST +P D +T + H LKNAL+ HFE +R KN IRWL + G+
Sbjct: 37 LGILFQHENVIDNLFFTCCTLHSMLHAFDGLDELETVKEWGGRAGLGLHGTWDNDPLLDDSTVGSTSPTPADDDGTTTTPQAAHEELKNALMTHFEFRRSKNDIRWLSYATTGK 150
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5L2M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M7_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.060e-31 Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 3
Query: 234 LGIIFQCLDDIDNMFFTCCTLHNMLHAYDGLDELEPAVEWGGKEGLHNGWDRSPLLDESITGSTG-SPIGDGNSTPRQKELHFALKNALVAHFEVQR 521
LGI+FQ + IDN+FFTCCT HN+LHA+DGLDELE +WGG+ GLH+ WD PLLDES GST +P D +T + H LKNAL+AH E +R
Sbjct: 32 LGILFQDKNVIDNLFFTCCTSHNVLHAFDGLDELETVEDWGGRAGLHDAWDNDPLLDESTVGSTSPTPADDDGTTTIPEAAHEELKNALIAHVEFRR 128
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.850e-24 Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 1
Query: 1 YAQKEYTLYDEDGEPFQRKGNYSIVDNGYNQWEILIPPSKFADGDIEIRWSKALESVRKDVECFFGILKGRFRILKL 231
Y++KE+T+Y+ DG P+Q KG Y +VDNGY++W LIPPSK+ ++ +SK LESVRKDVECFFGI+KG FRILKL
Sbjct: 63 YSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKL 139
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 109 bits (272), Expect = 5.750e-24 Identity = 49/77 (63.64%), Postives = 63/77 (81.82%), Query Frame = 1
Query: 1 YAQKEYTLYDEDGEPFQRKGNYSIVDNGYNQWEILIPPSKFADGDIEIRWSKALESVRKDVECFFGILKGRFRILKL 231
Y++KE+T+Y+ DG P+Q KG Y +VDNGY++W LIPPSK+ ++ +SK LESVRKDVECFFGI+KGRFRILKL
Sbjct: 304 YSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKL 380
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 5.130e-21 Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 1
Query: 1 YAQKEYTLYDEDGEPFQRKGNYSIVDNGYNQWEILIPPSKFADGDIEIRWSKALESVRKDVECFFGILKGRFRILKL 231
Y +K + LY+EDG KG Y + DNGY++W+ILI PSK+ + ++ +SK LESVRKDVECFFGILKGRFRILKL
Sbjct: 151 YTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKL 227
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5L135_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L135_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 2.570e-20 Identity = 49/126 (38.89%), Postives = 66/126 (52.38%), Query Frame = 3
Query: 192 FRYLEGPV*NFETNLGIIFQCLDDIDNMFFTCCTLHNMLHAYDGLDELEPAVEWGGKEGLHNGWDRSPLLDESITGSTGS--------PIGDGNSTPRQKELHFALKNALVAHFEVQRQKNSIRWL 545
F L+G + LG ++ +DIDN+F TCC LHNMLH +DG+D E V+W G GLH+ WD PL D + GSTG + + T Q H LK L+ F +++ N I WL
Sbjct: 45 FDILKGRFRILKLRLG--YRSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWL 168
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 3.090e-20 Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 7 QKEYTLYDEDGEPFQRKGNYSIVDNGYNQWEILIPPSKFADGDIEIRWSKALESVRKDVECFFGILKGRFRILKLI*ELFSN 252
+K + +Y+EDG KG Y +VDNGY++W+ILI PSK+ + ++ +SK LESVRKDVECFFGILKGRFRILKL E S
Sbjct: 263 EKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQ 344
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 6.280e-20 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 1 YAQKEYTLYDEDGEPFQRKGNYSIVDNGYNQWEILIPPSKFADGDIEIRWSKALESVRKDVECFFGILKGRFRILKL 231
Y +++Y LY +DG+ F+ KG Y +VDNGY++W LIPPSK ++ +SK LES RKDVEC+FGILKGRFRI KL
Sbjct: 229 YTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKL 305
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.080e-19 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 1 YAQKEYTLYDEDGEPFQRKGNYSIVDNGYNQWEILIPPSKFADGDIEIRWSKALESVRKDVECFFGILKGRFRILKL 231
Y +++Y LY +DG+ F+ KG Y +VDNGY++W LIPPSK ++ +SK LES RKDVEC+FGILKGRFRI KL
Sbjct: 320 YTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKL 396
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 1.090e-19 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 1 YAQKEYTLYDEDGEPFQRKGNYSIVDNGYNQWEILIPPSKFADGDIEIRWSKALESVRKDVECFFGILKGRFRILKL 231
Y +K + +Y++DG KG Y +VDNGY++W+ILI PSK+ + ++ +SK LESVRKDVECFFGILKGR RIL L
Sbjct: 106 YTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILML 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig158.127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig158.127.1 >prot_P-littoralis_Contig158.127.1 ID=prot_P-littoralis_Contig158.127.1|Name=mRNA_P-littoralis_Contig158.127.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp MFFTCCTLHNMLHAYDGLDELEPAVEWGGKEGLHNGWDRSPLLDESITGSback to top mRNA from alignment at P-littoralis_Contig158:474658..476197- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig158.127.1 ID=mRNA_P-littoralis_Contig158.127.1|Name=mRNA_P-littoralis_Contig158.127.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1540bp|location=Sequence derived from alignment at P-littoralis_Contig158:474658..476197- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig158:474658..476197- >mRNA_P-littoralis_Contig158.127.1 ID=mRNA_P-littoralis_Contig158.127.1|Name=mRNA_P-littoralis_Contig158.127.1|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig158:474658..476197- (Pylaiella littoralis U1_48)back to top |