mRNA_P-littoralis_Contig1.87.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: D7G946_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G946_ECTSI) HSP 1 Score: 153 bits (387), Expect = 7.560e-43 Identity = 72/90 (80.00%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 58 NFKAVDGMKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKYGLMVRFSNLESIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVVR 327
+F+A++ M+VATRFTHLGQLKGSAGGYM+KGDPIYSLTANK+GL VRFSNLESIED+H G D LDWD A+GEWVHVEIITTFGQSM V
Sbjct: 185 SFQAIEDMQVATRFTHLGQLKGSAGGYMVKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGQSMEVN 274
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: A0A6H5JBB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB3_9PHAE) HSP 1 Score: 155 bits (391), Expect = 9.310e-42 Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 1
Query: 58 NFKAVDGMKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKYGLMVRFSNLESIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVVRQISL 339
+FK ++ MKVATR+THLGQLKGSAGGYMIKGDPIYSLTANK+GL VRFSNLE+IED+H G D LDWD +GEWVHVEIITTFG+SMVVR+ L
Sbjct: 126 SFKLIEDMKVATRYTHLGQLKGSAGGYMIKGDPIYSLTANKHGLHVRFSNLETIEDYHDGLDMPLDWDAVTGEWVHVEIITTFGKSMVVRRDGL 219
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: A0A6H5JXY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY2_9PHAE) HSP 1 Score: 153 bits (386), Expect = 2.900e-41 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 58 NFKAVDGMKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKYGLMVRFSNLESIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVVR 327
+FK ++ MKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANK+GL VRFSNLE+IED+H G D LDWD +GEWVHVEIITTFG+SMVV
Sbjct: 52 SFKPIEDMKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKHGLHVRFSNLETIEDYHDGLDMPLDWDAVTGEWVHVEIITTFGKSMVVN 141
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: A0A6H5KQZ0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ0_9PHAE) HSP 1 Score: 154 bits (388), Expect = 3.440e-41 Identity = 73/90 (81.11%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 58 NFKAVDGMKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKYGLMVRFSNLESIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVVR 327
+F+A++ M+VATRFTHLGQLKGSAGGYMIKGDPIYSLTANK+GL VRFSNLESIED+H G D LDWD A+GEWVHVEIITTFGQSM V
Sbjct: 228 SFQAIEDMQVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGQSMEVN 317
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: D7FI96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI96_ECTSI) HSP 1 Score: 129 bits (323), Expect = 2.220e-36 Identity = 67/107 (62.62%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 1 HSQTIRLTGIAFSDRTLWRNFKAVDGMKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKYGLMVRFSNLESIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMV 321
H +T R TGIAFS WR K G + L + + GGYM+KGDPIYSLTANK+GL VRFSNLESIED+H G D LDWD A+GEWVHVEIITTFG+SMV
Sbjct: 2 HWKTTRYTGIAFSGLNPWR--KCFRGGVTSRPALELPKSTRAPGGYMVKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGKSMV 106
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: A0A6H5KAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW5_9PHAE) HSP 1 Score: 120 bits (302), Expect = 4.650e-30 Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 58 NFKAVDGMKVATRFTHLGQLKGSAG-----GYMIKGDPIYSLTANKYGLMVRFSNLESIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVVR 327
+F+A +GM+V++++THLGQLKG+ G G MIK DPIY LTANK GLMVRFSN E ++FH G +HL+W D++G+WVHV+I+TTFG+ MVVR
Sbjct: 99 SFRAEEGMRVSSKYTHLGQLKGTIGKGKVKGTMIKLDPIYCLTANKDGLMVRFSNREMPDNFHEGLSKHLNWKDSTGQWVHVKIVTTFGEFMVVR 193
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: D8LDH2_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH2_ECTSI) HSP 1 Score: 110 bits (274), Expect = 8.370e-26 Identity = 51/63 (80.95%), Postives = 55/63 (87.30%), Query Frame = 1
Query: 139 MIKGDPIYSLTANKYGLMVRFSNLESIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVVR 327
M+KGDPIYSLTANK+GL VRFSNLESIED+H G D LDWD A+GEWVHVEIITTFGQSM V
Sbjct: 1 MVKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGQSMEVN 63
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: D8LDH3_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH3_ECTSI) HSP 1 Score: 102 bits (254), Expect = 2.610e-23 Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 58 NFKAVDGMKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKYGLMVRFSNLESIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVV 324
+F+A DGMKV+ T +GQ+KG +GG+ +KG+P++S+TAN G+ VRF+N ES D G D L W+DA+GEWVHVEI TTFG+SM V
Sbjct: 129 SFRAKDGMKVSGSSTRIGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEES--DKVEGMDDTLSWEDATGEWVHVEIRTTFGKSMEV 215
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: D8LDJ9_ECTSI (Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ9_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 1.990e-21 Identity = 48/92 (52.17%), Postives = 68/92 (73.91%), Query Frame = 1
Query: 58 NFKAVDGMKVATRFTHLGQLKGSA-GGYMIKGDPIYSLTANKYGLMVRFSNLE-SIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVVR 327
+F+AV+GMK+ RFTH+GQ+KG+ GG + GDPI S++AN GL VRFSN++ +I D++ + +W DA+GEWVHV I T FG+SM V+
Sbjct: 131 SFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWKDATGEWVHVTIDTVFGESMEVK 222
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Match: A0A6H5K5S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5S3_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 4.120e-21 Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = 1
Query: 58 NFKAVDGMKVATRFTHLGQLKGSA-GGYMIKGDPIYSLTANKYGLMVRFSNLE-SIEDFHPGFDQHLDWDDASGEWVHVEIITTFGQSMVVR 327
+F+AV+GMK+ RFTH+GQ+KG+ GG + GDPI S++AN GL VRFSN++ +I D++ + +W+DA+GEWVHV I T FG+ M V
Sbjct: 168 SFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWEDATGEWVHVTIDTVFGEFMEVE 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.87.1 >prot_P-littoralis_Contig1.87.1 ID=prot_P-littoralis_Contig1.87.1|Name=mRNA_P-littoralis_Contig1.87.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp HSQTIRLTGIAFSDRTLWRNFKAVDGMKVATRFTHLGQLKGSAGGYMIKGback to top mRNA from alignment at P-littoralis_Contig1:544233..545294+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.87.1 ID=mRNA_P-littoralis_Contig1.87.1|Name=mRNA_P-littoralis_Contig1.87.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1062bp|location=Sequence derived from alignment at P-littoralis_Contig1:544233..545294+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:544233..545294+ >mRNA_P-littoralis_Contig1.87.1 ID=mRNA_P-littoralis_Contig1.87.1|Name=mRNA_P-littoralis_Contig1.87.1|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig1:544233..545294+ (Pylaiella littoralis U1_48)back to top |