mRNA_P-littoralis_Contig1574.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 6.740e-153 Identity = 204/263 (77.57%), Postives = 232/263 (88.21%), Query Frame = 1
Query: 4 QGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWE 792
+GN F DIYHMSFIS+ TA ATFH F R+FAREMY EHI+LPTGDYQ KVM++Y+RLGF+GA GSTDVTH+ WG CPYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG Q KGCYLLVDNGYHKW TL+ P+KY I++ D FS RLES RKDVEC+FGIVKGRFRI KL+IPYHK+EDIDNVFFTCCILHNMLHSYDNK EM EEPNWAG+AGLHNAWE
Sbjct: 168 RGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWE 430
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 1.350e-144 Identity = 192/261 (73.56%), Postives = 225/261 (86.21%), Query Frame = 1
Query: 4 QGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNA 786
+GNVF DIYHMSFIS T +TFH FC++FA E+Y E++YLPTG+ KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY DG +EKGCYLLVDNGYHKW TL+ P+K I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNMLHS+DN+G+M EEPNWAGSAGLHNA
Sbjct: 93 RGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA 353
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 2.800e-143 Identity = 192/261 (73.56%), Postives = 225/261 (86.21%), Query Frame = 1
Query: 4 QGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNA 786
+GNVF DIYHMSFIS T +TFH FC++FA E+Y E++YLPTG+ KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY DG +EKGCYLLVDNGYHKW TL+ P+K I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNMLHS+DN+G+M EEPNWAGSAGLHNA
Sbjct: 184 RGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA 444
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 342 bits (877), Expect = 2.840e-113 Identity = 161/263 (61.22%), Postives = 198/263 (75.29%), Query Frame = 1
Query: 1 GQGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHN 783
G+GNVF IY++S++S PT Q FH FC HFA EMY EHI+LP+ + +VM +YE+LGF GA+GSTDVTH+ W CPYNQ RS+TGKEG PT+ YQVTV+H R LAVT GFTG+TNDKTII D+AV RIRTD Y E+ + ++ DG T KGCYL+VDNGYHKW L+ P+KY + + D +FS RLES RKDVEC+FGI+K RFRI KLA+ Y K+E +D VFFTCCILHNMLH++D G + E+ NW GSA L N
Sbjct: 136 GRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 339 bits (869), Expect = 5.860e-113 Identity = 159/262 (60.69%), Postives = 197/262 (75.19%), Query Frame = 1
Query: 1 GQGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPT---GDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGL 777
G+GN F IY +S++S T Q FH FC+HFAREMY EHIYLP+ G+ VM +Y+RLGF+GA+GS DVTH+ W CPYN ARS+TGKEG PT+ YQVTV+H RA+AVT GFT +TNDKT + +D V +IRTD YTE+T+++Y+ DG T KGCYLLVDNGYHKW LM PTKY + + D +FS RLES RKDVEC+FGI+KG FRI K+A+ YH++E IDNVFFTCCILHNMLH++D ++ E W SAG
Sbjct: 107 GRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELD-HVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGA 367
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 335 bits (860), Expect = 6.230e-111 Identity = 166/289 (57.44%), Postives = 201/289 (69.55%), Query Frame = 1
Query: 1 GQGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYT----------------------------ERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGL 777
G+GN F IY MS++S T Q FH FCRHFAREMY E I+LPT + VM +Y+RLGFTGA+GS DVTH+AW CPYNQARS+TGKEG+PTIAYQVTVDH RA+AVT GFTG+TNDKTI+ +D AV +I TD YT E+T+++Y+ DG T KGCYLLVDNGYHKW L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y +E IDNVFFTC ILHNMLH++D ++ E NW SAG+
Sbjct: 94 GRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 325 bits (834), Expect = 8.070e-110 Identity = 148/188 (78.72%), Postives = 167/188 (88.83%), Query Frame = 1
Query: 229 CPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWE 792
CPYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG Q KGCYLLVDNGYHKW TL+ P+KY I++ D FS RLES RKDVEC+FGIVKG FRI KL+IPYHK+EDIDNVFFTCCILHNMLHSYDNK EM EEPNWAG+AGLHNAWE
Sbjct: 2 CPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWE 189
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 330 bits (846), Expect = 8.780e-110 Identity = 159/264 (60.23%), Postives = 188/264 (71.21%), Query Frame = 1
Query: 1 GQGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWE 792
G+GN F D+ +S +S AQ TFH FCRHFA EM+ EHIYLPTG Y +VM + +LG+TGA GSTDVTH+ W CP+ RSFTGKEG+PTIAY VTVDH R LAVT GFTGATNDKTIIR+D V +IRT YTER Y L A+G R +GC+L+VDNGYH+W TL+AP+KY DT FS LES RKDV C FRI KL +PYHK+E +DN+FFTCCILHNMLH++D E +W GSAG H+AWE
Sbjct: 45 GKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC--------FRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWE 300
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 308 bits (790), Expect = 7.330e-102 Identity = 151/261 (57.85%), Postives = 185/261 (70.88%), Query Frame = 1
Query: 1 GQGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGL 777
G+GN F I+ MS++S T Q FH FCR FAREMY EHI+LP + VM +Y+RLG CPYNQARS+TGK+ +PTIAYQVTVDH RA+AVT GFTG+TNDKTI+ +D AV +IRTD YTE+T++LY+ DG T KGCY L DNGYHKW L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y +E IDNVFFTCCILHNMLH++D ++ E NW SAG+
Sbjct: 29 GKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV 272
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 303 bits (777), Expect = 2.020e-100 Identity = 141/227 (62.11%), Postives = 176/227 (77.53%), Query Frame = 1
Query: 103 MYHEHIYLPTGDYQTK--VMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGL 777
MY EHI+LPT + V+ +Y+RLGFTGA+GS DVTH+AW CPYNQARS+TGKEG+PTI YQVTVDH RA+AVT GFTG+TNDKT + +D AV +IRTD YTE+T+++Y+ DG T KGCY+LVDNGYHKW L+ P+KY + + D +FS RLES RKDVEC+FGI+KGR RI LA+ + +E IDNVFFTCCILHNMLH++D ++ E NW SAG+
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV 227 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1574.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1574.4.1 >prot_P-littoralis_Contig1574.4.1 ID=prot_P-littoralis_Contig1574.4.1|Name=mRNA_P-littoralis_Contig1574.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=264bp GQGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKback to top mRNA from alignment at P-littoralis_Contig1574:7717..9092- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1574.4.1 ID=mRNA_P-littoralis_Contig1574.4.1|Name=mRNA_P-littoralis_Contig1574.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1376bp|location=Sequence derived from alignment at P-littoralis_Contig1574:7717..9092- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1574:7717..9092- >mRNA_P-littoralis_Contig1574.4.1 ID=mRNA_P-littoralis_Contig1574.4.1|Name=mRNA_P-littoralis_Contig1574.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=792bp|location=Sequence derived from alignment at P-littoralis_Contig1574:7717..9092- (Pylaiella littoralis U1_48)back to top |