prot_P-littoralis_Contig1567.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1567.1.1
Unique Nameprot_P-littoralis_Contig1567.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
BLAST of mRNA_P-littoralis_Contig1567.1.1 vs. uniprot
Match: A0A6H5JPK1_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK1_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 9.750e-24
Identity = 49/72 (68.06%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 MLGWILDTSTMTISVPPTKLTQLCDMLAEWPVTRRKASIKDVRSLLRKLLHLCHVVRPGKFFIRRILNQLGL 72
            MLGW++DT  +TISV   K+ ++  MLAEWPV RR A++ +VRSLL KLLHLC VVRPGKFF+RRILNQLGL
Sbjct:  697 MLGWVIDTVALTISVSQEKVAKMRAMLAEWPVERRVATVTEVRSLLGKLLHLCEVVRPGKFFVRRILNQLGL 768          
BLAST of mRNA_P-littoralis_Contig1567.1.1 vs. uniprot
Match: V4B2J2_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B2J2_LOTGI)

HSP 1 Score: 60.8 bits (146), Expect = 3.430e-9
Identity = 30/81 (37.04%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    7 DTSTMTISVPPTKLTQLCDMLAEWPVTRRKASIKDVRSLLRKLLHLCHVVRPGKFFIRRILNQLGLGTLALNTPHSDGMHS 87
            DT + T+ V P +++++  ++  W +TR++A++KD++SLL KL  +C+ VRPG+ F+ R+LN L       N  + D  HS
Sbjct:   82 DTQSTTMEVTPERVSEILALVESW-LTRKRATLKDLQSLLGKLHFICNCVRPGRIFVSRLLNWL---PTTFNDKNGDKKHS 158          
BLAST of mRNA_P-littoralis_Contig1567.1.1 vs. uniprot
Match: A0A7M5UJ89_9CNID (Reverse transcriptase domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5UJ89_9CNID)

HSP 1 Score: 53.1 bits (126), Expect = 3.710e-6
Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    2 LGWILDTSTMTISVPPTKLTQLCDMLAEWPVTRRKASIKDVRSLLRKLLHLCHVVRPGKFFIRRILN 68
            LG  +D+ T TI +P  KL  L D++  W + +RK   +D+ SL+  L   C V++PG+ F+RR+++
Sbjct:  314 LGIEIDSVTFTIRLPANKLASLRDLVGSW-IDKRKCVKRDLLSLIGSLSFACKVIKPGRIFLRRLID 379          
BLAST of mRNA_P-littoralis_Contig1567.1.1 vs. uniprot
Match: A0A7M5VD07_9CNID (Reverse transcriptase domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5VD07_9CNID)

HSP 1 Score: 51.6 bits (122), Expect = 1.170e-5
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    2 LGWILDTSTMTISVPPTKLTQLCDMLAEWPVTRRKASIKDVRSLLRKLLHLCHVVRPGKFFIRRILN 68
            LG  +D+S   I +P  K ++L + L  W + RRK + K++ S + KL  +C VVRPG+ F+RR+++
Sbjct:   90 LGIEIDSSKQIIRIPNDKYSELMESLPFW-ILRRKCTKKELLSFIGKLSLVCKVVRPGRIFLRRLMD 155          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1567.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JPK1_9PHAE9.750e-2468.06Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
V4B2J2_LOTGI3.430e-937.04Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A7M5UJ89_9CNID3.710e-637.31Reverse transcriptase domain-containing protein n=... [more]
A0A7M5VD07_9CNID1.170e-538.81Reverse transcriptase domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1567contigP-littoralis_Contig1567:5368..5628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1567.1.1mRNA_P-littoralis_Contig1567.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1567 5342..5628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1567.1.1 ID=prot_P-littoralis_Contig1567.1.1|Name=mRNA_P-littoralis_Contig1567.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MLGWILDTSTMTISVPPTKLTQLCDMLAEWPVTRRKASIKDVRSLLRKLL
HLCHVVRPGKFFIRRILNQLGLGTLALNTPHSDGMHS
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