mRNA_P-littoralis_Contig156.24.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: A0A6H5JE48_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE48_9PHAE) HSP 1 Score: 134 bits (337), Expect = 6.700e-36 Identity = 67/81 (82.72%), Postives = 75/81 (92.59%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI 244
QTPVQ EM VETTLEKRGAKDARISTG KEK+RFTLCLAVMA+G +VPLRIIFKG PFIPP+ +G+GK+TQPRKGSIAAE+
Sbjct: 170 QTPVQQEMLVETTLEKRGAKDARISTGGKEKDRFTLCLAVMADGGKVPLRIIFKGKPFIPPSTAGRGKNTQPRKGSIAAEV 250
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: A0A6H5JB72_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB72_9PHAE) HSP 1 Score: 134 bits (336), Expect = 3.340e-35 Identity = 66/80 (82.50%), Postives = 75/80 (93.75%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAE 241
QTPVQ EMPVETTLEKRGAKDARISTG KEK+RFTLCLAVMA+G +VPL+IIFKG PFIPP+ +G+G++TQPRKGSIAAE
Sbjct: 217 QTPVQQEMPVETTLEKRGAKDARISTGGKEKDRFTLCLAVMADGGKVPLQIIFKGKPFIPPSTAGRGRNTQPRKGSIAAE 296
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 133 bits (335), Expect = 8.670e-35 Identity = 67/81 (82.72%), Postives = 74/81 (91.36%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI 244
QTPVQ EMPVETTLEK GAKDARISTG KEKERFTLCLAVMA+G +VPLRIIFKG PFIPP+ + +GK+TQPRKGSIAAE+
Sbjct: 295 QTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEV 375
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 131 bits (330), Expect = 7.750e-34 Identity = 65/81 (80.25%), Postives = 71/81 (87.65%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI 244
QTPVQHEMPVETTLE GAKDARI+TG KEKERFTLCLAV A+G +VPLRIIFKGTPF+PP GKGK+TQPRK SIA E+
Sbjct: 276 QTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEV 356
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: A0A6H5JFD9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD9_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.610e-33 Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIA 235
QTPVQHEMPVETTLEK GAKDARISTG KEKERFTL LAVMA+G +V RIIFKGTPFIPPT SGKGKST PRK S+A
Sbjct: 289 QTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRKNSVA 366
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.990e-33 Identity = 67/81 (82.72%), Postives = 70/81 (86.42%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI 244
QTPVQHEMPVETTLEK GAKDARISTG KEKERFTL LAVMA+G +V RIIFKGTPFIPP SGKGKST PRK S+A EI
Sbjct: 122 QTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEI 202
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: D7G5E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E8_ECTSI) HSP 1 Score: 123 bits (309), Expect = 2.100e-33 Identity = 63/81 (77.78%), Postives = 69/81 (85.19%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI 244
QTPVQHEM VET LEK GAKDARI+TG KEKERFTLCLAV +G +VPLRIIFKGTPFIPP + GKGK+TQP K SIA E+
Sbjct: 60 QTPVQHEMLVETALEKTGAKDARIATGGKEKERFTLCLAVTGDGKKVPLRIIFKGTPFIPPDRPGKGKATQPWKNSIAWEM 140
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 123 bits (308), Expect = 5.450e-33 Identity = 62/81 (76.54%), Postives = 69/81 (85.19%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI 244
QTPVQHEMPVET+LEK GAKDARI+TG KEKERFTLCLAV + +VPLR IFKGTP IPP + GKGK+TQPRK SIA E+
Sbjct: 60 QTPVQHEMPVETSLEKTGAKDARIATGGKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEM 140
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.400e-32 Identity = 66/81 (81.48%), Postives = 70/81 (86.42%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI 244
QTPVQHE+PVETTLEK GAKDARISTG KEKERFTL LAVMA+G +V RIIFKGTPF PPT SGKGKST PRK S+A EI
Sbjct: 122 QTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEI 202
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.680e-32 Identity = 64/81 (79.01%), Postives = 68/81 (83.95%), Query Frame = 2
Query: 2 QTPVQHEMPVETTLEKRGAKDARISTGSKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI 244
QTPVQHEMPVETTLEK GAKDARISTG KE+ERF L LAVMA+G +V RI FKGTPF PPT SGKGKST PRK S+A EI
Sbjct: 3 QTPVQHEMPVETTLEKTGAKDARISTGGKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEI 83 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig156.24.1 >prot_P-littoralis_Contig156.24.1 ID=prot_P-littoralis_Contig156.24.1|Name=mRNA_P-littoralis_Contig156.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=82bp PDACPARDAGRNDSGKAWRQGCSHQHRKQGEGTLHALSCCHGERQQGSTTback to top mRNA from alignment at P-littoralis_Contig156:110159..110625+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig156.24.1 ID=mRNA_P-littoralis_Contig156.24.1|Name=mRNA_P-littoralis_Contig156.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=467bp|location=Sequence derived from alignment at P-littoralis_Contig156:110159..110625+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig156:110159..110625+ >mRNA_P-littoralis_Contig156.24.1 ID=mRNA_P-littoralis_Contig156.24.1|Name=mRNA_P-littoralis_Contig156.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=246bp|location=Sequence derived from alignment at P-littoralis_Contig156:110159..110625+ (Pylaiella littoralis U1_48)back to top |