prot_P-littoralis_Contig1557.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig1557.1.1
Unique Name	prot_P-littoralis_Contig1557.1.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	180

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 9.290e-103
Identity = 152/180 (84.44%), Postives = 165/180 (91.67%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLGMTGYLRQFVPLYSITAAP 180
            MQ IFDGLKGK+YFTQLDLASGFHQ+EIAE DR+ TAFRDADGMLWEFTRAGFGLTVLPAAF+RRVKSALGH+ GVFSWLD ILIAS +WEEHLAT+TLV NRLLAAGLSVNFAKC FGAASQ+FLGM++DSTG+ PAPSKL AIA M RP  VEELRTFLG+TGYLRQFVP YS+TAAP
Sbjct:   89 MQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLAGVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCPFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAP 268

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 1.240e-101
Identity = 152/180 (84.44%), Postives = 165/180 (91.67%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLGMTGYLRQFVPLYSITAAP 180
            MQ IFD LKGK+YFTQLDLASGFHQ+EIAE DR+ TAFRDADGMLWEFTRAGFGLTVLPAAF+RRVKSALGH+ GVFSWLD ILIAS +WEEHLAT+TLV NRLLAAGLSVNFAKCIFGAASQ+FLGM++DSTG+ PAPSKL AIA M RP  VEELRTFLG+TGYLRQFVP YS+TAAP
Sbjct:   45 MQTIFDTLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLAGVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAP 224

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 2.560e-101
Identity = 153/180 (85.00%), Postives = 166/180 (92.22%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLGMTGYLRQFVPLYSITAAP 180
            MQ IFDGLKGK+YFTQLDLASGFHQ+EIAE DR+ TAFRDADGMLWEFTRAGFGLTVLPAAF+RRVKSALGH+ GVFSWLD ILIAS +WEEHLAT+TLV NRLLAAGLSVNFAKCIFGAASQ+FLGM++DSTG+ PAPSKL AIA M RP  VEELRTFLG+TGYLRQFVP YS+TAAP
Sbjct:  229 MQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLAGVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAP 408

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 1.860e-98
Identity = 153/180 (85.00%), Postives = 166/180 (92.22%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLGMTGYLRQFVPLYSITAAP 180
            MQ IFDGLKGK+YFTQLDLASGFHQ+EIAE DR+ TAFRDADGMLWEFTRAGFGLTVLPAAF+RRVKSALGH+ GVFSWLD ILIAS +WEEHLAT+TLV NRLLAAGLSVNFAKCIFGAASQ+FLGM++DSTG+ PAPSKL AIA M RP  VEELRTFLG+TGYLRQFVP YS+TAAP
Sbjct:  231 MQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLAGVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAP 410

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 3.570e-96
Identity = 153/180 (85.00%), Postives = 166/180 (92.22%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLGMTGYLRQFVPLYSITAAP 180
            MQ IFDGLKGK+YFTQLDLASGFHQ+EIAE DR+ TAFRDADGMLWEFTRAGFGLTVLPAAF+RRVKSALGH+ GVFSWLD ILIAS +WEEHLAT+TLV NRLLAAGLSVNFAKCIFGAASQ+FLGM++DSTG+ PAPSKL AIA M RP  VEELRTFLG+TGYLRQFVP YS+TAAP
Sbjct:  753 MQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLAGVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAP 932

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5KAQ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ6_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 2.010e-95
Identity = 140/180 (77.78%), Postives = 160/180 (88.89%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLGMTGYLRQFVPLYSITAAP 180
            MQ IFDGLKGKRYFTQ+DLASGFHQIEIAE DR+ TAFRDADGML+EFTRA FGLTVLP+AF+RRVKSALG +DGVFSWLD IL+A+ TWEEHLA + LV  RL AAGLSVNF KCIFGA+SQ+FLG+++D+TG+ PAPSKL AIA+M RP  VE+LRTFLG+TGYLRQFVP YS+ AAP
Sbjct:  249 MQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAAFGLTVLPSAFTRRVKSALGIVDGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPKCIFGASSQEFLGIIIDATGMHPAPSKLEAIANMPRPQTVEDLRTFLGLTGYLRQFVPQYSLVAAP 428

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5KGF2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF2_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 1.840e-85
Identity = 136/180 (75.56%), Postives = 151/180 (83.89%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLGMTGYLRQFVPLYSITAAP 180
            MQ IFDGLKGK+YFTQ+DLASGFHQ+EIAE DR+ TAFRDADGMLWEFTRAGFGLTVLPAAF+RRVKSALGH+ GVFSWLD ILIAS +W+EHLAT+TLV NRLLAAGLS             +FLGM++DSTG+ PAPSKL AIA M RP  VEELRTFLG+TGY RQ VP YS+TAAP
Sbjct:  154 MQTIFDGLKGKKYFTQVDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLAGVFSWLDDILIASDSWQEHLATLTLVLNRLLAAGLS-------------EFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYFRQVVPNYSLTAAP 320

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5K5Z9_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z9_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 2.140e-81
Identity = 127/180 (70.56%), Postives = 143/180 (79.44%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLGMTGYLRQFVPLYSITAAP 180
            MQ IFDGLK  +YFTQL+LASGFH +EIAE DR  TAFRD DGML+EFTRAGFGLT LPAAF+RRVKSALGH+ GVFSWLD ILIAS TWEEHLAT+TLV NRL+AAGLS             +FLGM++DSTG+ PAPSKL AI  M RP  V+EL TFLG+TGYLRQ +P  S+TAAP
Sbjct:    1 MQTIFDGLKSNKYFTQLNLASGFHHMEIAEKDRCRTAFRDVDGMLFEFTRAGFGLTALPAAFTRRVKSALGHLLGVFSWLDDILIASDTWEEHLATLTLVLNRLVAAGLS-------------EFLGMIIDSTGLYPAPSKLDAITRMPRPHTVQELHTFLGLTGYLRQLIPNCSLTAAP 167

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5L7I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7I8_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 2.940e-80
Identity = 132/182 (72.53%), Postives = 147/182 (80.77%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKL-RAIADMARPTNVEELRTFLGMTGYL-RQFVPLYSITAAP 180
            MQ IFDGLKGK+YFTQLDLASGF Q+EIAE DR+ TAFRDADGMLWEFTRAGFGLTVL AAF+RRVKSA GH+ GVFSWLD I+IAS TWEEH+AT+TLV NRLLAAGL V+FAKCIFGAASQ+FLGM++D TG+ PAPSKL R     A PT+        G    L RQFVP YS+ AAP
Sbjct:  250 MQTIFDGLKGKKYFTQLDLASGFRQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLAAAFTRRVKSAWGHLSGVFSWLDDIVIASDTWEEHVATLTLVLNRLLAAGLFVSFAKCIFGAASQEFLGMIIDCTGLYPAPSKLARCNRKHASPTHRRRAAHVFGPHRLLARQFVPHYSLAAAP 431

[Close]

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 2.700e-78
Identity = 128/170 (75.29%), Postives = 147/170 (86.47%), Query Frame = 0

Query:    1 MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTRAGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLVFNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMARPTNVEELRTFLG--MTGYLR 168
            MQ IFDGLKGKRYFTQ+DLASGFHQIEIAE DR+ TAFRDADGML+EFTRAGFGLTVLP+AF+RRVKSALG +DGVFSWLD IL+A+ TWEEHLA + LV  RL AAGLSVNF KCIFGA+SQ+FLGM++D+TG+ PAPSKL AIA+M RP  VE+LRT +   +T  LR
Sbjct:  391 MQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALGIVDGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPKCIFGASSQEFLGMIIDATGMHPAPSKLEAIANMPRPQTVEDLRTLVAAPLTDILR 560

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1557.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KIS6_9PHAE	9.290e-103	84.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K9Z4_9PHAE	1.240e-101	84.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQV6_9PHAE	2.560e-101	85.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFK7_9PHAE	1.860e-98	85.00	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KEH2_9PHAE	3.570e-96	85.00	RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp....	[more]
A0A6H5KAQ6_9PHAE	2.010e-95	77.78	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KGF2_9PHAE	1.840e-85	75.56	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K5Z9_9PHAE	2.140e-81	70.56	RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5L7I8_9PHAE	2.940e-80	72.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KBF4_9PHAE	2.700e-78	75.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 8..128 e-value: 5.6E-9 score: 35.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..135 e-value: 1.1E-24 score: 88.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 140..180 e-value: 2.8E-10 score: 42.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 7..177
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 7..177
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..127 e-value: 1.69297E-40 score: 133.104
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..180

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1557	contig	P-littoralis_Contig1557:2764..3303 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1557.1.1	mRNA_P-littoralis_Contig1557.1.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig1557 2764..3972 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig1557.1.1 ID=prot_P-littoralis_Contig1557.1.1|Name=mRNA_P-littoralis_Contig1557.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=180bp
MQPIFDGLKGKRYFTQLDLASGFHQIEIAESDRFNTAFRDADGMLWEFTR
AGFGLTVLPAAFSRRVKSALGHIDGVFSWLDGILIASSTWEEHLATITLV
FNRLLAAGLSVNFAKCIFGAASQDFLGMVMDSTGICPAPSKLRAIADMAR
PTNVEELRTFLGMTGYLRQFVPLYSITAAP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom
IPR043128	Rev_trsase/Diguanyl_cyclase
IPR043502	DNA/RNA_pol_sf