mRNA_P-littoralis_Contig155.95.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig155.95.1
Unique Name	mRNA_P-littoralis_Contig155.95.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 2.610e-155
Identity = 247/330 (74.85%), Postives = 264/330 (80.00%), Query Frame = 1

Query:    1 MGGVFEEEG----AEREGXXXXXXXXXXXXXXXXXXATVLDGVLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGSDPQNPRYVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            M GVFEEEG    AE EG    XXXX          ATVLD VLWKLG DKFHRDFRN +LLGLVQDRFPKSKLAYL VKVML+NS+PTERKV+E VSASISAR LFDKLC+ W+T NLTKNK VPDWR FVSWM+ALCTDLTSMVSKIPGSD QNPRYVVNMAKMVQY+R +LVKCTARDRYGKETARI+EILLQNK+LDQQQVGEMAMIPPSDARERLY+L++DRMVSVQEVPKRAD NP+TTFYLWTIKHDQVAQVVL++LYKAMLNMRLRRKFVY NDK LFIHDA                               ENLMFFNTF
Sbjct:    1 MDGVFEEEGEGGHAEEEGVLGGXXXXIGAG------ATVLDSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASISARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLMFFNTF 324

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A0W8C9C8_PHYNI (DNA-directed RNA polymerase III subunit RPC3 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9C8_PHYNI)

HSP 1 Score: 188 bits (477), Expect = 1.830e-47
Identity = 104/300 (34.67%), Postives = 176/300 (58.67%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ G  +  RD R+ + +    +    + +A + V  ML++SAP ER+ +EP SA +SAR LF+        +   KN   P+    WRL ++++  +C D + MV K+     DP   R      YVV+M K+V++++ +      +D+YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L  D+++ +QE+PKRADHNP+ TF+ W++   Q+   V + +  ++  +R RRKF    +KEL         +ND +K   D++ RSLDRLD A++ LD  LM +  F
Sbjct:  382 LVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVTAMLQHSAPREREKDEPTSAPVSARDLFN--------MESVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPIQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 669

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP)

HSP 1 Score: 184 bits (468), Expect = 1.160e-46
Identity = 101/300 (33.67%), Postives = 174/300 (58.00%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ G  +  RD R+ + +    +    + +A + V  ML++S+P ER+ +EP S  +SAR LFD        +   K    P+    WRL ++++  +C D + MV K+     DP   R      YVV+M K+V++++ +      +D+YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L  D+++ +QE+PKRADHNP+ TF+ W++   Q+   + + +  ++  +R RRKF    +KEL         +ND +K   D++ RSLDRLD A++ LD  LM +  F
Sbjct:  313 LVWRFGVTQLLRDLRHKACIRFATENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSARDLFD--------MESVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 600

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: H3GD40_PHYRM (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD40_PHYRM)

HSP 1 Score: 184 bits (467), Expect = 1.770e-46
Identity = 99/296 (33.45%), Postives = 176/296 (59.46%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ G  +  RD R+ + +    +    + +A + V+ ML++S+P ER+ +EP S  +SAR LF+ +    + +    N     WRL ++++  +C D + MV K+     DP   R      YVV+M K+V++++ +  +   +D+YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L  D+++ +QE+PKRADHNP+ TF+ W++   Q+   + + +  ++  +R RRKF    +KEL         +ND +K   D++ RSLDRLD A++ LD  LM +  F
Sbjct:  320 LVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVEAMLQHSSPREREKDEPTSFPVSARDLFE-MESVKKALPSEANNP---WRLLLNYIMVMCRDKSGMVMKVSQEAFDPTQARSGDGGQYVVHMQKIVEFLQQATTRAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQTRIAERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 607

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A3R7FY14_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY14_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.550e-45
Identity = 99/296 (33.45%), Postives = 171/296 (57.77%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ G  +  RD R+ + +    +    + +A + V  ML++SAP ER+ +EP+SA +SAR LF          N   ++    WRL ++++  +C D + MV K+     DP   R      YVV+M K+V++++        +D++G  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L  +++V +QE+PKRADHNP+ TF+ W++    +   + + +  ++  +R RRKF    +KEL          ND +K   D++ RSLDRLD A++ LD  LM +  F
Sbjct:  364 LVWRFGVTQLLRDLRHKACIKFATENI--NAVAGVIVAAMLQHSAPREREKDEPISAPVSARDLFG----MESVKNALPSESNNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPSQARSGDGGQYVVHMQKIVEFLQQVTTHAYIQDKFGAASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYGEKLVKMQEIPKRADHNPAFTFFCWSVDVPHMQTRITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEGNDLDK--FDKLSRSLDRLDRAIIHLDGMLMLYRDF 651

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A0P1AWK6_PLAHL (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK6_PLAHL)

HSP 1 Score: 182 bits (461), Expect = 1.860e-45
Identity = 100/296 (33.78%), Postives = 175/296 (59.12%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ G  +  RD R+ + +    +    + +A + V+ ML++S+P ER+ +E  SA +SAR LF+ +    + +    N     WRL ++++  +C D + M+ K+     DP   R      YVV+M K+V++++ + V    +D+YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L  D++V +QE+PKRADHNP+ TF+ W++   Q+   + + +  ++  +R RRKF    +KEL         + D +K   D++ RSLDRLD A++ LD  LM F  F
Sbjct:  354 LVWRFGMTQMLRDLRHKTCIRFASENI--NAVAGVIVEAMLQHSSPREREKDEATSAPVSARDLFN-MESVKKALPSESNNP---WRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKYGVASARIVRLLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEALDIDK--FDKLSRSLDRLDRAIIHLDGMLMLFRDF 641

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A3M6VEE8_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEE8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 7.520e-45
Identity = 99/300 (33.00%), Postives = 173/300 (57.67%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ G  +  RD R+ + +    +    + +A + V  ML++SAP ER+ +EP S+ +SAR LFD        +   K    P+    WRL ++++  +C D + MV K+     DP   R      YVV+M K+V++++ +      +++YG  +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY+L  D+++ +QE+ KRADHNP+ TF+ W++   Q+   + + +  ++  +R RRKF    +KEL         +ND +K   D++ RSLDRLD  ++ LD  LM +  F
Sbjct:  366 LVWRFGVTQLLRDLRHKACVRFATENI--NAVAGVIVAAMLQHSAPHEREKDEPTSSPVSARDLFD--------MESVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPTQARAGDGGQYVVHMQKIVEFLQQATTHAYVQEKYGVASARIVRLLMEQRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEISKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDK--FDKLSRSLDRLDRGIIHLDGMLMLYRDF 653

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA)

HSP 1 Score: 175 bits (444), Expect = 4.640e-43
Identity = 101/300 (33.67%), Postives = 171/300 (57.00%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ GAD+  RD R+ + +    +    + +A + V  ML++S+P ER+ +E  S  ++AR LF         +   K+    D    WRL ++++  +C D + MV K+     D    R      YVV+M K+V ++R +      +D++G  +ARI+ +L++ + L+QQ +GE+A++P +DAR RLY+L  +R+V +QEVPKRADHNP+ T Y W++   ++ + V + +  ++  +R RRK     +KEL         +ND  K   D++ R+LDRLD A+L+LD  LM +  F
Sbjct:  375 LVWRFGADQLMRDLRHAACVRFATENI--NTVAGVIVAAMLQHSSPHEREKDEATSYPVTARELF--------AVPAVKSALPKDSKDTWRLLLNYITVMCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVRLLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNKELIARSDQLVEANDVAK--FDKLSRALDRLDRAVLQLDAMLMLYRDF 662

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A484E8N6_BRELC (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8N6_BRELC)

HSP 1 Score: 173 bits (438), Expect = 2.440e-42
Identity = 98/301 (32.56%), Postives = 173/301 (57.48%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD-----WRLFVSWMAALCTDLTSMVSKIPGS--DPQNPR------YVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ G  +  R+ R+ + +    +    + +A + V  MLE+S+P ER+ NE  SA +SAR L++           T  K +P      WRL ++++  +C D + M+ K+     D    R      YVV+M K+V++++ +      +DR+G  +ARI+ +L++ + L+Q+ +GE+A++P ++AR RLY+L  D++V +QE+PKRADHNP+ TF+ W++   Q+   + + +  ++  +R RR F    +KEL         ++D +K   D++ RSLDRLD A+++LD  LM F  F
Sbjct:  359 LVWRFGMTQMLRELRHKACIRFATENV--NAVAGVIVTAMLEHSSPRERESNESTSAPVSARDLYNME---------TVKKALPSEANNPWRLLLNYITVMCRDKSGMMMKVAQETFDSTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDRFGVASARIVRLLIEKRQLEQKTIGELALLPSNEARHRLYELYTDKLVKMQEIPKRADHNPAFTFFCWSVDIPQMHVRITERVQGSLCRLRRRRTFEAEENKELIARSEQLVEAHDLDK--FDKLSRSLDRLDRAIIQLDGMLMLFRDF 646

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BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Match: A0A024GFJ4_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GFJ4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.150e-41
Identity = 89/297 (29.97%), Postives = 175/297 (58.92%), Query Frame = 1

Query:  115 VLWKLGADKFHRDFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISARALFDKLCDTWRTINLTKNKKVPD-WRLFVSWMAALCTDLTSMVSKIPGSDPQ--------NPRYVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQVGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHDQVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLDQVRRSLDRLDTALLRLDENLMFFNTF 978
            ++W+ G D+  R+ R+++ +    +    + +A + V  ML  S   ER+ NEP S  ++AR ++ K+ +  + +     K++ D WRL ++++A +  D + M++++                +YVV+M  +  Y++ + +    +D++G ++ARI+ ++L+ + L+Q+ +GE+A++P ++AR RLY L +D+++ +QE+PKR+DHNP  T Y W++    + +V+ + +  ++  +R RR F+   +KEL    +     ND EK   D++ + LDRLD ++L+LDENLM +  F
Sbjct:  360 LVWRCGTDQLLRELRHDAFVRFAMENV--NHVAGVIVSAMLSYSMSHERESNEPTSFPMTAREIY-KVDEVKQALP----KEIKDTWRLLLNYLAVMVRDKSGMLTRVAAEKADATTTQGGDGGQYVVHMKNITDYLKQATMHAYIQDKFGVQSARIVRLILEKRQLEQKSIGELALLPLNEARRRLYDLYRDKLIHLQEIPKRSDHNPVHTMYTWSVNTFHIERVIRERVQDSICKLRSRRDFIAKENKELIARSSQLVEENDLEK--FDKLSQGLDRLDRSILQLDENLMLYRDF 647

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig155.95.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMS6_ECTSI	2.610e-155	74.85	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
A0A0W8C9C8_PHYNI	1.830e-47	34.67	DNA-directed RNA polymerase III subunit RPC3 n=12 ...	[more]
G4Z0C0_PHYSP	1.160e-46	33.67	DNA-directed RNA polymerase III subunit RPC3 (Frag...	[more]
H3GD40_PHYRM	1.770e-46	33.45	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
A0A3R7FY14_9STRA	1.550e-45	33.45	DNA-directed RNA polymerase III subunit RPC3 n=3 T...	[more]
A0A0P1AWK6_PLAHL	1.860e-45	33.78	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
A0A3M6VEE8_9STRA	7.520e-45	33.00	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
A0A5D6XL36_9STRA	4.640e-43	33.67	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
A0A484E8N6_BRELC	2.440e-42	32.56	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
A0A024GFJ4_9STRA	1.150e-41	29.97	DNA-directed RNA polymerase III subunit RPC3 n=2 T...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig155	contig	P-littoralis_Contig155:461876..473125 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FMS6
Preferred name	POLR3C
PFAMs	HTH_9,RNA_pol_Rpc82,TFIIE_alpha
Model size	2043
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC02795
KEGG ko	ko:K03023
KEGG Reaction	R00435,R00441,R00442,R00443
KEGG Pathway	ko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169
KEGG Module	M00181
Hectar predicted targeting category	other localisation
GOs	GO:0000428,GO:0001817,GO:0001819,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006359,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031323,GO:0031326,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051240,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141
Exons	8
Evalue	1.62e-161
EggNOG OGs	KOG2587@1\|root,KOG2587@2759\|Eukaryota
Description	DNA-directed 5'-3' RNA polymerase activity
Cds size	981
COG category	K
BRITE	br01611,ko00000,ko00001,ko00002,ko03021

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig155.95.1	prot_P-littoralis_Contig155.95.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig155 461876..472063 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789742.125386-CDS-P-littoralis_Contig155:461875..462016	1680789742.125386-CDS-P-littoralis_Contig155:461875..462016	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig155 461876..462016 +
1680789742.136084-CDS-P-littoralis_Contig155:462857..463009	1680789742.136084-CDS-P-littoralis_Contig155:462857..463009	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig155 462858..463009 +
1680789742.1451137-CDS-P-littoralis_Contig155:464601..464740	1680789742.1451137-CDS-P-littoralis_Contig155:464601..464740	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig155 464602..464740 +
1680789742.1544263-CDS-P-littoralis_Contig155:465905..466037	1680789742.1544263-CDS-P-littoralis_Contig155:465905..466037	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig155 465906..466037 +
1680789742.16643-CDS-P-littoralis_Contig155:467314..467418	1680789742.16643-CDS-P-littoralis_Contig155:467314..467418	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig155 467315..467418 +
1680789742.1765158-CDS-P-littoralis_Contig155:467982..468067	1680789742.1765158-CDS-P-littoralis_Contig155:467982..468067	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig155 467983..468067 +
1680789742.1855452-CDS-P-littoralis_Contig155:471301..471385	1680789742.1855452-CDS-P-littoralis_Contig155:471301..471385	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig155 471302..471385 +
1680789742.196398-CDS-P-littoralis_Contig155:471919..472063	1680789742.196398-CDS-P-littoralis_Contig155:471919..472063	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig155 471920..472063 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789742.2058933-UTR-P-littoralis_Contig155:472063..473125	1680789742.2058933-UTR-P-littoralis_Contig155:472063..473125	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig155 472064..473125 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig155:461876..473125+
coding sequence from alignment at P-littoralis_Contig155:461876..473125+

protein sequence of mRNA_P-littoralis_Contig155.95.1

>prot_P-littoralis_Contig155.95.1 ID=prot_P-littoralis_Contig155.95.1|Name=mRNA_P-littoralis_Contig155.95.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp
MGGVFEEEGAEREGEGEGGFWPGGGGRGVGAGATVLDGVLWKLGADKFHR
DFRNNSLLGLVQDRFPKSKLAYLAVKVMLENSAPTERKVNEPVSASISAR
ALFDKLCDTWRTINLTKNKKVPDWRLFVSWMAALCTDLTSMVSKIPGSDP
QNPRYVVNMAKMVQYMRSSLVKCTARDRYGKETARIIEILLQNKFLDQQQ
VGEMAMIPPSDARERLYQLLKDRMVSVQEVPKRADHNPSTTFYLWTIKHD
QVAQVVLDTLYKAMLNMRLRRKFVYCNDKELFIHDAAARLSNDAEKERLD
QVRRSLDRLDTALLRLDENLMFFNTF*

mRNA from alignment at P-littoralis_Contig155:461876..473125+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig155.95.1 ID=mRNA_P-littoralis_Contig155.95.1|Name=mRNA_P-littoralis_Contig155.95.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11250bp|location=Sequence derived from alignment at P-littoralis_Contig155:461876..473125+ (Pylaiella littoralis U1_48)
ATGGGCGGCGTTTTTGAGGAGGAAGGCGCGGAGAGGGAGGGGGAGGGGGA
GGGGGGATTTTGGCCGGGGGGCGGTGGGAGGGGGGTGGGGGCGGGGGCTA
CGGTGCTGGATGGCGTGCTGTGGAAGCTCGGAGCTGACAAGGTGTGATTG
CGGTATCGTATCATATGCGGGTGCCGTCGTGTGGTGTCGAATCGCGGGGA
TGTCGGCGGTCAGAAGCTATAATACTGCTGTTTTGCTATCATAGTGCAGG
GGCCAAGAAAAAGGCAGTGTTCTGATGCACTGGAATGATGCCATACAAAA
AAGCCACTGTAGGATATCAACAGGGTGGAAGTGACAGGGTGTGCCTGTGG
TATGCCTTTGCTGTCGTGTCGAATCGCGGGGGATGTCTGCGGTGGGTTGT
ACTTGTGTTGCTGTTACAGGGGCCAAAAAAAATGGCAAAATTTCTGATGT
ACTGTACGAAAGAGCTACTCTATGAAAGGATATCAACAGGGTGGAAGCGA
CAAAGTGTGATTGCGGTACGGTATTGTACGTGTGTGCGGTCGTGTCGAAT
CGCGGGGATGTCTGCGGTCAGAGTTCCACTGCAATGCCATCACAGGGGCA
AAAAAAAGGGCAGGGTTCTGATGTACCATACAAAAAAGCCTACAAACTAC
TTCGAAGTATAGGATATCATCAGGGCGGGAACGAACCCCGAGCGGTGTGT
TTGTATGCGGAGGACGGCATACAACCAACCGGGTCCAGTGTGTGTGCGTG
TGGCATCCGTTTTTTCATTTATTGTATCATAGTGTGCTTGGAAGGCGGAG
AAGAGTCGGCGCTTATCAGAGTGGCGAGGTGGCGGCCCGGCGTGTTTTGA
TGAACAGCCCGGCCCCCTGCTGCCGGTTCCTGATGCCCTGCCCTGCCCTT
CCCTGTCCTACCCTACCCTACCCCCCTTTCGTGGAATCGCGCTTTTGCGG
GGCCCCCCTCCTTTCCTGACCCGTCAAAACAGTTCCACCGAGATTTCCGC
AACAACTCCCTGCTGGGGTTGGTTCAGGACAGGTTTCCCAAAAGCAAGCT
GGCGTATCTGGCGGTGAAGGTGATGCTGGAGAACTCCGCCCCTACGGAGA
GGAAGGTCAACGAGCCAGTGTCGGCCTCCATCAGGTGTGGAAACCTATTT
TTTTTTGAAACTTTGAAATTTTCTTCGTTAACGAAGGAATTAAAAAAAAA
AAAGTTCCGCGGTCCTCTAAGCTATAGCTAGAAAGGAAGTTACACCAGGA
AGAGTGAGATTTCCGTCGTCGAACTCAGGATTCCAGCAGGCCGGAAGTTT
CCAGTAAGTTTCCTGCAATTCCGCCGTGCGGTATGGTATGGTATACGACA
CAAGGAAAGAACACACCTCGGTGGTAACATTTTGGCTCTTGCTTCGTACG
TACACTGGGCGGGTGTGTTTTTTGTTTGTGTTTTTTTGTGTTGTGTGTGT
GTAAGGGGGGCTGTTATCTGGGTGTTATTTTTCTTGGGGGGTGTGGTGTC
CTACGTCTTTCCTTTCTACTTCATCTGAGGTACACAAGTTTTTATGCTTT
GGGCTCATGTTGACCCGTGAATCGATCATCACCGGTTGTAATTTTGTGAG
CTGGCGGGGGGGGTGTTGTCTTGTGTGATACAAGGTACCCCGTGCAGCTG
TGCCGCCTCCCATCGTCTTTGTGCCTCTTGCGCGCGCAAAGCGATGGGAT
GGTCGTGGTGTCTGTCACCCGTGCATTTATTCTGCAGAATATTCTTCTGG
TCATCTTGCTGAGACGGTCAGGTCGCTCCATCCCGCATCCTGAAAACAGC
ATGCCTCTCTACCTCCTTGCTACTGTCTGTACGAATTCCATACCGAAAGG
TGTAGACTGGTGCTCAGAATAAATGGGATGACAACACACAGCAGACACAC
ACTGTACGACAAACCTAGGGATTGTTGAACCCGACTCGCATTCAAAACCA
AAGGCTATTGCTTCGGGAGGAAGGGTGTGGGCGATGAGACAAAATAGAGT
AAAAAGCTCGTGCGTGACCTTTCTTCTGTGTAACCCCGGCTGGTGCACCC
TCTTCATCAGTCCGAAAGGTGTAGACCGCTGCCCAGAATAAAATTGGACG
AAAAAACACACACAGCAGTGTTTACATACCCTCGCCTTTCCACTTGGATA
ATCATCCTATCCTGAAACGGTCAGGTCGTTCCATCCCGACAGCGAGTAGT
CCCGCATCCTCACAGAGTATGATTTCTCTCTCTTTCTCTTGCTCCAAGTA
TGACCTCGATTTTTTCTTTTGCTACGGCCTCGCTTTTTGTCTTGCCATTA
AACAGTATAACCTCGCTTCATCGTTGTCGTTGCCATTCTGACAAGAGCAG
GCTTCTCGTTTTCTCTTTAACTTATCCTATGATAGTGGATTGATGGGATC
TTCCGCGTATGATATACTGCCGCTTGGGTAGGTAGCCTGTGACCACGGAC
ATCGTCCATGATCGGAGGCGCACGGACATTAGAAGCAAGCACTAATGAGA
TATCGGAATGGTTTCTAATGTGAAGACAACACACACACACGAACACACAC
ACACACAGCTTTTTCGTTTTTTCCTCCTAGCACGATATGTGCCTGGTTTG
TGACCACGGGCTAGACGGCGGCGGTAGTGAAGTAACGTGAGAATCAACAC
AACAACAACATCAGCACCGGTTGGTGATTCTCTTCATCGTCGTCGTTATC
TCTGTCGTTGTCGTTGCCTTCGTCAGTGCCAGGGCGCTGTTCGACAAGCT
CTGCGACACCTGGAGGACTATCAATTTAACCAAGAACAAGAAGGTGCCGG
ACTGGCGACTGTTCGTCTCGTGGATGGCGGCCCTCTGCACGGATCTTACC
AGCATGGTGTCCAAGGTACTTGCGCCCTTTCTTCTCTCCATATCTCTCTC
CCTCTCTCTCTCTGTCTCTCTGTCTCCCCCCCCCCTCTCTCTCTCTCTCT
CTGTCTCTGTCTCTGTCTCTGTCTCTATCCCTCCTGCCGGGAGAGAACGA
ACAACACACAGGGGGCGCTTTTCGACATTGCGGTACGTTGCCGCTTTTTA
AGCTGTGGGTTTACCGAGCATTCCTATCCTCTTCGCTGCTGTGTAAGTTT
ATTTCTTCGTGCCACGATACCATACGGCAAGTTGTACATAACGGGAAGAG
CTTTAAAACTCGGCGGCGCCACCATTGAACATTACCGCCAGGCCGCTGCA
GCTGCCTCAACAGGGTTGGTCGGCCTTAGGGTACGTAGCCGCAGCGCAAT
ATCAAGCATTCCGCGTAGCCCCCCGGCGAGAGCGACACGAAGGCACGACG
GGCAGGGCACCCCAACGTTCATCTGTGTGTGTGTGTGTTTTGTGCGTGAT
GTACGAGCACCCTGGCAATAGAGGGACCCCCCCCCCCCCCCACGGCTCCT
CACGCTTTTTTTTTTTTCGAGGCTGTGTTCTCTGTAGTTTTGTATCTTTG
GCCACCACAGATGGTACGGCAGTACTCCAACGGTACCCTATCTGATTTTG
ATTCGGTGACCATCGTTTATTAGCTAGCACGATAGTACCTGGGTTGTGAC
CACGGGCTAGACGACGGTGGTGGTAATGAGCTAATGTGAGAATCAACAAC
AACAACGCGGTACAGCAGTGGGCATCTGGCTCCTTCCCCGCCTTGCCCGA
AAGTGAACAAGCAACACAGGATAAGTAACTGTTTTTGCGAAACGTGTAAC
AAGAGGTATGTGGGTCTCGAATACTGATATCATATCATACGAATAAGCAC
TGGACGCGACCTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT
ATTTTATATTCTGTTTTCTTCCATCAGATACTTGTTTATATGATACAATA
GTATGATAACGTCGTGTCACTGTATACTATGTAGGTCTAATATACTGCCG
TGGTGAACAAAACGCTGGACGACTTTATTTTCTGTTTTCGTCTCTATCAT
ACCTGGTATACTTGTACCAGGTACATAGTATGTCAACGCCATGTCATGTG
ATACTTCGAAGTATGTATTCTCTTGTCCAGATCCCGGGGTCGGACCCGCA
GAACCCACGGTACGTGGTGAACATGGCCAAGATGGTGCAGTACATGCGGA
GCAGCCTGGTCAAGTGCACCGCGAGGGACCGCTACGGCAAGGAGACGGCG
AGGATCATAGAGGTGGGGCGCGCGCGACCGAGCCCGGTTGTTCTTGCTCT
CTCCTCGGCGGCTGGTGGCGGTGCTGATGTTGACGTGTTGTGCTGTGCTT
ATTGTCTTGATGTCGTTTGCGGGCGTTTTCGTCTTGCACGCGGCGCTCAC
CAACACTCCCTTCTCTCTGTGCGCTCCGTTGTCATGCGGCAACCTCTGCT
GCAGGCACGAGGCGTTGGGTTATTTTGATGCGTGTTTCGGCTCGTCGCTT
GTTCGCTGATGGTATGATACAGCTCGATCTTCGCTACTCCTGCGGTTGTT
GTTGTTGTTGATGTTGATGTTGATGTTGTTGATTCTCACATTGGCTCATC
ACCACCGTAGTCTATCTAGCCCGTGGTCACAGACCGGGCACACATCGTGC
TAGGAGGAACCACGAGCAAAGGAAACAAACGATGGTCACCAAATCAAAAT
CAGACACAACGGGTACCGTTGGGGTACCATCTGTGGTGGCCAAAATAGCA
AAAAAAAAAAAAAAAAAAGCAGGCCCGAAATATGTTAATAAATAAAATGT
ACTGAAGTATATATGAACGGCTGGGGCATACCAGACCAGTACCGGTATCA
CACACTTTACAACGTACCGCGAGTACACCGGCACATCCACACGCTGTGCG
GAGTATTTCTCCCCAGGCGGCAAGGGCTTGGGCTTCCCTGATGCCTTCCT
TGCGCTCGCCGCGCGGCCCGAGTACTCCTGCAGCTCTCGCTGTGCGCGTC
GATTAGTCGTGGGAGGCGTTGGCCTGAAAACACACATTCGTCGATACCTG
TGACGGTCCGACGTATCGACACTGTTCTCGTCGTGTCGTGCGTTATCTTC
CTCCCTTGGAAAGAGTTAAATCGTGTTAGATGCCGAGAGAGTGCTGCTGC
ATCGAAGATAGTAGTCAACCCGTTGTCGTGCTCTCTGCATGATATCCCTG
TTTTTTTTTTGCTGGTGTGGCAGAAGACTCGCTTCATACCTTGTGTTGGA
TATATCGGCGGCAACATCAGTGCCGATCTCCGTTTTTGAGGTCTGGAAGG
AAAAAAAACAAACAATTTTCGTTTTTTTTTCGTCTTCGAAGTGGCCGATC
TTTACTCGATCTCGATCTCAATCTCGATCTCGGTTCCTACTATGCCGTTG
AGAGAATGCTGCTGCATCGTGGTAATCAACACGTTGTCGTGCTCTCTGCA
GGATATGTCTGGGTTGATTGCTGGTGTGTGAAGAAAACCCGAAGACTCTC
TTCGTACACGTATTTCGTGCGGTTACGCCTTTGGTCCAGATTCTTCTGCA
AAACAAGTTTCTTGACCAGCAGCAAGTGGGTGAGATGGCGATGATACCCC
CCAGCGACGCCAGAGAGAGACTCTACCAGCTTCTGAAAGACAGGTGCGAA
GGGAACACGCGGCGTTAAGCTGACGCCTGGTGCTGTCGGCAGTGGTTCCG
TTGCTGTCATATGATATCTATGGTGTCGTTTGCCTCTTGCGAGAAATGTG
GCCTCCTGAGTCGTTGTCAGGATCGTCTTCACCTCCTTCTCTTGCACATT
TTCCGGCGAGTCATAGAAACGCAGGTATGAAAGATGTATCTTGTTCTTTG
TGCCCGTTGCTAGTCTATCACACTCCAGACCCTCGTCTTCTGGAGAGAGA
CGAACACGTTGATCGATGTGTTCGTAGAACGAAGAATTTTTTCGATGAGG
AGTTACATTCAGTGAGTTTTTCTCCAACCCGGAATGGTGGCGAGAACTCG
GCGCGCCTCACAACGCAACGCACTGCTGTTGTTGCCCTGTGACCGGTGCA
CAATTACGCGTACCGTACGAATTGAATATGGCTTCCGGGAGTGGTGTCTA
TCTGACCCTCGGAGTCATGACGAATGGCGCCAACGGCAGCTCAAACGGTC
CTTACCCCCTCTCCTGCCTGCGGTTGCACTGTGTCTCACCGGGACCTCCG
CTGTCAGGATGGTGTCCGTGCAGGAGGTGCCCAAGCGAGCGGACCACAAC
CCCAGCACAACCTTTTACCTTTGGACAATCAAGCACGACCAGGTCAGAAG
GAGGGATGTTGCAACAACAAATGTGATTTTTTTGTGTCTGCCTTTCGCCT
TCAACCTTGAACCGCTGCCGTGCCTGACTCACACCTACGCACGTTTTGGC
CCGCCGGAACTTTCCACGGAAAAAAAAAAAACCAAAAAAAAAAAAGAGAG
CCGCTCTCCAAAAAAAGGTTCATGTAGTTCGTGCGTGACTGGTGGGTGGG
TTCGGTGCAAGTCGAAGCATGCTGTAGCAAATTCGACCTCGAGATGTTTA
CCTTACACGGCAGTGGGGCTTCCGCGAGGTACATACGTGGATCGATGGGA
TCTCCCGCGTGCTGTATACCCCTTCCGCGAGGTACATACGTGGATTGATG
GGATCTCCCGCGTGCTACAGTATATATCGCTTTCGGGTAAGCAGCCTGTG
ACCATGGAAATCGTTCATGATCCGAAGAGTGCGGACGTTAGAAGGTACTG
AGGAGAGGAGAGATCGGAATGGTTTTTCATGTGAAGACAACACGCACATA
GCTCAGCACATCAAAAAGTGGCCTCTGCCTGCAACGAACGGTGGATTCTC
CTCGGCGGGTACATGTCACAAGATGCCACACCCCTCGGGCTGATTGTATT
GTTTCAGCTCCTCCACGAAGAGGGTACAAATGCCAAACGATATGTTTCCG
ACAAGCTCTCGACAAGATCTTACCGTGATAATGCCTCCTTTTATTTTCCG
CCACCATTATGGGCACTGGCGCTTGTCTTGCCGTGGAGCAATGAAAGCTT
GAGGGGCCGCTGCCAACCTGTTTTTGATTTGACCAATTTTGGAAACTTGC
GAAGTATGCGTATAGCACCCAGTAATCACACACTGGGCACCTCACACCAG
GAGGACGGTGTTTAGCTAGAAAGAAATCGTTGATAAGCACAGAGCGGCGC
TAGAGGCTTCTCTTCACATGCACATTTCACGAAATTACCCTATGTGTGTG
TTGTCATCCCATATTCTCTGGCACACTAGTCTGCACCCTGCAGGTTCAAA
CTACAGGCTAGGCCCATCGACGGGGTCACACAGGAGGAAGGTCAACACAG
GAGGAGTTACCCCCACCTTCCTTCTGCGGTACATGCGTGATATTTTTTCT
CGCGAGCAGGGATCCGCGGTCCCTACCCTCGTCGGCGAAGCCGAATCTGC
TTTTGCTAACAGCATAGCCGCTTTCAAGGTAGCAAAGGAACACATTCGCC
GGGAATCGAACACCCGTTCCTCTGCATGTAGTGGTTAACGAGGGGACCAC
TAGTCGTCCACCGGGGCGACCGGGTGTACCGGCGTATGGCCGACATTTCG
AACATATTGGACTGGCGCAAAATCGATAGATAGATAATATCGTTTCGTGC
GATACATCGGCCTATATCGTATACGATACACAACCCTACACATCACGAGT
CTACCCCCAATCCCCCCCTCTAAAACCAAGACAAAACATCCCACTAATCT
AAAATCAAGACAAAACAGCCAATAACGGCTTAGGCTCAAATAAGGGTTCC
CGCCGGAGGAATCCTATTCTGAAAGGCGATATCAGTAAAGGACACTCTGC
AGCAGCGATGGGTGTATCGGCACGTTCAGATCTGCTGCAGGGGCTTAAAT
ATCGAAGCCCGCAGTAGTGGCCAAAATACCCCGCAAACTGGACTGAAACC
AAAAAACGTCTTCCACTGCTGCGCTCGCCGCCACAGACCCTAACCTCCTG
AGCTACGTGTAAAAAGCAACTAACACCACTAGTTACCTCGGATGACCCGC
AGTTCAGGAGGTTAGGGTCTGTGGTGGCGAGTACAGCCACATCAAACGTT
TGGTGTCGGTCCGGATTGCGGAGTTTTTCAGCTATGCTGCGGAGTTTTTC
AGCTACTGTTGCGGTCCTGCTGCGGCCCTCGATATCTTCTCCCCAGCAAC
AGATCTGAGCATGCCAATAAACACGTCGCCTCTCCATGGTGTCCTCTGCT
GAAATCGCCGTTCAGGTTGGGACTCTCATGGCGGGAAGGTGTTTTCGTGT
TTTTGGCCCCTTATTATATTGGATTTAGGGACTAAATATTTACCCCCCTA
GTCAGCGCCCCCTTAACCCTTTTATCATACCCCCCCCCCCCCTGTGAAAA
ATTGTGATATTTTTTTTTTAACAAAAGATCTGTAAAAGCAAGTGAACGCG
TCGCCAAAAAAAAGGGTCACGCGTTCACTTTCTTGTAGAAATTGAGCGGT
TATGACAGCGAGGTAAAATTTTAGCTATTGGGAGTCACGAGATATTCTAA
GTGACGAATGGCGAAATGGCGACCCCAAATGGCGACATTTAGCTACCTGG
GGGTAAGAGGGTTGAGTTCTCAACATCAGTCCCAGGGATGTGGTATCTTG
CGTCATGTCACCTCCTACGGTAAGCAGTCGATGCCTTTTGATGCGCATGA
GTTTTGTTAGATTTTCACTTTACCACTCTGTGCTCAACTGTCAGCGGCCG
GCTGTGTAGCATAGCAGTGGTGAGTGTGTATCTATCGAGAGCAACATCCG
GGGCTCGAACAGCTCCTAGCCGATGAGCCACGGAGAAGTGGACATCTAAC
AAATTACTTCGTATACAGTGGGTGAAACGGAAAAGTGGATATCTAACAAA
TTATACAGCAGTAGGTGGAACGGAACAGTGGATATCTAACAATTCATACG
TATGTAGTGACGATAAATGATTTTTCCAGACACGAAAGGGCCGCGTAGTG
AAAAAGAAGCCCCTTCGGTGTGAATTTTTGGTGGAATCGTACTTGACCAC
ATGATGCGGGGGCGAAGGTGCAAGTGTGTGGAATATCTAACTCCTGGTAA
TCTCGAGTCGCTTCGTTTTTCGTGTTTTTACTCGCAGCTTGCTGCTCGCG
GGGCATGTGTTCCGATAATCGCACTTTTTCGTAACTCTAAATCACAATGA
AATGCCTTTTTTTTCATGTCACATAAAAACACATCAATCAATGTGTTCCT
CTCTTTCCAGGCCAGGATTTCAAGTAGATTAGCAACAGTAACAAAGAATG
AGATACACCTACATACGTGCGTTGAAAACATGTTCAACATCAGAGGAGGA
ACGACCAGCGGAAACAGGAGGGACTTAAGGGGTAGACATCATCTTTATTT
CCATTCGTTTTTTTTCCACTGAACGCTCTGGTTACTACAGCAGTCCGTAG
TGTATCCCAGTACGGACTGATATGACCCACGTTTTTTTGTGTCTCTGGCG
TTTTTATACTGCAACAACGTATGTAGGTGGCGCAGGTAGTCCTGGACACC
TTGTACAAGGCGATGCTAAACATGCGTCTCCGGAGAAAGTTCGTGTACTG
CAACGACAAGGTAGGTTGAAGTTGAAGTTGAAGTTGAAATGGAATACGCA
CATGACCGCGCCCGTTGTACTTTGCTGTTCGGTTTGTAGCTGGCGTGCGC
TGCTTGTTTCCTGCACGCCCCTGGGGGGTGTATCCACGACCTGGTTGCAC
TTCGAAACCCAAGGCACACGAGTACACTCAGGTCTGTACATCCTTTTCGA
GACACCTACTGTACAGGTACTCTGTTCATGTATAGTGTGGATTTTGTTTT
GGTTGTTTTTTTAAGCGTGTGCTGCATGACAGCGCTCGTCGGCCGTCAGC
TGCTGCCAGCCATCGTGTCTGGACCCCTGGAGAAGAAGCTTCGCGGAGGA
CAAATCAACTTCTCCAGTGAGAGGCATGAGCCTCCAACCCTCGCCCAAAG
AGGTGACGCAGGGGGAACGCCACCCTGTGTGTGTGTGTGTGTACCGCGTG
TCATGCGGCTGATTTTTCCATGTTTTCCCCCTCGCGGATTTGGCGCTGTT
TACCCTCCGCTCGCTGTGCCCCTCTCTCGCGTACCGTACCGTAGGAGCTC
TTCATCCACGACGCCGCGGCCCGGCTGTCCAACGACGCCGAGAAGGAGAG
GCTGGACCAGGTGCGGCGGTCGCTCGACAGGCTGGACACGGCTCTCTTGC
GCTTGGACGAAAACCTCATGTTCTTCAACACCTTCTAGTCTGCGTGCGCC
ACTCACTCACACACACCAATCAAGGGTCGCGCCTTGGCACGCGTGTGTGT
GTGTGTGTGGTGCGTGCAACATGCTTCGTTCGAAGTGTTTTTTTTTAGCT
CTTTGCAGCTTACTTCTTTGAAAGCTGGTTGCGCCTGTAACTGCTACGTC
GTTTGAGGAAGAGGTGCAAGGTCTTACTCTGTTGTATAGCAGCATGAATG
AGAAGTTTAGTGTGTCGGTTTTGGCAGTGGTGTGTACCCCGTTTGCCGTG
CCTTGTGAACCCAAGCGTTGCGTGATGAGATGGCCACTCGAGGCGCGTAC
AGCATTCGAATTTGTTGTCGGTCGAAGTTCCTGTTCCGCCATAGGGTCCA
TTCACCGTTGCTACAGTAAGTTGAACGCCGGCAACGTCGCATATGAAGGC
GGTACGTGCACTCGTGCAAGATTCAGCGGCGTATAGATGTGTTCGTACTA
CATTATCTCACACATTGAATGCTTCGCCTTGCGGTGTGTGCCTAACCCAG
CTTTGTTGTAGTTTTGGGTTGTGTGGTAATCACGTGGTCTGTTGTGGTTT
CGTGCGGAATGCTTCCGACTGAGTGTCACACTTTCGAAGTATGAATACTG
CGGGAGATTTTGGCGCGACGATGTGCTGTGACCAATCTAGTTGAAGCGAT
GCGCTCAGCCTTGAACTGCACAACAATCTTGTTGTCGCCTCTTGACTTGA
CCAGCGGTCGAGGACAACAACCTACCGGTATGTGACACCTTCAGGCAGTC
CTGTGGTAGTAATAATGGAAGCCTTGGTCGGGGCTTGAGGCTTGGGGGTG
GCTTGGGATATTCTGACTCGATTGGTGATGGGCGTTCTCCAAATCGCGGG
AACAACAACCGACCCCGCGTTCGATACTCGGTAAGCAGGTTGGAATCATG
GTCCCCTCCAAGGATATGAAGGGCGTTTTTTGCGAGAGGCACCGCTTCCC
ACCTGGTGTACTTACTATAACTTACCCGACGTGTGGGCACCACAGCACCC
CACGCATTTTTTTATTTTGCCTAGAAACACATCATCAAAATCAATGTGCT

Coding sequence (CDS) from alignment at P-littoralis_Contig155:461876..473125+

>mRNA_P-littoralis_Contig155.95.1 ID=mRNA_P-littoralis_Contig155.95.1|Name=mRNA_P-littoralis_Contig155.95.1|organism=Pylaiella littoralis U1_48|type=CDS|length=981bp|location=Sequence derived from alignment at P-littoralis_Contig155:461876..473125+ (Pylaiella littoralis U1_48)
ATGGGCGGCGTTTTTGAGGAGGAAGGCGCGGAGAGGGAGGGGGAGGGGGA
GGGGGGATTTTGGCCGGGGGGCGGTGGGAGGGGGGTGGGGGCGGGGGCTA
CGGTGCTGGATGGCGTGCTGTGGAAGCTCGGAGCTGACAAGTTCCACCGA
GATTTCCGCAACAACTCCCTGCTGGGGTTGGTTCAGGACAGGTTTCCCAA
AAGCAAGCTGGCGTATCTGGCGGTGAAGGTGATGCTGGAGAACTCCGCCC
CTACGGAGAGGAAGGTCAACGAGCCAGTGTCGGCCTCCATCAGTGCCAGG
GCGCTGTTCGACAAGCTCTGCGACACCTGGAGGACTATCAATTTAACCAA
GAACAAGAAGGTGCCGGACTGGCGACTGTTCGTCTCGTGGATGGCGGCCC
TCTGCACGGATCTTACCAGCATGGTGTCCAAGATCCCGGGGTCGGACCCG
CAGAACCCACGGTACGTGGTGAACATGGCCAAGATGGTGCAGTACATGCG
GAGCAGCCTGGTCAAGTGCACCGCGAGGGACCGCTACGGCAAGGAGACGG
CGAGGATCATAGAGATTCTTCTGCAAAACAAGTTTCTTGACCAGCAGCAA
GTGGGTGAGATGGCGATGATACCCCCCAGCGACGCCAGAGAGAGACTCTA
CCAGCTTCTGAAAGACAGGATGGTGTCCGTGCAGGAGGTGCCCAAGCGAG
CGGACCACAACCCCAGCACAACCTTTTACCTTTGGACAATCAAGCACGAC
CAGGTGGCGCAGGTAGTCCTGGACACCTTGTACAAGGCGATGCTAAACAT
GCGTCTCCGGAGAAAGTTCGTGTACTGCAACGACAAGGAGCTCTTCATCC
ACGACGCCGCGGCCCGGCTGTCCAACGACGCCGAGAAGGAGAGGCTGGAC
CAGGTGCGGCGGTCGCTCGACAGGCTGGACACGGCTCTCTTGCGCTTGGA
CGAAAACCTCATGTTCTTCAACACCTTCTAG