mRNA_P-littoralis_Contig155.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: D8LJH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH1_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 4.330e-17 Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 103 VRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPRFPTMCKKIEAKG 351
VR N + E AFLLL+ RMRYPGR DL+ FGREY+QLSR+F D+++E H HRV NL F+ P + + + KG
Sbjct: 46 VRLENGSTFSGEEAFLLLLMRMRYPGRLSDLEKYFGREYSQLSRLFRWATDFLFEMHSHRVMDNLAFWGPHLRSFARAVYRKG 128
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: A0A1W0WRP1_HYPDU (Uncharacterized protein n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WRP1_HYPDU) HSP 1 Score: 70.9 bits (172), Expect = 6.510e-13 Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 7 IDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVT 288
+D I D N+R +L+ L A FP + NR + P LL+RR+ YP R HDL++ FGR + LSR FN+V D+V+++ H +T
Sbjct: 33 LDKIADVHCKKNFRFLPKDLQELCDALRFPAFFIADNRSKMPGLEGLCLLLRRLVYPVRLHDLEIVFGRVMSVLSRFFNIVADYVFDHFGHLLT 126
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF) HSP 1 Score: 67.0 bits (162), Expect = 1.340e-10 Identity = 39/115 (33.91%), Postives = 59/115 (51.30%), Query Frame = 1
Query: 7 IDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFFPRFPTMCKKIEAKG 351
++ ++D + +R K +L RL A P + L+++RR+ YP RW DLQ FGR ++LS IFN VID +YE+H H + L+ + T + I AKG
Sbjct: 91 LEDLSDTQCQQMFRFEKQDLYRLRDALQVPANYICSQGTKATGLEGLLIMLRRLAYPNRWCDLQSLFGRSESELSLIFNEVIDDIYESH-HHLIDALDLVWLDPQTFSQAIHAKG 204
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: UPI00106C0330 (uncharacterized protein LOC114542457 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C0330) HSP 1 Score: 66.6 bits (161), Expect = 1.680e-10 Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 1
Query: 7 IDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLH 279
I+ ++D + +R K ++ RLF A P + R R + A ++L+RR+ YP RW DL FGR +QLS IFN ++D +Y H
Sbjct: 50 IEDLSDWQCEKMFRFHKDDMLRLFAALRIPAYYRAEQRTKASGMEALMILLRRLAYPNRWCDLVGIFGRSESQLSLIFNKILDDIYNRFGH 140
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: UPI000F558385 (uncharacterized protein LOC113685269 n=2 Tax=Astrocoeniina TaxID=123757 RepID=UPI000F558385) HSP 1 Score: 65.9 bits (159), Expect = 2.660e-10 Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 1
Query: 7 IDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVT 288
+D + D E +R RK E+ RL + + PE P LL+RR+ YP R+ DL FGR +LS I+N+V+D +Y H +R++
Sbjct: 4 LDAMDDTECKAEFRFRKNEISRLAESLDIPETFFCHQGTTAPGIEGLCLLLRRLTYPCRYSDLIPRFGRPIPELSMIYNIVLDHIYNTHGYRIS 97
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: UPI000F54E81C (uncharacterized protein LOC113676671 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F54E81C) HSP 1 Score: 65.1 bits (157), Expect = 5.940e-10 Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query: 7 IDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFF 306
+D +D E T R K L L PE + V R +L++R+ YP R+ D+ FGR T+L IFN +ID++Y+NH HR+ +FF
Sbjct: 50 VDEWSDVECKTELRFAKKHLPELCECLGIPEKITCVQRTVCGGMEGLCILLKRLAYPCRYTDMVPRFGRNPTELCLIFNTMIDFIYDNHNHRLRSWDQFF 149
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: A0A836CJM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJM3_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.310e-9 Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 1
Query: 4 VIDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIF 240
+ ++ W +R RK ++RL RA P+ V NR + + A L+ + R+ P R D++ FGRE TQLSRIF
Sbjct: 25 TLVSFAEDACWMQFRFRKEHIQRLRRALGVPDVVVLPNRSKDDGDEALLIFLHRLSRPSRLTDVKETFGREETQLSRIF 103
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: A0A6S7K945_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K945_PARCT) HSP 1 Score: 60.5 bits (145), Expect = 6.840e-9 Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 1
Query: 7 IDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLE--FFFP-RFPTMCKKIEAKG 351
+D TD E N+R +K ++ L A P N S +L+RR+ YP R D+ FGR T+LS IFN V+D+V+ H H + NL + P + M + + KG
Sbjct: 50 LDKYTDEECVLNFRFQKVDVLHLVTALRLPNQFLCKNGTIAGSLGGLCVLLRRLAYPNRLTDMIAMFGRSKTELSMIFNNVVDFVFAQH-HSLLSNLNVPWLAPEKLMEMTRAVHEKG 166
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: A0A6P8HEE0_ACTTE (uncharacterized protein LOC116291725 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HEE0_ACTTE) HSP 1 Score: 62.0 bits (149), Expect = 7.390e-9 Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 1
Query: 16 ITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLH 279
ITD + T +R +K ++ L PE R + A ++L+RR+ YP RW DL FGR ++LS IFN V+D +Y+ H
Sbjct: 57 ITDADCETMFRFQKNDMEHLLDCLQIPEHFVCSQRTKATGMEALMILLRRLAYPNRWCDLVPIFGRPESELSLIFNKVLDDIYDRFKH 144
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Match: UPI00106D38F2 (uncharacterized protein LOC114539259 n=4 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D38F2) HSP 1 Score: 61.6 bits (148), Expect = 1.010e-8 Identity = 31/101 (30.69%), Postives = 52/101 (51.49%), Query Frame = 1
Query: 7 IDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLLLIRRMRYPGRWHDLQVEFGREYTQLSRIFNVVIDWVYENHLHRVTHNLEFFF 309
++ + + E R RK ++ L A PE+ + + +++R YP R+ D+ FGR +LS I NVV+D++Y++H HRV+H E F
Sbjct: 49 LEKLENTECEAELRFRKNDIPELAEALGIPEYFKCPQGTKADGLEGLCAVLKRFAYPCRYSDMIPLFGRAVPELSMITNVVVDYIYDHHGHRVSHWNEMLF 149 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig155.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig155.11.1 >prot_P-littoralis_Contig155.11.1 ID=prot_P-littoralis_Contig155.11.1|Name=mRNA_P-littoralis_Contig155.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=117bp PVIDGITDNEAWTNYRSRKPELRRLFRAFNFPEWVRPVNRGRYPSESAFLback to top mRNA from alignment at P-littoralis_Contig155:20185..21349- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig155.11.1 ID=mRNA_P-littoralis_Contig155.11.1|Name=mRNA_P-littoralis_Contig155.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1165bp|location=Sequence derived from alignment at P-littoralis_Contig155:20185..21349- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig155:20185..21349- >mRNA_P-littoralis_Contig155.11.1 ID=mRNA_P-littoralis_Contig155.11.1|Name=mRNA_P-littoralis_Contig155.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=351bp|location=Sequence derived from alignment at P-littoralis_Contig155:20185..21349- (Pylaiella littoralis U1_48)back to top |