mRNA_P-littoralis_Contig1549.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: D8LDI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI7_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 6.360e-7 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = -3
Query: 180 ITENALSIIADDG*KSHSLRTRSNHVGSSFL*ANQKSLVDRERSGRCLTMGK 335
+TE A SIIA+DG +SHSLRTRSNH GSS L +QKS V+ ++SGR LT+ K
Sbjct: 1 MTEKARSIIAEDGCRSHSLRTRSNHDGSSSLLHSQKSRVEVDKSGRLLTVEK 52
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: A0A6H5JEX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX4_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.730e-6 Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 187 IVKHLPDLSLSTKD---------FWLAYKKELPTWFDLVRKLWLFQPSSAMMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHNRG 417
++K D ++ D FW KK+LPTW LV + L QPSSA MER FS++ F ++Q + +D +V+L++NRG
Sbjct: 69 LLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRG 154
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 5.040e-6 Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 205 DLSLSTKDFWLAYKKELPTWFDLVRKLWLFQPSSAMMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHNRG 417
D FW KK LPTW +LV + L QPSSA MER FS++ F ++Q ++ +D + +L+++RG
Sbjct: 320 DTDYDNMTFWSDNKKNLPTWHELVLDVVLLQPSSAFMERVFSILRCCFSERQESVYSDRICASALLKYSRG 390
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: A0A6H5KCX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX4_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 5.740e-6 Identity = 33/97 (34.02%), Postives = 49/97 (50.52%), Query Frame = 1
Query: 127 PASEGQMFSNLTK*VVTYFPIVKHLPDLSLSTKDFWLAYKKELPTWFDLVRKLWLFQPSSAMMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHNRG 417
P + +M L K Y+ D+ FW +K LPTW LV + L QPSSA MER FS++ F ++Q + +D + +L++NRG
Sbjct: 59 PFVKSKMVKGLLKEKEDYYMAASDT-DIEYGHMAFWKDNEKRLPTWHALVLDVALLQPSSAFMERVFSILPCCFNERQEHVYSDRICASALLKYNRG 154
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: A0A6H5KL31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL31_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 8.840e-6 Identity = 33/97 (34.02%), Postives = 47/97 (48.45%), Query Frame = 1
Query: 127 PASEGQMFSNLTK*VVTYFPIVKHLPDLSLSTKDFWLAYKKELPTWFDLVRKLWLFQPSSAMMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHNRG 417
P +M L K Y+ + D+ FW KK LPTW LV + L PSSA MER FS++ F ++Q + +D + +L+ NRG
Sbjct: 475 PFVNSKMVKGLLKEKEGYYMAASNNTDIEYGHMAFWKDKKKRLPTWHALVLDVALSPPSSAYMERVFSILRCCFNERQQHVYSDRICASALLKFNRG 571
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.270e-5 Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 187 IVKHLPDLSLSTKD---------FWLAYKKELPTWFDLVRKLWLFQPSSAMMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHNRG 417
++K D ++ D FW KK+LPTW LV + L QPSSA MER FS++ F ++Q + +D +V+L++NRG
Sbjct: 597 LLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRG 682
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: A0A6H5KTX0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX0_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.320e-5 Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 187 IVKHLPDLSLSTKD---------FWLAYKKELPTWFDLVRKLWLFQPSSAMMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHNRG 417
++K D ++ D FW KK+LPTW LV + L QPSSA MER FS++ F ++Q + +D +V+L++NRG
Sbjct: 680 LLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRG 765
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: A0A1X7V8N5_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V8N5_AMPQE) HSP 1 Score: 55.5 bits (132), Expect = 1.970e-5 Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 214 LSTKDFWLAYKKELPTWFDLVRKLWLFQPSSAMMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHNR 414
L+ +F A+ +LP+W + +K+ L QPSSA +ERAFSV F +QQ++ + D E ++M ++N+
Sbjct: 123 LTQLEFQKAHADKLPSWGETAKKVLLLQPSSAAVERAFSVYKFTFSEQQLSSLEDYIEASMMPQYNK 189
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Match: A0A1X7TYF9_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TYF9_AMPQE) HSP 1 Score: 56.2 bits (134), Expect = 6.610e-5 Identity = 25/69 (36.23%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 205 DLSLSTKDFWLAYKKELPTWFDLVRKLWLFQPSSAMMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHN 411
D + ++W + +LP W +K++L QPSSA +ER FS++ + FG +Q T + D E ++ML++N
Sbjct: 582 DKEVCPLNWWKQNQDDLPVWSREAKKVFLLQPSSASVERVFSLLKSSFGDKQETALQDYIEASLMLQYN 650 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1549.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1549.1.1 >prot_P-littoralis_Contig1549.1.1 ID=prot_P-littoralis_Contig1549.1.1|Name=mRNA_P-littoralis_Contig1549.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=45bp MMERAFSVMNNVFGKQQMTLMNDLFELTVMLRHNRGVRRDARKD*back to top mRNA from alignment at P-littoralis_Contig1549:44..1204+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1549.1.1 ID=mRNA_P-littoralis_Contig1549.1.1|Name=mRNA_P-littoralis_Contig1549.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1161bp|location=Sequence derived from alignment at P-littoralis_Contig1549:44..1204+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1549:44..1204+ >mRNA_P-littoralis_Contig1549.1.1 ID=mRNA_P-littoralis_Contig1549.1.1|Name=mRNA_P-littoralis_Contig1549.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=135bp|location=Sequence derived from alignment at P-littoralis_Contig1549:44..1204+ (Pylaiella littoralis U1_48)back to top |