mRNA_P-littoralis_Contig154.115.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig154.115.1
Unique NamemRNA_P-littoralis_Contig154.115.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54)

HSP 1 Score: 521 bits (1343), Expect = 6.320e-172
Identity = 363/807 (44.98%), Postives = 442/807 (54.77%), Query Frame = 1
Query:    1 MVVPSSSTNS---RVXXXXXXXXXXXKVPDFLQTVGSLYPVECRTKDRKLPRKYKGTYCCQLFARVKLGQHVSKKLRTRTVSVGFRAATSGEKREAFQEKVDEAVHHLSRERVLASLFANFVFLERLREGSALPEPDRSFFKSCLSSCIISRGGGSLNEDFDRFSSLTGLKRHDPPKELNLDQQREHEAGCMATSTSTRAEHHTEKRRTSITKWFLRGRIPRGELENKKYASSLYNLAKAIITEFDGTHEGEQNVQERALAIDPAAEADSIITFARREKEFSDRVCGDKTSALRIKHLNWMFNTYVAESRWRYDEALSRAHAFSPGEDKESSKKRYVFMGSELGEDNAHPPPKDAAVLPICSTRSVFIHIATLT*K-----------------RSSIGGFRVPTMPGGSATFSDPSRRGQMSSVLGARRTPSTRRTNSGICRVYWKVAR-ISARGWSLRASSQTAFRSNCYC*PLSTQGGR--FPGPANSTRRATTSYPVPTFPWKVCCVRGEVFTTFRLSTLLPVYPTISWLCPLTLVRRRLLTL-VEPYRKYGQRKTQGIFCQLPHAALEMITAGTPSRRVRTSTS--GSDGGAGLMAKPSIALVTKEREPR---VSLRSLGTV--RAGALTG--RHCSMRLCRRVVISFGLDATGLRNRL*QR*RTS--TWA*WGRR----VGSCCLVR------------RRSMPKRGERLPQERPW*GRWLPEVCVNGK*ASTSKKCPRRLGDTVEDKERRTRSCRNFSIGHPEESCRLHPLTQEFQMDRDDLGSTNIGMRGFGLLRGQHWF 2268
            MV PSS  NS   +             +P FLQTV SLYP +  T    LP+  KGTYCCQLF+RV+ G+ VS++LRTRTVSVGFRAAT+ EKR+ FQ KV++AV HLSRERVLASLFANFVF+ERL+ GSALPEPDR+FFKSCLSSCI+SRGGGSLN DFDRFS +TGL R  PPK +NLDQQREHEA  MAT+TSTRA HH EKRR SIT+WFLRGRI RG+L+ KKYA+ LYNLA+ IIT FDGT E  Q ++  + AIDP  + + II FA +EKEFSDR  GD  SA  IKHLNWMFNTYVAESR  Y+EA+SR+H F+PG+DK   KKR  FM  ELGE+  + PPKD AVLPICST +VFI+I   T                   R       V  +          S  G +SS+L            SG  +  W +       G  ++   +T             + GR  F G +    +     P           R +V     L     VY  IS L   T +R  ++ +  +P    GQ K   +      A         P   ++TST   G D     +A  S    T  R+ +   V++  LG    R   L    ++C        V+      TG +     R R +  T A    +    V   C V             R S P++   L +E    G     V +     +TSK CP    DTVEDKERR RSC+NF IG PEESCRLH LT EF+MDRDD+GSTNIGMRGFG L GQ WF
Sbjct:    1 MVRPSSDGNSHKKKKHKKIPPRAPPKNIPGFLQTVASLYPNQYLTASGNLPKSCKGTYCCQLFSRVRFGKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCILSRGGGSLNADFDRFSEITGLTRLVPPKSMNLDQQREHEAQRMATATSTRATHHAEKRRISITRWFLRGRISRGDLDCKKYATKLYNLAEKIITNFDGTPEDTQKLRTMSRAIDPGTDTNIIIDFAWQEKEFSDRDRGDGKSAETIKHLNWMFNTYVAESRRMYEEAVSRSHLFAPGKDKACRKKRDEFMKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLL-----------ESGPDKCPWMIGESFLTDGVQIKLLLKTL------------EHGRKAFSGSSELNEKGYNKLP-----------RADVQLESLLGEGRGVY-NISSLLKSTSIREDVVVMSADP----GQAKVINV----SSATARTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKFMRFDRFRATQKTLALIADKYMGHVEDTCRVMLFGKASFRAQKGRASAPRKA--LIREMASRG-----VVLMVNEYNTSKMCPGCGEDTVEDKERRIRSCKNFKIGSPEESCRLHRLTPEFEMDRDDVGSTNIGMRGFGKLLGQVWF 757          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC)

HSP 1 Score: 479 bits (1232), Expect = 3.270e-155
Identity = 336/781 (43.02%), Postives = 416/781 (53.27%), Query Frame = 1
Query:   70 KVPDFLQTVGSLYPVECRTKDRKLPRKYKGTYCCQLFARVKLGQHVSKKLRTRTVSVGFRAATSGEKREAFQEKVDEAVHHLSRERVLASLFANFVFLERLREGSALPEPDRSFFKSCLSSCIISRGGGSLNEDFDRFSSLTGLKRHDPPKELNLDQQREHEAGCMATSTSTRAEHHTEKRRTSITKWFLRGRIPRGELENKKYASSLYNLAKAIITEFDGTHEGEQNVQERALAIDPAAEADSIITFARREKEFSDRVCGDKTSALRIKHLNWMFNTYVAESRWRYDEALSRAHAFSPGEDKESSKKRYVFMGSELGEDNAHPPPKDAAVLPICSTRSVFIHIATLT*KRSSIGGFR-------------------VPTMPGGSATFSDPSRRGQMSSVLGARRTPSTRRTNSGICRVYWKVAR-ISARGWSLRASSQTAFRSNCYC*PLSTQGGRFPGPANSTRRATTSYPVPTFPWKVCCVRGEVFTTFRLSTLLPVYPTISWLCPLTLVRRRLLTL-VEPYRKYGQRKTQGIFCQLPHAALEMITAGTPSRRVRTSTS--GSDGGAGLMAKPSIALVTKEREPRVSLRSLGTVRAGALTGRHCSMRLCRRVVISFGLDATGLRNRL*QR*RTSTWA*WGRR-----------------VGSCCLVR---RRSMPKRGERLPQERPW*GRWLPEVCVNG-----K*ASTSKKCPRRLGDTVEDKERRTRSCRNFSIGHPEESCRLHPLTQEFQMDRDDLGSTNIGMRGFGLLRGQHWF 2268
            K P FL+TVG LYP +C T    LPRKYKG+YC QLF+RV+ G  VS+KLR RTVSVGF AAT    RE FQ KV+EAV HLSRERVLASLF+NFV++ERLR+GS LPEPD  FF SCLSSCI S+GG SLN DFDRFSSLTGL R  PPK LNL QQR+ EA  MATSTSTRA HH+EKRR SIT+WFL  RI  G    K YA+ L+ LAK IIT+F+GT E +Q ++E A A+D   + + II FA +EKEFSD    ++  A  I HL+WMF TYV+ESR +Y+E LSRAH+  PGE+KE SKKR  FM  ELG  +   PP+D +VLPICST SVFIH+   T K  S G F                    +  +     T    S +G +SS+L           ++G  +  W V       G  ++    T          L      F G +       +  P    P +    +G             VY  IS L     +R  L+ +  +P    GQ K   + C    A  E      P   ++TST   G D     +A  S    T  R  R +   +   R      R   +    +   S+  +++ L N   Q+ R   +  +GR                  VG  C V    + S   +  R    R    R + E+   G        +TSK+CP  L DTVEDKERR RSC NF +G PEESCRLHPLT   +MDRDD+GSTNIGMRGFG L GQ WF
Sbjct:   37 KKPPFLETVGKLYPQQCLTASGNLPRKYKGSYCAQLFSRVRFGNAVSQKLRRRTVSVGFLAATMDSTRETFQSKVNEAVDHLSRERVLASLFSNFVYMERLRDGSTLPEPDVKFFGSCLSSCIRSKGG-SLNADFDRFSSLTGLSRLVPPKHLNLGQQRQFEANQMATSTSTRATHHSEKRRISITRWFLWERISGGNSRPKDYATKLFILAKKIITDFEGTEEQKQKLREMAKALDSGMDPEPIIEFALKEKEFSDNFSANQKCAPTIAHLDWMFKTYVSESRRKYEEVLSRAHSLFPGEEKEISKKRNEFMKRELGRGDIIAPPRDTSVLPICSTGSVFIHVDMKTLK--SWGLFHSNDAWWYKNVLRPFSREANIKCLRSRENTRYASSEQGYLSSLL-----------DNGPAKCPWFVGESFLTDGVQIKLLLVT----------LEHTRESFSGSSQLNEEGYSKLPRADAPLETLLEKGR-----------GVY-NISSLVESESIRGDLVVMSADP----GQAKVINV-CS---ATSETWEKKDPVAILKTSTCVFGDDYRRETLASHSDEYETLRR--RGTSYGIAIDRLRDEKKRTSCLTTFIQYCRSWCANSSALMNETLQKGRR--FLRFGRHRATQSILARIADRFMGHVGDICRVMLFGKASFSAKKGRASAPRK---RLIREMAARGVVLMVNEYNTSKQCPGCLEDTVEDKERRIRSCINFKVGSPEESCRLHPLTPVLEMDRDDVGSTNIGMRGFGQLLGQKWF 766          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 464 bits (1193), Expect = 4.880e-149
Identity = 226/311 (72.67%), Postives = 259/311 (83.28%), Query Frame = 3
Query: 1104 HIDMKTLKYWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTCGFGDDYRRDTLASRSDEYEWFRWRSGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKYMGIVGAACRVMLFGKASFHAQKGGASAPRKAMVREMATRGL 2036
            +IDMKTLK WGL  SNDAWW+ DVLRPFSK AN+KCL +KEN++YAS+E  YLSSLL SG DKCPWM+ ESFLTDGVQ+KLLL+TL+H R+AFPGS++LNEAGY+KLPRADV LESLLREGRGVYNIS++  S S+ +D+VVMSADPGQAKVIN+S A +  WA++DPG IL +STC FGDDYRRDTLASRSD+YE FR +   YG AID L NE+KRTSC ATF RYCKSWC NG AL  ETLQ+     R  R RATQ TLAKIADKYMG VG  CRVMLFGKASF AQKG ASAPRKA++REMA+RG+
Sbjct:  408 YIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLANKENSRYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFPGSTQLNEAGYNKLPRADVQLESLLREGRGVYNISSLLDSPSIREDVVVMSADPGQAKVINVSSATARTWARQDPGVILNSSTCVFGDDYRRDTLASRSDKYETFRRKDQPYGVAIDRLRNEKKRTSCLATFIRYCKSWCANGAALLLETLQEARKFLRFDRFRATQKTLAKIADKYMGHVGDPCRVMLFGKASFRAQKGRASAPRKALIREMASRGV 718          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 6.870e-127
Identity = 196/269 (72.86%), Postives = 220/269 (81.78%), Query Frame = 3
Query: 1104 HIDMKTLKYWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTCGFGDDYRRDTLASRSDEYEWFRWRSGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADK 1910
            HIDMKTLK WGL  SNDAWW+ DVLRPFSK AN+KCL +KEN +YAS+E  YLSSLL SG DKCPWM+ ESFLTDGVQ+KLLL+TL H R+AF GSSELNEAGY+KLPRA+  LESLL+EGRGVYNIS++  S S+ +D+VVMSADPGQAKVIN+S A +  WAK+DPG IL TSTC FGDDYRRDTLASRSDEYE FR +   YG AID L NE+KRTSC ATF +YCKSWC NGPALF ETLQ G    R  R RATQ TLAKIAD+
Sbjct:  472 HIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPALFLETLQTGRKFMRFDRFRATQKTLAKIADR 740          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: UPI0000161E53 (EsV-1-178/222 paralog 1 n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E53)

HSP 1 Score: 397 bits (1019), Expect = 5.340e-126
Identity = 194/270 (71.85%), Postives = 217/270 (80.37%), Query Frame = 3
Query: 1104 HIDMKTLKYWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTCGFGDDYRRDTLASRSDEYEWFRWRSGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKY 1913
            +IDMKTL  WGL  SNDAWW+ DVLRPFSK ANVKCL +KEN +YAS+E  YLSSLLESG DKCPWM+ ESFLTDGVQ+KLLL TL+H R+AF GSSELNE GY+KLPRADV LESLL EGRGVYNIS++  S S+ +D+VVMSADPGQAKVIN+S A++  WAK+DPG IL TSTC FGDDYRRDTLASRSDEYE FR +   YG AID LGNE+KRTSC ATF +YC+ WC NGP LF ETLQ G    R  R RATQ TLA IA  Y
Sbjct:  246 YIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEEGYNKLPRADVQLESLLGEGRGVYNISSLLKSTSIREDVVVMSADPGQAKVINVSSAMARTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKFMRFDRFRATQKTLALIAGPY 515          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 1.230e-57
Identity = 104/142 (73.24%), Postives = 122/142 (85.92%), Query Frame = 3
Query: 1134 GLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKV 1559
            GL  SNDAWW+ DVLRPFSK AN+KCL +KEN +YAS+E  YLSSL  SG DKCPWM+ ESFLTDGVQ+KLLL+TL+H R+AF GSSELNEAGY+KLPRAD  LESLL+EGRGVYNIS++  S S+ +D++VMSADPGQAKV
Sbjct:  579 GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLQGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFSGSSELNEAGYNKLPRADAQLESLLKEGRGVYNISSLLESTSIREDVIVMSADPGQAKV 720          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A835YVY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY1_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.370e-44
Identity = 123/333 (36.94%), Postives = 172/333 (51.65%), Query Frame = 3
Query: 1107 IDMKTL-KYWG--LPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQD---------------------KCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTV-NPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTC-GF-GDDYRRDTLASRSDEYEWFRWR-SGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKYMGIVGAACR-VMLFGKASFHAQKGGASAPRKAMVRE 2018
            ID K + K +G  L      WW+ D    FSK AN+ CLR     +YA +E     +L ++ Q                      +CP  V  SFLTDGVQVKL L+T        PG   L +AGY  L      +  ++  GRGVYN+  + + S S  D +++ + DPGQ ++++   A+ E W + +   ++ T+T  GF GD YR DTLA  S+E E  R R +GAYG A+D+L  +R+RTS  A +A YC+ W    P LF E LQ         R+ A Q  +A +AD  + +     R V+ FG ASF A+ G ASAPRK ++RE
Sbjct:  360 IDQKAIRKLFGRALKDCGGPWWYQDFFDVFSKRANIPCLRGSGG-QYARSEHGAFIALKKTQQQAAIRASLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNGGAPGLWGLAKAGYRALGSTPRTMREIIDIGRGVYNVEAITSESLSDLDGVIISAFDPGQVEIVSGVEALGEEWRRPNAAALMSTATRRGFAGDRYREDTLAKLSEEKEEKRRRDNGAYGGALDALTGQRRRTSALAEYAAYCRVWAQESPHLFEELLQDTRRHHTFRRYSAVQRAVAAVADDMVPVEERGKRHVVFFGAASFQAKSGCASAPRKKIIRE 691          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A835ZCL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL1_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.380e-37
Identity = 115/333 (34.53%), Postives = 162/333 (48.65%), Query Frame = 3
Query: 1107 IDMKTL-KYWG--LPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQD---------------------KCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTV-NPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTC-GF-GDDYRRDTLASRSDEYEWFRWR-SGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKYMGIVGAACR-VMLFGKASFHAQKGGASAPRKAMVRE 2018
            ID K + K +G  L      WW+ D    FSK AN+ CLR     +YA +E     +L ++ Q                      +CP  V  SFLTDGVQVKL L+T        PG   L +AGY  L      +  ++  G GVYN+  + + S S  D ++V + DPGQ             W + +   ++ T+T  GF GD Y+  TLA  S++ E  R R + AYG A+D+L  +R+RTS  A +  YC++W    P LF E LQ         R+ + Q  +A +AD  + +     R V+ FG ASF A+ G ASAPRK ++RE
Sbjct:  136 IDQKAIRKLFGCALKDCGGPWWYQDFFDVFSKRANIPCLRGSGG-QYARSEHGAFIALKKTQQQAAIRATLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNGGAPGLWGLAKAGYRALGSMPRTMREIIDIGHGVYNVEAITSESLSDLDGVIVSAFDPGQE------------WRRPNAAALMSTATRRGFAGDRYQDGTLAKLSEQKEEKRRRDNAAYGGALDALTGQRRRTSALAEYTAYCRAWAHESPHLFEELLQDTRRHHAFRRYSSVQRAVAAVADAMVPVEERGKRRVVFFGAASFQAKSGCASAPRKKIIRE 455          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A835Z996_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z996_9STRA)

HSP 1 Score: 146 bits (369), Expect = 8.860e-33
Identity = 103/314 (32.80%), Postives = 152/314 (48.41%), Query Frame = 3
Query: 1107 IDMKTLK--YWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYN-ISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTCG-----FGDDYRRDTLASRSDEYEWFRWRSGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKYMGIVGAACRVMLFGKASFHAQKGGASAPRKAMVREMA 2024
            ID  T+K  +  L      W +S  L P+SK AN++CLR   N+ +  +E+  ++++      +CPW+VA +F TDG Q+KL LLT   T    PG   LN+AGY KL   +VPL+++L  GRGVYN    +       DD+ +   DPG  K IN        W  +D    L   T         DD ++     RS   E        YG+A+ +L   RK++S       YC++W +     + E L+K   + R  R R  Q+ +  I  K    +     +++FG  SF A+KG  S PRK +VR +A
Sbjct:  370 IDKSTMKALFPSLDIQMGPWGYSAFLDPYSKLANIRCLR---NSTWGRSERGMMAAIGNQDMTECPWLVAPTFETDGHQMKLCLLTSDATNGGAPGVRYLNDAGY-KLRTKNVPLQTILDLGRGVYNDTGIIYGGREAVDDVYIGGIDPGIIKPINCIYGTGAAW--RDMKGALTHDTAFEYVVVTEDDIKQMYNRGRSSHNEAVMRSRTPYGQALKTLWKYRKKSSRLQDIIAYCRTWRSVESLYWAEILKKVRKVRRFERFRNIQTQVQNIRKKITTHLQGRRGLLVFGNGSFKAKKGHISVPRKQIVRALA 677          
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A835YIH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIH8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.410e-22
Identity = 82/272 (30.15%), Postives = 132/272 (48.53%), Query Frame = 3
Query: 1107 IDMKTLK--YWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAK-KDPGNILPTSTCGFGDDYRRDTLASRSDEYEWFRWRS--GAYGEAIDSLG-NERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIA 1904
            ID   +K  +  L   +  W +   L P+SK AN++CLR   N+ +   +  +LS++ +    KCPW++A +F TDG Q+KL +++ + TR +  G S L+++GY +L +  V LE+++  G G YN+  V P   + DDL + + +P   K +       + W + + P  +  T T     +     +A  S  Y+    R+  G  G    +   N RKRTS  A F RYC +W     A + E L+    + R  R    QS    IA
Sbjct:   89 IDKAAMKSHFPALDVRSGPWGYLSYLDPYSKSANIRCLR---NSSWGRGKLSFLSAVQDRSVTKCPWLLAPTFETDGRQIKLAMMSSEGTRPSHHGLSTLHKSGY-QLGKDVVSLEAVVNGGAGAYNMRFVTPDERI-DDLYIGAVNPATIKPVQAMFTTGDNWVEARLPEAVGRTGTRFKYYEVTEKDIAKGSRLYKSTTMRTSRGRTGHRTATPSKNFRKRTSVTAEFLRYCGAWRAVEDAYWREILRPTQRIKRFLRFSLVQSQAECIA 355          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
UPI0000161E546.320e-17244.98EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus silicul... [more]
Q6XLT6_9PHYC3.270e-15543.02FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a ... [more]
A0A6H5JA56_9PHAE4.880e-14972.67DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K772_9PHAE6.870e-12772.86DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
UPI0000161E535.340e-12671.85EsV-1-178/222 paralog 1 n=1 Tax=Ectocarpus silicul... [more]
D8LP46_ECTSI1.230e-5773.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVY1_9STRA1.370e-4436.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCL1_9STRA1.380e-3734.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z996_9STRA8.860e-3332.80Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YIH8_9STRA2.410e-2230.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig154contigP-littoralis_Contig154:426969..429236 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2268
Hectar predicted targeting categoryother localisation
Exons1
Cds size1116
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789738.961934-UTR-P-littoralis_Contig154:426968..4281201680789738.961934-UTR-P-littoralis_Contig154:426968..428120Pylaiella littoralis U1_48UTRP-littoralis_Contig154 426969..428120 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789738.9726434-CDS-P-littoralis_Contig154:428120..4292361680789738.9726434-CDS-P-littoralis_Contig154:428120..429236Pylaiella littoralis U1_48CDSP-littoralis_Contig154 428121..429236 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig154.115.1prot_P-littoralis_Contig154.115.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig154 428121..429236 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig154.115.1

>prot_P-littoralis_Contig154.115.1 ID=prot_P-littoralis_Contig154.115.1|Name=mRNA_P-littoralis_Contig154.115.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=372bp
MVVPSSSTNSRVKKKKKKATPPPKVPDFLQTVGSLYPVECRTKDRKLPRK
YKGTYCCQLFARVKLGQHVSKKLRTRTVSVGFRAATSGEKREAFQEKVDE
AVHHLSRERVLASLFANFVFLERLREGSALPEPDRSFFKSCLSSCIISRG
GGSLNEDFDRFSSLTGLKRHDPPKELNLDQQREHEAGCMATSTSTRAEHH
TEKRRTSITKWFLRGRIPRGELENKKYASSLYNLAKAIITEFDGTHEGEQ
NVQERALAIDPAAEADSIITFARREKEFSDRVCGDKTSALRIKHLNWMFN
TYVAESRWRYDEALSRAHAFSPGEDKESSKKRYVFMGSELGEDNAHPPPK
DAAVLPICSTRSVFIHIATLT*
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mRNA from alignment at P-littoralis_Contig154:426969..429236-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig154.115.1 ID=mRNA_P-littoralis_Contig154.115.1|Name=mRNA_P-littoralis_Contig154.115.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2268bp|location=Sequence derived from alignment at P-littoralis_Contig154:426969..429236- (Pylaiella littoralis U1_48)
ATGGTCGTACCATCTTCCTCCACGAACTCACGCGTAAAGAAAAAAAAGAA GAAGGCAACGCCTCCCCCGAAGGTTCCAGATTTCCTACAGACTGTCGGGA GCTTGTACCCGGTCGAGTGCCGCACGAAAGACCGCAAACTCCCTCGTAAA TACAAGGGTACATACTGCTGCCAGCTCTTCGCCAGAGTGAAGCTTGGTCA ACACGTGTCTAAAAAGCTACGGACCAGGACAGTGAGTGTTGGATTTCGAG CGGCAACGTCAGGTGAAAAACGCGAGGCTTTCCAGGAGAAGGTCGACGAG GCGGTACACCATCTTTCCCGTGAAAGGGTATTGGCCTCCCTCTTCGCAAA CTTTGTGTTTTTGGAGCGTCTTCGAGAGGGATCTGCGTTACCAGAGCCGG ACAGGAGCTTCTTCAAGTCTTGCCTGTCGTCATGTATCATCAGCCGGGGA GGCGGTAGCCTAAATGAAGACTTTGATCGGTTTTCCTCGCTGACCGGACT AAAGAGGCACGACCCACCGAAAGAGCTCAACCTTGACCAACAAAGAGAGC ACGAGGCAGGATGTATGGCCACTTCTACGTCCACACGTGCAGAACACCAT ACGGAGAAGAGGAGGACTTCGATCACCAAATGGTTTCTGCGAGGCCGCAT ACCAAGAGGAGAGCTGGAGAACAAGAAATACGCCTCCAGCCTTTACAACC TTGCCAAAGCCATAATAACGGAATTCGACGGCACACATGAGGGAGAACAA AACGTCCAAGAAAGGGCGCTTGCGATAGACCCTGCTGCTGAAGCAGACTC CATCATCACGTTCGCCCGACGTGAGAAGGAGTTTTCTGACCGAGTCTGCG GCGACAAAACGAGCGCACTTAGAATCAAACACTTGAACTGGATGTTCAAC ACGTACGTCGCGGAGTCTCGATGGCGGTACGATGAAGCGTTATCCCGAGC TCACGCGTTCTCACCGGGTGAAGACAAGGAGTCTAGTAAGAAGAGGTACG TTTTCATGGGCAGCGAACTAGGAGAGGACAACGCTCACCCCCCGCCGAAA GACGCAGCTGTGCTACCTATCTGCTCAACCCGTTCTGTTTTCATCCACAT TGCCACATTGACATGAAAACGCTCAAGTATTGGGGGCTTCCGAGTTCCAA CGATGCCTGGTGGTTCAGCGACGTTCTCCGACCCTTCTCGAAGGGGGCAA ATGTCAAGTGTCTTAGGAGCAAGGAGAACACCAAGTACGCGTCGAACGAA CAGCGGTATCTGTCGAGTTTACTGGAAAGTGGCCAGGATAAGTGCCCGTG GATGGTCGCTGAGAGCTTCCTCACAGACGGCGTTCAGGTCAAATTGCTAC TGCTGACCCTTAAGCACACAAGGAGGGCGTTTCCCGGGTCCAGCGAACTC AACGAGGCGGGCTACGACAAGTTACCCCGTGCCGACGTTCCCTTGGAAAG TCTGCTGCGTGAGGGGAGAGGTGTTTACAACATTTCGACTGTCAACCCTT CTGCCAGTGTACCCGACGATCTCGTGGTTATGTCCGCTGACCCTGGTCAG GCGAAGGTTATTAACATTAGTTGAGCCATATCGGAAATATGGGCAAAGAA AGACCCAGGGAATATTCTGCCAACTTCCACATGCGGCTTTGGAGATGATT ACCGCAGGGACACCCTCGCGTCGCGTTCGGACGAGTACGAGTGGTTCAGA TGGAGGAGCGGGGCTTATGGCGAAGCCATCGATAGCCTTGGTAACGAAAG AAAGAGAACCTCGTGTTTCGCTACGTTCGCTCGGTACTGTAAGAGCTGGT GCACTAACGGGCCGGCATTGTTCTATGAGACTCTGCAGAAGGGTAGTAAT CTCTTTCGGCTTGGACGCCACAGGGCTACGCAATCGACTCTAGCAAAGAT AGCGGACAAGTACATGGGCATAGTGGGGGCGGCGTGTAGGGTCATGCTGT TTGGTAAGGCGTCGTTCCATGCCCAAAAGGGGGGAGCGTCTGCCCCAAGA AAGGCCATGGTAAGGGAGATGGCTACCAGAGGTTTGTGTTAATGGTAAGT GAGCAAGCACCTCCAAGAAATGCCCTAGGCGTTTGGGGGATACAGTCGAG GATAAAGAACGGAGAACCCGGAGTTGCAGAAACTTTTCAATCGGGCATCC GGAAGAATCCTGTAGACTTCATCCTCTGACACAAGAGTTTCAAATGGATC GCGACGATTTAGGGTCTACCAACATCGGCATGCGTGGATTTGGGCTCTTG CGTGGTCAGCATTGGTTC
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Coding sequence (CDS) from alignment at P-littoralis_Contig154:426969..429236-

>mRNA_P-littoralis_Contig154.115.1 ID=mRNA_P-littoralis_Contig154.115.1|Name=mRNA_P-littoralis_Contig154.115.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1116bp|location=Sequence derived from alignment at P-littoralis_Contig154:426969..429236- (Pylaiella littoralis U1_48)
ATGGTCGTACCATCTTCCTCCACGAACTCACGCGTAAAGAAAAAAAAGAA
GAAGGCAACGCCTCCCCCGAAGGTTCCAGATTTCCTACAGACTGTCGGGA
GCTTGTACCCGGTCGAGTGCCGCACGAAAGACCGCAAACTCCCTCGTAAA
TACAAGGGTACATACTGCTGCCAGCTCTTCGCCAGAGTGAAGCTTGGTCA
ACACGTGTCTAAAAAGCTACGGACCAGGACAGTGAGTGTTGGATTTCGAG
CGGCAACGTCAGGTGAAAAACGCGAGGCTTTCCAGGAGAAGGTCGACGAG
GCGGTACACCATCTTTCCCGTGAAAGGGTATTGGCCTCCCTCTTCGCAAA
CTTTGTGTTTTTGGAGCGTCTTCGAGAGGGATCTGCGTTACCAGAGCCGG
ACAGGAGCTTCTTCAAGTCTTGCCTGTCGTCATGTATCATCAGCCGGGGA
GGCGGTAGCCTAAATGAAGACTTTGATCGGTTTTCCTCGCTGACCGGACT
AAAGAGGCACGACCCACCGAAAGAGCTCAACCTTGACCAACAAAGAGAGC
ACGAGGCAGGATGTATGGCCACTTCTACGTCCACACGTGCAGAACACCAT
ACGGAGAAGAGGAGGACTTCGATCACCAAATGGTTTCTGCGAGGCCGCAT
ACCAAGAGGAGAGCTGGAGAACAAGAAATACGCCTCCAGCCTTTACAACC
TTGCCAAAGCCATAATAACGGAATTCGACGGCACACATGAGGGAGAACAA
AACGTCCAAGAAAGGGCGCTTGCGATAGACCCTGCTGCTGAAGCAGACTC
CATCATCACGTTCGCCCGACGTGAGAAGGAGTTTTCTGACCGAGTCTGCG
GCGACAAAACGAGCGCACTTAGAATCAAACACTTGAACTGGATGTTCAAC
ACGTACGTCGCGGAGTCTCGATGGCGGTACGATGAAGCGTTATCCCGAGC
TCACGCGTTCTCACCGGGTGAAGACAAGGAGTCTAGTAAGAAGAGGTACG
TTTTCATGGGCAGCGAACTAGGAGAGGACAACGCTCACCCCCCGCCGAAA
GACGCAGCTGTGCTACCTATCTGCTCAACCCGTTCTGTTTTCATCCACAT
TGCCACATTGACATGA
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