mRNA_P-littoralis_Contig154.115.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54) HSP 1 Score: 521 bits (1343), Expect = 6.320e-172 Identity = 363/807 (44.98%), Postives = 442/807 (54.77%), Query Frame = 1
Query: 1 MVVPSSSTNS---RVXXXXXXXXXXXKVPDFLQTVGSLYPVECRTKDRKLPRKYKGTYCCQLFARVKLGQHVSKKLRTRTVSVGFRAATSGEKREAFQEKVDEAVHHLSRERVLASLFANFVFLERLREGSALPEPDRSFFKSCLSSCIISRGGGSLNEDFDRFSSLTGLKRHDPPKELNLDQQREHEAGCMATSTSTRAEHHTEKRRTSITKWFLRGRIPRGELENKKYASSLYNLAKAIITEFDGTHEGEQNVQERALAIDPAAEADSIITFARREKEFSDRVCGDKTSALRIKHLNWMFNTYVAESRWRYDEALSRAHAFSPGEDKESSKKRYVFMGSELGEDNAHPPPKDAAVLPICSTRSVFIHIATLT*K-----------------RSSIGGFRVPTMPGGSATFSDPSRRGQMSSVLGARRTPSTRRTNSGICRVYWKVAR-ISARGWSLRASSQTAFRSNCYC*PLSTQGGR--FPGPANSTRRATTSYPVPTFPWKVCCVRGEVFTTFRLSTLLPVYPTISWLCPLTLVRRRLLTL-VEPYRKYGQRKTQGIFCQLPHAALEMITAGTPSRRVRTSTS--GSDGGAGLMAKPSIALVTKEREPR---VSLRSLGTV--RAGALTG--RHCSMRLCRRVVISFGLDATGLRNRL*QR*RTS--TWA*WGRR----VGSCCLVR------------RRSMPKRGERLPQERPW*GRWLPEVCVNGK*ASTSKKCPRRLGDTVEDKERRTRSCRNFSIGHPEESCRLHPLTQEFQMDRDDLGSTNIGMRGFGLLRGQHWF 2268
MV PSS NS + +P FLQTV SLYP + T LP+ KGTYCCQLF+RV+ G+ VS++LRTRTVSVGFRAAT+ EKR+ FQ KV++AV HLSRERVLASLFANFVF+ERL+ GSALPEPDR+FFKSCLSSCI+SRGGGSLN DFDRFS +TGL R PPK +NLDQQREHEA MAT+TSTRA HH EKRR SIT+WFLRGRI RG+L+ KKYA+ LYNLA+ IIT FDGT E Q ++ + AIDP + + II FA +EKEFSDR GD SA IKHLNWMFNTYVAESR Y+EA+SR+H F+PG+DK KKR FM ELGE+ + PPKD AVLPICST +VFI+I T R V + S G +SS+L SG + W + G ++ +T + GR F G + + P R +V L VY IS L T +R ++ + +P GQ K + A P ++TST G D +A S T R+ + V++ LG R L ++C V+ TG + R R + T A + V C V R S P++ L +E G V + +TSK CP DTVEDKERR RSC+NF IG PEESCRLH LT EF+MDRDD+GSTNIGMRGFG L GQ WF
Sbjct: 1 MVRPSSDGNSHKKKKHKKIPPRAPPKNIPGFLQTVASLYPNQYLTASGNLPKSCKGTYCCQLFSRVRFGKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCILSRGGGSLNADFDRFSEITGLTRLVPPKSMNLDQQREHEAQRMATATSTRATHHAEKRRISITRWFLRGRISRGDLDCKKYATKLYNLAEKIITNFDGTPEDTQKLRTMSRAIDPGTDTNIIIDFAWQEKEFSDRDRGDGKSAETIKHLNWMFNTYVAESRRMYEEAVSRSHLFAPGKDKACRKKRDEFMKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLL-----------ESGPDKCPWMIGESFLTDGVQIKLLLKTL------------EHGRKAFSGSSELNEKGYNKLP-----------RADVQLESLLGEGRGVY-NISSLLKSTSIREDVVVMSADP----GQAKVINV----SSATARTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKFMRFDRFRATQKTLALIADKYMGHVEDTCRVMLFGKASFRAQKGRASAPRKA--LIREMASRG-----VVLMVNEYNTSKMCPGCGEDTVEDKERRIRSCKNFKIGSPEESCRLHRLTPEFEMDRDDVGSTNIGMRGFGKLLGQVWF 757
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC) HSP 1 Score: 479 bits (1232), Expect = 3.270e-155 Identity = 336/781 (43.02%), Postives = 416/781 (53.27%), Query Frame = 1
Query: 70 KVPDFLQTVGSLYPVECRTKDRKLPRKYKGTYCCQLFARVKLGQHVSKKLRTRTVSVGFRAATSGEKREAFQEKVDEAVHHLSRERVLASLFANFVFLERLREGSALPEPDRSFFKSCLSSCIISRGGGSLNEDFDRFSSLTGLKRHDPPKELNLDQQREHEAGCMATSTSTRAEHHTEKRRTSITKWFLRGRIPRGELENKKYASSLYNLAKAIITEFDGTHEGEQNVQERALAIDPAAEADSIITFARREKEFSDRVCGDKTSALRIKHLNWMFNTYVAESRWRYDEALSRAHAFSPGEDKESSKKRYVFMGSELGEDNAHPPPKDAAVLPICSTRSVFIHIATLT*KRSSIGGFR-------------------VPTMPGGSATFSDPSRRGQMSSVLGARRTPSTRRTNSGICRVYWKVAR-ISARGWSLRASSQTAFRSNCYC*PLSTQGGRFPGPANSTRRATTSYPVPTFPWKVCCVRGEVFTTFRLSTLLPVYPTISWLCPLTLVRRRLLTL-VEPYRKYGQRKTQGIFCQLPHAALEMITAGTPSRRVRTSTS--GSDGGAGLMAKPSIALVTKEREPRVSLRSLGTVRAGALTGRHCSMRLCRRVVISFGLDATGLRNRL*QR*RTSTWA*WGRR-----------------VGSCCLVR---RRSMPKRGERLPQERPW*GRWLPEVCVNG-----K*ASTSKKCPRRLGDTVEDKERRTRSCRNFSIGHPEESCRLHPLTQEFQMDRDDLGSTNIGMRGFGLLRGQHWF 2268
K P FL+TVG LYP +C T LPRKYKG+YC QLF+RV+ G VS+KLR RTVSVGF AAT RE FQ KV+EAV HLSRERVLASLF+NFV++ERLR+GS LPEPD FF SCLSSCI S+GG SLN DFDRFSSLTGL R PPK LNL QQR+ EA MATSTSTRA HH+EKRR SIT+WFL RI G K YA+ L+ LAK IIT+F+GT E +Q ++E A A+D + + II FA +EKEFSD ++ A I HL+WMF TYV+ESR +Y+E LSRAH+ PGE+KE SKKR FM ELG + PP+D +VLPICST SVFIH+ T K S G F + + T S +G +SS+L ++G + W V G ++ T L F G + + P P + +G VY IS L +R L+ + +P GQ K + C A E P ++TST G D +A S T R R + + R R + + S+ +++ L N Q+ R + +GR VG C V + S + R R R + E+ G +TSK+CP L DTVEDKERR RSC NF +G PEESCRLHPLT +MDRDD+GSTNIGMRGFG L GQ WF
Sbjct: 37 KKPPFLETVGKLYPQQCLTASGNLPRKYKGSYCAQLFSRVRFGNAVSQKLRRRTVSVGFLAATMDSTRETFQSKVNEAVDHLSRERVLASLFSNFVYMERLRDGSTLPEPDVKFFGSCLSSCIRSKGG-SLNADFDRFSSLTGLSRLVPPKHLNLGQQRQFEANQMATSTSTRATHHSEKRRISITRWFLWERISGGNSRPKDYATKLFILAKKIITDFEGTEEQKQKLREMAKALDSGMDPEPIIEFALKEKEFSDNFSANQKCAPTIAHLDWMFKTYVSESRRKYEEVLSRAHSLFPGEEKEISKKRNEFMKRELGRGDIIAPPRDTSVLPICSTGSVFIHVDMKTLK--SWGLFHSNDAWWYKNVLRPFSREANIKCLRSRENTRYASSEQGYLSSLL-----------DNGPAKCPWFVGESFLTDGVQIKLLLVT----------LEHTRESFSGSSQLNEEGYSKLPRADAPLETLLEKGR-----------GVY-NISSLVESESIRGDLVVMSADP----GQAKVINV-CS---ATSETWEKKDPVAILKTSTCVFGDDYRRETLASHSDEYETLRR--RGTSYGIAIDRLRDEKKRTSCLTTFIQYCRSWCANSSALMNETLQKGRR--FLRFGRHRATQSILARIADRFMGHVGDICRVMLFGKASFSAKKGRASAPRK---RLIREMAARGVVLMVNEYNTSKQCPGCLEDTVEDKERRIRSCINFKVGSPEESCRLHPLTPVLEMDRDDVGSTNIGMRGFGQLLGQKWF 766
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE) HSP 1 Score: 464 bits (1193), Expect = 4.880e-149 Identity = 226/311 (72.67%), Postives = 259/311 (83.28%), Query Frame = 3
Query: 1104 HIDMKTLKYWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTCGFGDDYRRDTLASRSDEYEWFRWRSGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKYMGIVGAACRVMLFGKASFHAQKGGASAPRKAMVREMATRGL 2036
+IDMKTLK WGL SNDAWW+ DVLRPFSK AN+KCL +KEN++YAS+E YLSSLL SG DKCPWM+ ESFLTDGVQ+KLLL+TL+H R+AFPGS++LNEAGY+KLPRADV LESLLREGRGVYNIS++ S S+ +D+VVMSADPGQAKVIN+S A + WA++DPG IL +STC FGDDYRRDTLASRSD+YE FR + YG AID L NE+KRTSC ATF RYCKSWC NG AL ETLQ+ R R RATQ TLAKIADKYMG VG CRVMLFGKASF AQKG ASAPRKA++REMA+RG+
Sbjct: 408 YIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLANKENSRYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFPGSTQLNEAGYNKLPRADVQLESLLREGRGVYNISSLLDSPSIREDVVVMSADPGQAKVINVSSATARTWARQDPGVILNSSTCVFGDDYRRDTLASRSDKYETFRRKDQPYGVAIDRLRNEKKRTSCLATFIRYCKSWCANGAALLLETLQEARKFLRFDRFRATQKTLAKIADKYMGHVGDPCRVMLFGKASFRAQKGRASAPRKALIREMASRGV 718
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE) HSP 1 Score: 405 bits (1040), Expect = 6.870e-127 Identity = 196/269 (72.86%), Postives = 220/269 (81.78%), Query Frame = 3
Query: 1104 HIDMKTLKYWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTCGFGDDYRRDTLASRSDEYEWFRWRSGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADK 1910
HIDMKTLK WGL SNDAWW+ DVLRPFSK AN+KCL +KEN +YAS+E YLSSLL SG DKCPWM+ ESFLTDGVQ+KLLL+TL H R+AF GSSELNEAGY+KLPRA+ LESLL+EGRGVYNIS++ S S+ +D+VVMSADPGQAKVIN+S A + WAK+DPG IL TSTC FGDDYRRDTLASRSDEYE FR + YG AID L NE+KRTSC ATF +YCKSWC NGPALF ETLQ G R R RATQ TLAKIAD+
Sbjct: 472 HIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRTSCLATFIQYCKSWCANGPALFLETLQTGRKFMRFDRFRATQKTLAKIADR 740
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: UPI0000161E53 (EsV-1-178/222 paralog 1 n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E53) HSP 1 Score: 397 bits (1019), Expect = 5.340e-126 Identity = 194/270 (71.85%), Postives = 217/270 (80.37%), Query Frame = 3
Query: 1104 HIDMKTLKYWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTCGFGDDYRRDTLASRSDEYEWFRWRSGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKY 1913
+IDMKTL WGL SNDAWW+ DVLRPFSK ANVKCL +KEN +YAS+E YLSSLLESG DKCPWM+ ESFLTDGVQ+KLLL TL+H R+AF GSSELNE GY+KLPRADV LESLL EGRGVYNIS++ S S+ +D+VVMSADPGQAKVIN+S A++ WAK+DPG IL TSTC FGDDYRRDTLASRSDEYE FR + YG AID LGNE+KRTSC ATF +YC+ WC NGP LF ETLQ G R R RATQ TLA IA Y
Sbjct: 246 YIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEEGYNKLPRADVQLESLLGEGRGVYNISSLLKSTSIREDVVVMSADPGQAKVINVSSAMARTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKFMRFDRFRATQKTLALIAGPY 515
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI) HSP 1 Score: 219 bits (558), Expect = 1.230e-57 Identity = 104/142 (73.24%), Postives = 122/142 (85.92%), Query Frame = 3
Query: 1134 GLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKV 1559
GL SNDAWW+ DVLRPFSK AN+KCL +KEN +YAS+E YLSSL SG DKCPWM+ ESFLTDGVQ+KLLL+TL+H R+AF GSSELNEAGY+KLPRAD LESLL+EGRGVYNIS++ S S+ +D++VMSADPGQAKV
Sbjct: 579 GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLQGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFSGSSELNEAGYNKLPRADAQLESLLKEGRGVYNISSLLESTSIREDVIVMSADPGQAKV 720
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A835YVY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY1_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.370e-44 Identity = 123/333 (36.94%), Postives = 172/333 (51.65%), Query Frame = 3
Query: 1107 IDMKTL-KYWG--LPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQD---------------------KCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTV-NPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTC-GF-GDDYRRDTLASRSDEYEWFRWR-SGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKYMGIVGAACR-VMLFGKASFHAQKGGASAPRKAMVRE 2018
ID K + K +G L WW+ D FSK AN+ CLR +YA +E +L ++ Q +CP V SFLTDGVQVKL L+T PG L +AGY L + ++ GRGVYN+ + + S S D +++ + DPGQ ++++ A+ E W + + ++ T+T GF GD YR DTLA S+E E R R +GAYG A+D+L +R+RTS A +A YC+ W P LF E LQ R+ A Q +A +AD + + R V+ FG ASF A+ G ASAPRK ++RE
Sbjct: 360 IDQKAIRKLFGRALKDCGGPWWYQDFFDVFSKRANIPCLRGSGG-QYARSEHGAFIALKKTQQQAAIRASLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNGGAPGLWGLAKAGYRALGSTPRTMREIIDIGRGVYNVEAITSESLSDLDGVIISAFDPGQVEIVSGVEALGEEWRRPNAAALMSTATRRGFAGDRYREDTLAKLSEEKEEKRRRDNGAYGGALDALTGQRRRTSALAEYAAYCRVWAQESPHLFEELLQDTRRHHTFRRYSAVQRAVAAVADDMVPVEERGKRHVVFFGAASFQAKSGCASAPRKKIIRE 691
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A835ZCL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL1_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.380e-37 Identity = 115/333 (34.53%), Postives = 162/333 (48.65%), Query Frame = 3
Query: 1107 IDMKTL-KYWG--LPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQD---------------------KCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTV-NPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTC-GF-GDDYRRDTLASRSDEYEWFRWR-SGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKYMGIVGAACR-VMLFGKASFHAQKGGASAPRKAMVRE 2018
ID K + K +G L WW+ D FSK AN+ CLR +YA +E +L ++ Q +CP V SFLTDGVQVKL L+T PG L +AGY L + ++ G GVYN+ + + S S D ++V + DPGQ W + + ++ T+T GF GD Y+ TLA S++ E R R + AYG A+D+L +R+RTS A + YC++W P LF E LQ R+ + Q +A +AD + + R V+ FG ASF A+ G ASAPRK ++RE
Sbjct: 136 IDQKAIRKLFGCALKDCGGPWWYQDFFDVFSKRANIPCLRGSGG-QYARSEHGAFIALKKTQQQAAIRATLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNGGAPGLWGLAKAGYRALGSMPRTMREIIDIGHGVYNVEAITSESLSDLDGVIVSAFDPGQE------------WRRPNAAALMSTATRRGFAGDRYQDGTLAKLSEQKEEKRRRDNAAYGGALDALTGQRRRTSALAEYTAYCRAWAHESPHLFEELLQDTRRHHAFRRYSSVQRAVAAVADAMVPVEERGKRRVVFFGAASFQAKSGCASAPRKKIIRE 455
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A835Z996_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z996_9STRA) HSP 1 Score: 146 bits (369), Expect = 8.860e-33 Identity = 103/314 (32.80%), Postives = 152/314 (48.41%), Query Frame = 3
Query: 1107 IDMKTLK--YWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYN-ISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAKKDPGNILPTSTCG-----FGDDYRRDTLASRSDEYEWFRWRSGAYGEAIDSLGNERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIADKYMGIVGAACRVMLFGKASFHAQKGGASAPRKAMVREMA 2024
ID T+K + L W +S L P+SK AN++CLR N+ + +E+ ++++ +CPW+VA +F TDG Q+KL LLT T PG LN+AGY KL +VPL+++L GRGVYN + DD+ + DPG K IN W +D L T DD ++ RS E YG+A+ +L RK++S YC++W + + E L+K + R R R Q+ + I K + +++FG SF A+KG S PRK +VR +A
Sbjct: 370 IDKSTMKALFPSLDIQMGPWGYSAFLDPYSKLANIRCLR---NSTWGRSERGMMAAIGNQDMTECPWLVAPTFETDGHQMKLCLLTSDATNGGAPGVRYLNDAGY-KLRTKNVPLQTILDLGRGVYNDTGIIYGGREAVDDVYIGGIDPGIIKPINCIYGTGAAW--RDMKGALTHDTAFEYVVVTEDDIKQMYNRGRSSHNEAVMRSRTPYGQALKTLWKYRKKSSRLQDIIAYCRTWRSVESLYWAEILKKVRKVRRFERFRNIQTQVQNIRKKITTHLQGRRGLLVFGNGSFKAKKGHISVPRKQIVRALA 677
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Match: A0A835YIH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIH8_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.410e-22 Identity = 82/272 (30.15%), Postives = 132/272 (48.53%), Query Frame = 3
Query: 1107 IDMKTLK--YWGLPSSNDAWWFSDVLRPFSKGANVKCLRSKENTKYASNEQRYLSSLLESGQDKCPWMVAESFLTDGVQVKLLLLTLKHTRRAFPGSSELNEAGYDKLPRADVPLESLLREGRGVYNISTVNPSASVPDDLVVMSADPGQAKVINIS*AISEIWAK-KDPGNILPTSTCGFGDDYRRDTLASRSDEYEWFRWRS--GAYGEAIDSLG-NERKRTSCFATFARYCKSWCTNGPALFYETLQKGSNLFRLGRHRATQSTLAKIA 1904
ID +K + L + W + L P+SK AN++CLR N+ + + +LS++ + KCPW++A +F TDG Q+KL +++ + TR + G S L+++GY +L + V LE+++ G G YN+ V P + DDL + + +P K + + W + + P + T T + +A S Y+ R+ G G + N RKRTS A F RYC +W A + E L+ + R R QS IA
Sbjct: 89 IDKAAMKSHFPALDVRSGPWGYLSYLDPYSKSANIRCLR---NSSWGRGKLSFLSAVQDRSVTKCPWLLAPTFETDGRQIKLAMMSSEGTRPSHHGLSTLHKSGY-QLGKDVVSLEAVVNGGAGAYNMRFVTPDERI-DDLYIGAVNPATIKPVQAMFTTGDNWVEARLPEAVGRTGTRFKYYEVTEKDIAKGSRLYKSTTMRTSRGRTGHRTATPSKNFRKRTSVTAEFLRYCGAWRAVEDAYWREILRPTQRIKRFLRFSLVQSQAECIA 355 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig154.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig154.115.1 >prot_P-littoralis_Contig154.115.1 ID=prot_P-littoralis_Contig154.115.1|Name=mRNA_P-littoralis_Contig154.115.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=372bp MVVPSSSTNSRVKKKKKKATPPPKVPDFLQTVGSLYPVECRTKDRKLPRKback to top mRNA from alignment at P-littoralis_Contig154:426969..429236- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig154.115.1 ID=mRNA_P-littoralis_Contig154.115.1|Name=mRNA_P-littoralis_Contig154.115.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2268bp|location=Sequence derived from alignment at P-littoralis_Contig154:426969..429236- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig154:426969..429236- >mRNA_P-littoralis_Contig154.115.1 ID=mRNA_P-littoralis_Contig154.115.1|Name=mRNA_P-littoralis_Contig154.115.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1116bp|location=Sequence derived from alignment at P-littoralis_Contig154:426969..429236- (Pylaiella littoralis U1_48)back to top |