mRNA_P-littoralis_Contig154.104.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig154.104.1 vs. uniprot
Match: Q6XM26_9PHYC (FirrV-1-B10 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM26_9PHYC) HSP 1 Score: 220 bits (560), Expect = 7.290e-69 Identity = 100/215 (46.51%), Postives = 144/215 (66.98%), Query Frame = 1
Query: 1 QFGNMTTVHFGDVDLSQLRLAPARA*KSSPGFRSSYIQHKSGQRLSIQTPVMKLPWDIKPKQMDDGSNVSTQLALSFSGVNPVDEDCDLNRFMCFMKAFDARIKELVVNMNGGLDKKSEVKVHDAKFCDSVKESGSGDYPPTIQPKIWLRCRDGGSSKCVEDHNMDIAVYDIEKEMIDPENLSKGCMAAAIIEPNTAWCSSMGVGVTWVAKQAVV 645
Q M HF + D+S L+L+P + K++ G +++YI +++IQTP+M LPWDI PK++DD SNV +L+LSF G+N D + +L +F F+ FD +IK L+ +G + K SE +A F DS+KES +G+YPPTIQ KIWL + GGS VED +MD+ V+D+E I + + KGC AAAI+EP+ WCS++GVG+TWVAKQ +
Sbjct: 9 QHPTMAATHFSEFDVSTLKLSPPKTSKANVGCKTAYITAVGSVKIAIQTPIMTLPWDIVPKKLDDVSNVRAELSLSFVGINEDDPENELKKFKDFLSTFDQKIKTLISETHGAMGKNSEDTRLEASFRDSIKESATGNYPPTIQSKIWLNLKQGGSPSIVEDFDMDVMVFDLEGCQIQTDQMQKGCPAAAILEPSYVWCSALGVGITWVAKQVAL 223
BLAST of mRNA_P-littoralis_Contig154.104.1 vs. uniprot
Match: Q6XLU5_9PHYC (FirrV-1-I1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLU5_9PHYC) HSP 1 Score: 210 bits (535), Expect = 2.870e-65 Identity = 96/206 (46.60%), Postives = 140/206 (67.96%), Query Frame = 1
Query: 28 FGDVDLSQLRLAPARA*KSSPGFRSSYIQHKSGQRLSIQTPVMKLPWDIKPKQMDDGSNVSTQLALSFSGVNPVDEDCDLNRFMCFMKAFDARIKELVVNMNGGLDKKSEVKVHDAKFCDSVKESGSGDYPPTIQPKIWLRCRDGGSSKCVEDHNMDIAVYDIEKEMIDPENLSKGCMAAAIIEPNTAWCSSMGVGVTWVAKQAVV 645
F D D+S ++L+P + K++ G +++Y+ +++IQTPVM LPWDI PK+MDD SNV +L+LSF G++ D D +L +F F++ FD R+K L+ NG + K SE F ++KES +G+YPPTIQ KIWL + GGS VED +MD+ V+D++ I+ + + KGC AAAI+EP+ WCS++GVG+TWVAKQ V
Sbjct: 7 FYDFDISTVKLSPPKTSKANSGCKTAYLTTTGSMKIAIQTPVMTLPWDIVPKKMDDVSNVRGELSLSFVGMDERDADNELCQFKTFVEHFDERVKALISETNGAMGKNSEETRLGTNFRPTIKESATGNYPPTIQSKIWLNLKQGGSPSSVEDFDMDVMVFDMDGSRINTDQMQKGCPAAAILEPSYVWCSALGVGITWVAKQVAV 212
BLAST of mRNA_P-littoralis_Contig154.104.1 vs. uniprot
Match: B5LWA7_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWA7_9PHYC) HSP 1 Score: 209 bits (531), Expect = 1.230e-64 Identity = 96/206 (46.60%), Postives = 135/206 (65.53%), Query Frame = 1
Query: 28 FGDVDLSQLRLAPARA*KSSPGFRSSYIQHKSGQRLSIQTPVMKLPWDIKPKQMDDGSNVSTQLALSFSGVNPVDEDCDLNRFMCFMKAFDARIKELVVNMNGGLDKKSEVKVHDAKFCDSVKESGSGDYPPTIQPKIWLRCRDGGSSKCVEDHNMDIAVYDIEKEMIDPENLSKGCMAAAIIEPNTAWCSSMGVGVTWVAKQAVV 645
+ D D+S L+L+ A+ K++ G +++YI ++IQTP+M LPWDI PK++DD SNV +LALSF +N D D ++ +F F+ FD +IK LV M G L K SE DA F S+K+S SG+YPPT Q KIWL + GG+ CV+D MD+ V+D+ + P + KGC AAAII P+ WCS++G+G+TWVAKQ +
Sbjct: 5 YADFDISTLKLSQAKTSKANSGCKTAYISAIGCANIAIQTPLMTLPWDIVPKKLDDTSNVRAELALSFMNINEYDPDNEILKFRNFLTDFDIKIKTLVAEMKGVLGKNSEDARLDASFRSSIKDSTSGEYPPTFQSKIWLSLKQGGAPSCVDDFEMDVMVFDMNGAQLSPTEMRKGCPAAAIIVPSYVWCSALGLGITWVAKQVAI 210
BLAST of mRNA_P-littoralis_Contig154.104.1 vs. uniprot
Match: A0A2P6MVC7_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MVC7_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 1.320e-7 Identity = 47/174 (27.01%), Postives = 84/174 (48.28%), Query Frame = 1
Query: 130 RLSIQTPVMKLPWDIKPKQMDDGSNVSTQLALSFSGVNPVDEDCDLNRFMCFMKAFDARIKELVVNMNGGL-----DKKSEVKVHDAKFCDSVKESGSGDYPPTIQPKIWLRCRDGGSSKCVEDHNMDIAVYDIEKEMIDPENLSKGCMAAAIIEPNTAWCSSMGVGVTWVAKQ 636
RL IQTP++++P+DI +G ++ LAL G N ++ +F+ ++ D ++K+ +VN + L KK++ K+ +K+ +KES +Y P + I + DG + VY + EN++KG AI+EP + + VG++W Q
Sbjct: 123 RLRIQTPILRVPFDIGTNPESEGRKMNLALALDDIGSNE-----EVAKFLNVVQQIDQKVKDHLVNNSQSLLMTPDPKKAQDKL--SKYFSCIKESQ--EYSPLFKAAIPIY--DGEPAT---------RVYLDSEVQGSVENVTKGSRVVAIVEPKSIYMIGPNVGLSWRVSQ 276 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig154.104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig154.104.1 >prot_P-littoralis_Contig154.104.1 ID=prot_P-littoralis_Contig154.104.1|Name=mRNA_P-littoralis_Contig154.104.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=165bp MKLPWDIKPKQMDDGSNVSTQLALSFSGVNPVDEDCDLNRFMCFMKAFDAback to top mRNA from alignment at P-littoralis_Contig154:382149..382796- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig154.104.1 ID=mRNA_P-littoralis_Contig154.104.1|Name=mRNA_P-littoralis_Contig154.104.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=648bp|location=Sequence derived from alignment at P-littoralis_Contig154:382149..382796- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig154:382149..382796- >mRNA_P-littoralis_Contig154.104.1 ID=mRNA_P-littoralis_Contig154.104.1|Name=mRNA_P-littoralis_Contig154.104.1|organism=Pylaiella littoralis U1_48|type=CDS|length=495bp|location=Sequence derived from alignment at P-littoralis_Contig154:382149..382796- (Pylaiella littoralis U1_48)back to top |