mRNA_P-littoralis_Contig153.37.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig153.37.2
Unique NamemRNA_P-littoralis_Contig153.37.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 3.450e-53
Identity = 120/284 (42.25%), Postives = 155/284 (54.58%), Query Frame = 1
Query:    4 AWYYRFLKRHRFSIRRKTRVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 687
            +WY RF KR++FSIRR+T VGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q E P +TT+E TG K A I TGG+ EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGL P+ QPLDR +NK+ KR +R  YT+
Sbjct:  187 SWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTA 468          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 1.170e-44
Identity = 97/224 (43.30%), Postives = 134/224 (59.82%), Query Frame = 1
Query:  154 IFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 744
            +F  L NMDQTP+Q E P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF+                               +PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E +   L   A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG
Sbjct:  113 VFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERG 334          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.260e-44
Identity = 97/236 (41.10%), Postives = 135/236 (57.20%), Query Frame = 1
Query:  112 QKLRSSLREHAQEAIFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKVTAPSRG 744
            + L S      +  +F  L NMDQTP+Q E P +TT+EKTG K A ++TGGE EK R+T+VLAV  DG+KV  RII+ G PF+  T +                         G+PA G+S GVQ+ SW D  + + W +  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R++YT++          K+  P RG
Sbjct:   33 EDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGE-EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERG 267          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 2.750e-44
Identity = 91/218 (41.74%), Postives = 124/218 (56.88%), Query Frame = 1
Query:  112 QKLRSSLREHAQEAIFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG------------------------GTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 690
            + L S   E     +F  L NMDQTP+Q E P +T++EKTG K A I TGG+ EK R+T+ LAV GD +KV  R I+KG P +                           +  GYP GG+S GVQ+ SWCD  +   W+   +  RP + S   QRP +LVLDDF+CH+++ F  +L   A T+V+ + GGLTP+ QPLDR +NK  KR +R  YT++
Sbjct:   37 EDLTSEQLESVTAEVFVELGNMDQTPVQHEMPVETSLEKTGAKDARIATGGK-EKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 4.160e-44
Identity = 101/238 (42.44%), Postives = 138/238 (57.98%), Query Frame = 1
Query:  112 QKLRSSLREHAQEAIFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 744
            + L S      +  +F  L NMDQTP+Q E P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG
Sbjct:   99 EDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERG 334          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5KKC9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC9_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 6.260e-44
Identity = 106/275 (38.55%), Postives = 142/275 (51.64%), Query Frame = 1
Query:   40 SIRRKTRVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQK-VRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIR 696
            SIRR+T VGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q E P +TT+EKTG K A I+TGG   +          G  QK V PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+   GGLTP+ QPLDR +NK+ KR +R    S +R
Sbjct:  108 SIRRRTSVGQKLPQGYEGMAWATVMKLREALVKRAGEIYARRHPPVPDKSPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGGQREGTLHARSGCHGGRQKNVSPRIIFQGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFTPGGLTPLLQPLDRTLNKQMKRLLRGNVGSSLR 382          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.920e-43
Identity = 98/238 (41.18%), Postives = 137/238 (57.56%), Query Frame = 1
Query:  112 QKLRSSLREHAQEAIFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 744
            + L S      +  +F  + NMDQ P+Q E P +TT++KTG K A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH +E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG
Sbjct:  293 EDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERG 529          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 6.710e-41
Identity = 104/276 (37.68%), Postives = 136/276 (49.28%), Query Frame = 1
Query:    4 AWYYRFLKRHRFSIRRKTRVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKR 663
            +WY RF KR++F+IRR+T VGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q E+                   G  EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P  G+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGLTP+ Q LDR +NK+ KR
Sbjct:  174 SWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERD-----------------AGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKR 431          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.330e-39
Identity = 91/217 (41.94%), Postives = 126/217 (58.06%), Query Frame = 1
Query:  175 MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRG 744
            MDQTP+Q E P +TT+EKTG K A I+TGG+ E+ R+ +VLAV  DG+KV PRI +KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+ H++E F   L   A T+V+ + GGLTP+ QPLD  +NK+ KR +R +Y ++        RSG K+  P RG
Sbjct:    1 MDQTPVQHEMPVETTLEKTGAKDARISTGGK-EQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSG-KLKPPERG 215          
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 2.030e-39
Identity = 92/205 (44.88%), Postives = 116/205 (56.59%), Query Frame = 1
Query:  136 EHAQEAIFALLYNMDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVR 672
            E     +F  L NMDQTP+Q E P +TT+EK G K A I+TGG+ EK R+T  LAV  DG KV  RII+KG PF+                             FGYP  G+   VQ+ SWCD  +   W+++ +  RP  GS  + QR S+LVLDDFRCHR E F K L     T V+++ GGLTP+ QPLDR +NKE KR +R
Sbjct:  176 ESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMR 378          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.37.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8Y4_9PHAE3.450e-5342.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE1.170e-4443.30DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE2.260e-4441.10DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FXD3_ECTSI2.750e-4441.74DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE4.160e-4442.44DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KKC9_9PHAE6.260e-4438.55DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.920e-4341.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE8_9PHAE6.710e-4137.68DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KT06_9PHAE1.330e-3941.94DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE2.030e-3944.88Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig153contigP-littoralis_Contig153:114917..116459 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size851
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.5e-43
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size588
COG categoryCH
BRITEko00000,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig153.37.2prot_P-littoralis_Contig153.37.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig153 115196..116370 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789731.5351918-UTR-P-littoralis_Contig153:114916..1150691680789731.5351918-UTR-P-littoralis_Contig153:114916..115069Pylaiella littoralis U1_48UTRP-littoralis_Contig153 114917..115069 +
1680789731.5484388-UTR-P-littoralis_Contig153:115174..1151951680789731.5484388-UTR-P-littoralis_Contig153:115174..115195Pylaiella littoralis U1_48UTRP-littoralis_Contig153 115175..115195 +
1680789731.587974-UTR-P-littoralis_Contig153:116370..1164591680789731.587974-UTR-P-littoralis_Contig153:116370..116459Pylaiella littoralis U1_48UTRP-littoralis_Contig153 116371..116459 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789731.5577369-CDS-P-littoralis_Contig153:115195..1152911680789731.5577369-CDS-P-littoralis_Contig153:115195..115291Pylaiella littoralis U1_48CDSP-littoralis_Contig153 115196..115291 +
1680789731.5690742-CDS-P-littoralis_Contig153:115809..1159131680789731.5690742-CDS-P-littoralis_Contig153:115809..115913Pylaiella littoralis U1_48CDSP-littoralis_Contig153 115810..115913 +
1680789731.5791302-CDS-P-littoralis_Contig153:115982..1163701680789731.5791302-CDS-P-littoralis_Contig153:115982..116370Pylaiella littoralis U1_48CDSP-littoralis_Contig153 115983..116370 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig153.37.2

>prot_P-littoralis_Contig153.37.2 ID=prot_P-littoralis_Contig153.37.2|Name=mRNA_P-littoralis_Contig153.37.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp
MDQTPIQAEKPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKV
RPRIIYKGNPFVGGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMR
RPGSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVC
QPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKVTAPSRGWSRRG*
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mRNA from alignment at P-littoralis_Contig153:114917..116459+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig153.37.2 ID=mRNA_P-littoralis_Contig153.37.2|Name=mRNA_P-littoralis_Contig153.37.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1543bp|location=Sequence derived from alignment at P-littoralis_Contig153:114917..116459+ (Pylaiella littoralis U1_48)
AACGCCTGGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATCCGACG CAAGACGAGAGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAAGGCGT GGGCATTCATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGCAGGAA GCCGTTCTCTTGGAGAGGGCAGCCCAGGCAGCGAAGGACGGAGGGACCGT TGAGATCGAGATGGACGTCATCGCAACTGCGGAGGAACTTCTGGCTGTTC AGGGCAAGATCTTCGCCCTTCTGTACAACATGGACCAGACCCCGATCCAG GCTGAGAAGCCGCCGGACACCACGGTGGAGAAGACTGGTACGAAGAGCGC TTGCATCACGACAGGAGGTGAGACGGTGTACTAAAGGTATTTCGATTGTT GAAATTCAGTTCAAACCAACATGGTGGAGATTTTCTGACGATGGAACAAG CGGGGAATTACAAATTTGCCGACGGCGGAAAAACGGGGAATTATAATATT TTGCATTGCTTCTGCCGTCACGTGCACGCTTTCGTTCTTCTATTGCCTGC AAGTACGGTACGTACTGCTGTATCGCCTGTCCCTTCGAACTACCGGTACA CAGCGATGAAATTATTCATATGGTATTCCGCTGAAGTATTTTTTTTAATA TACATATGTTTTGGGGGCAATATATATTTTACCGTATACACCGGAGTTTG TTTTATTTTACTTTTTATGTTGTGGTAGGCATTACACCCCAGGAGTTAAA GGTGTGTGTTTGTTTTTTACTATTATTTATTTTTTGTTTGTTGTGGCAGG CAATACGATTAATAATTGTACTGCTTTGCGGAGTATTTTCTTTTAACACA ATTTCCTTTGTTTGCATACGCCCCAATTTTCGCACCAGGCAAGGAGAAGC TGCGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGGTGCGG CCGCGCATCATCTACAAGGGGAACCCTTTTGTCGGGGGTACCAACAAGTC AGGCTCAGCCAAGAAGCCTGGCAAGAACAGCCTGTCGTACGAGCACCTCC CAGACAAGCGGACGAGCTTCGGCTACCCGGCTGGCGGCATCAGCCTCGGG GTGCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGTGGGTAAC CCAGGACTTCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCGTCCCA GCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGAGGTTCCAA AAGAAGCTAATGGACCTGGCCAAGACGCTGGTGGTGATGCTTGGTGGAGG GCTGACCCCGGTGTGCCAGCCGCTCGACCGGAACATCAACAAGGAGTTCA AGCGAGGTGTTCGGGCCAGGTACACCAGCTGGATCCGGGACAACTACGGG CGCTCGGGGCAGAAGGTGACCGCGCCGAGCAGGGGCTGGTCGCGACGTGG GTAAAGGAGGTGTGGGACAACATCTCGGAGCGGACCATCCGCTCGTGCTT CAAGGTCTGCGGTCTCACCCTCAACCTCGACGGAAGCGAGGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig153:114917..116459+

>mRNA_P-littoralis_Contig153.37.2 ID=mRNA_P-littoralis_Contig153.37.2|Name=mRNA_P-littoralis_Contig153.37.2|organism=Pylaiella littoralis U1_48|type=CDS|length=588bp|location=Sequence derived from alignment at P-littoralis_Contig153:114917..116459+ (Pylaiella littoralis U1_48)
ATGGACCAGACCCCGATCCAGGCTGAGAAGCCGCCGGACACCACGGTGGA
GAAGACTGGTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGGAGA
AGCTGCGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGGTG
CGGCCGCGCATCATCTACAAGGGGAACCCTTTTGTCGGGGGTACCAACAA
CTTCGGCTACCCGGCTGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGT
GGTGCGACGGCACCCAGTCCGACGAGTGGGTAACCCAGGACTTCATGCGC
CGCCCAGGGTCTACCTCCAGAGATCAGCGTCCCAGCGTTCTCGTGCTCGA
CGACTTCAGGTGCCACCGGGAAGAGAGGTTCCAAAAGAAGCTAATGGACC
TGGCCAAGACGCTGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGC
CAGCCGCTCGACCGGAACATCAACAAGGAGTTCAAGCGAGGTGTTCGGGC
CAGGTACACCAGCTGGATCCGGGACAACTACGGGCGCTCGGGGCAGAAGG
TGACCGCGCCGAGCAGGGGCTGGTCGCGACGTGGGTAA
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