mRNA_P-littoralis_Contig1518.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1518.2.1
Unique NamemRNA_P-littoralis_Contig1518.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 1051 bits (2718), Expect = 0.000e+0
Identity = 536/857 (62.54%), Postives = 648/857 (75.61%), Query Frame = 1
Query:    1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAAT------------------------------------PAGF-------------PVADGIGEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELP 2424
            +R LR ++P DSI+LMGDFNR+R  V++W       I+V EL  KDA+LGTR+HGSKR IDH+++ +AHP+D LR PRV+RKVDISDHYP+VSTFRSDRADA+T                                    P G              P+AD I EG  +L   D  A+ DAAA+RMV+ + QVA+    TK    +R PALK  IARAIDDRG++YR A++ R +      AW  Y E +  AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+  GLQPV+HPD+  L+T A DISA+W+THY+RLA+DVTGNSR  D+W  W AAPQR H+  LD PI   E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN  FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP  GN +ER  R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG   RRL   PDRWKLAG  LPIV  YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+   A VS+VALWREL+IPPICASAAARRAR +QKAS +KTW+A+++  P+KHR+WTW TGT RWMNRY HRLA    D+LP
Sbjct:  137 MRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYESIRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADASTGDSVGVPINARTIQRGERINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLP 993          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 425 bits (1093), Expect = 3.040e-127
Identity = 300/868 (34.56%), Postives = 445/868 (51.27%), Query Frame = 1
Query:    1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAEL---GTREHGSKRTIDHMVSMMAHPEDHLRRPRVI---RKVDISDHYPLVSTF--------------------------RSDRADAATPAGFPVADGI-----------------GEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRR-ARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLA 2400
            L +LRE+FP+D+IV+ GD+N    ++D  LRR         +  +DA     GT   GS R IDH V+        L  P  +      D SDH+P+ ++                           +  R D  +    P  D +                 G    + D +D  A AD     +  TA +V     V++ R     P L+ SI  AI  R   +    ++ RG    ++ A   Y   +   + +VR +RR+   +A+  A    R     + FWK++  +A      +    QPV  P +GVL T   +I+A W  HY  L  D      R+      W       P  P L  ++ PI   EL +AL RL  +KASG DG+ A+ LKLA      +SP  K+LL ++N +W  + +P++W  S VVSI KKGDV  M+NYRGIS+M  ++K+L+ +++ RL +  + + L    Q GF   EEC  Q A + +IA RR+     T+  F+DL+KAYDT+PHE LF+KL+  G+ G+ML F++ LY +S + V+TG+   + S+   ++RG+RQGCP SP+LFNIFINDI DG E LG  V G     +  +  RV G LFADD V +A + + L  +    ++W +++ M  G+ KCGVMA+G  +    L    DRW+L G  +P+V EY YLG + N  L +  ++G+++    R V A+   L  R IP+ +R +V++  ILP L +G EV+GM      +R+Q  +N+  R + GVGA A  V+   L REL I PI A AAA R RA  KA ++ T ++ +V  P + R  TW +GT RW++R+    A
Sbjct:   33 LAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVFASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSID--ADADGFVQAVWSTARRVGA---VSRTRRKSLGPPLQRSILGAIARRRHAFLALCQEARGPI--QSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASA 891          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 406 bits (1043), Expect = 2.970e-117
Identity = 268/752 (35.64%), Postives = 391/752 (51.99%), Query Frame = 1
Query:  367 ELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAA-----------------YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSRSRT 2451
            E D     D AA R+V T  +VA+   +  L++   +P    S   A    G+    + +TR   A + A +                   Y  T+  A+  VR++ R +W K +Q     +R D K  W++                 S  AG+    +       QP+KHP +  ++T   +I+ +W  ++  LA D TG+      W +  ++ P  P L  L+ P+   E+  ALL +K  KA G DG+ ADFLKL  G       D G ++      PMA  L  +L  MW  + +P  W  + VV I K +GD  +M NYRGISL+  VLK+L  II+ RL    ++  N   H  QAGFR +EEC+     L E+ +RR++ +  ++L F+DLKKAYDTVPH ALF KL+  GVRG  L FI+ LY +S +S R             L+RG+RQGCP+SP+LFN+FINDI+D    LGV V G  + R T + GLLFADDLV ++   ++L Q  D +T W  + EM  G+ KC +M I +    LSS   D+W L G  +P+V EY YLG + +  LD++  +  ++    + + +++PFL CR IP+ +R  V   ++ P  L+GAE++G+R+  T  +      A + +AG           L REL IPP+ A AAARR RA  K  S+KTWV+T+   P + R+ TW TG   W+ R+       IPD  PD+  S++ T
Sbjct:  451 EEDSDLDVDDAAKRLVSTIQRVAQECHI--LKDAGERPPAGKSHTSAASSTGRAAHLSHRTRSLIARKRALFLKLQRIPHGSERWERTMREYLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRFR------IPDVGPDSSPSQAAT 1186          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 395 bits (1014), Expect = 3.840e-112
Identity = 275/806 (34.12%), Postives = 414/806 (51.36%), Query Frame = 1
Query:    1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAVADAAATRMVDTAFQVAK-----AHRVTKLREPKR--KPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
            LR++R++  +  I+L+GDFN+        L R    ++   +R      G+R +G+   R IDH ++    P +     +VI+ VD+SDH P+V+ +  +      P      + I E       ++R A+ D     + D A   A+     A  ++ ++E K+  K  L      AI  R K+++      G   N + +   Y   K+ A    R DRR      ++ A   M T+ P+  W +    +G   +   S +          L+TG  + S +W  H+E LA D TGNSRS ++W       +  +    D  +T  E+  AL     +K+ G DG+P++  KL   +    SP AK    ++N +W+ + IP++   S +V IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL++   +H++    QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+ G +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+IFIND+LDG +  GV V G + E    + GLLFADD V +A +   L    ++LT W  + EM     KCG+M I  ST  L      + + G  +  V EY YLG+VFN K +    + N    G +   +M  FL  R IP  MR+A+VR V++P L +G E++GM       +Q   + A RLVAGVG S A+  +    EL I  I    +  R R   K +  KTW++ ++N P K+R  TW +GT RW  R++
Sbjct:  771 LRKMRQKKKKSKIMLIGDFNKDTESTISMLNRIGIGLRRATVRNSK---GSRMNGAVMGRMIDH-ITYSGFPNNPTYA-KVIKSVDLSDHLPVVAEWDMEALKIPAPQRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAADELSCIKEEKQRFKTVLSKETLNAIQRRRKLFK------GISKNPSLS-EEYSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRIR--NELKIDEINTRVSVARERGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRFL 1546          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 377 bits (968), Expect = 3.080e-111
Identity = 214/604 (35.43%), Postives = 334/604 (55.30%), Query Frame = 1
Query:  580 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
            W ++EE    A++  ++DR++   K L     + ++   K  W +   +A  +R       +PV   D   L+ G  +I  +W++H+E+L+ D  G S+  + W K    P    L   D+PIT  E+  AL    + KA+G DG+P +F K+   D   ESP    +  ++  ++    +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN     + +    QAGFRK EEC+ Q  C  EI +RR L+ K T  +F+D KKAYD VPHE LFAKL  YG  G +L F+ +LY N + SVR GD  S+TF  + GV+QGCP SP LFN++IN+IL+G   +G+   GN  +    V GLLFADD V  A + + +    + L  W  + +M   I KCG+M    + +R        K   AN+P V  Y YLG+  NR LD++ ++ ++     + +  + P +   +IP+P+RV +++ V++P   FG+E+YGM    T  +Q  ++KA R      A+     +  + E+ I  I   AA  R RA  K  + +T ++ ++ T FK  + TW TGT RW+ R +
Sbjct:   93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPAN--YCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLL 677          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 379 bits (974), Expect = 1.450e-108
Identity = 267/809 (33.00%), Postives = 416/809 (51.42%), Query Frame = 1
Query:    1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGE-GEGDLDELDRQAVADAA------ATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
            LR+LR +  +D I+L GDFN+        L R    ++   +       G+R +G+   R IDH+    ++ +P       +V++ VD+SDH P+++ +  +  D+ T       + I E GE  +      A+ +         +R+    ++ A+     K+ +      L     +A + R K ++R     GD    T     Y + K+ +  L R DRR      ++ A    +    +  W +    +G  R     G  PV + D   L+T     +  W TH+E+LA D TGNSRS D+W    T A   P     D P++  E+ +AL     +K+ G DG+P++  KL   ++   SP+AK +  I+N +W  + +P++   S VV IPKKGD+ D NNYRGISL+ T+ KV+  I++ RL     ++ + +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+   +   I  LY + ++ VR G   S+      GVRQGCP SP+LF+I+IND+L G +  GV + G     +  +SGLLFADD V +A +   L    ++++ W Q+ EM     KCG+M I  STR L      + + G  +  V  Y YLG+VFN K +    + N    G + + +M  FL  + IP  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+    L  EL I  I    +  R R  +K  ++KTW++ +++ PFK+R  TW +GT RW  R++
Sbjct:  324 LRKLRIKGRKDKIMLAGDFNKNTDSTVALLNRIGIGLRRATVTNSK---GSRMNGATMGRMIDHISFSGLINNPN----YTKVLKSVDLSDHLPVMAEWNIEALDSPTVPRKINVESIKELGESFVSNNRFAALTEPEFNIEDLTSRLTKGIWESAEEVNAIKIEKISNSTVLSKETIKATNKRRKAFKR---LIGDPRTATE----YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFL 1098          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1YD24_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YD24_9FUNG)

HSP 1 Score: 364 bits (934), Expect = 2.090e-107
Identity = 260/802 (32.42%), Postives = 402/802 (50.12%), Query Frame = 1
Query:   10 LREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGE-GEGDLDELDRQAVADAAA------TRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNR 2382
            LR +  +D I+L GDFN+        L R    ++  M    K + +     G  R IDH+    ++ +P       +V++ VD+SDH P+++ +  +  D+ T       + I E GE  + +    A+A+  +      + + +  ++ A+     K+ +      L     + I+ R K ++R     GD          Y + K+ +  L R DRR      ++ A    +    +  W +    +G  R     G  P+ + D   L+T     +  W TH+E LA D TGNSRS D+W      P        D P++  E+ +AL     +K+ G DG+P++  KL   +    SP AK    I+N +W  + +P++   S VV IPKKGD+ D NNYRGISL+ T+ KV+  I++ RL     ++ + +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+   +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+I+IND+L G +  GV + G     +  +SGLLFADD V +A + + L    ++++ W Q+ EM     KCG+M I   T  L      + + G  +  V  Y YLG+VFN K +    + N    G +   +M  FL  + IP  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+    L  EL I  I    +  R R   K +S KTW++ +++ P K+R  TW +GT RW  R
Sbjct:    1 LRTKRRKDKIILAGDFNKNTDSTVALLNRIGVGLRRAMVTNSKGSRMNGATMG--RMIDHISFSGLINNPN----YAKVLKSVDLSDHLPVMAEWNIEALDSPTAPRKINVELIKEIGESFVSKNRFAALAELESNIEDLTSSLNNGIWESAEELNAIKIEKISISTVLSKETIKVINKRRKAFKR---LIGDPKT----LIEYRDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRELWSWLKRFSGRFRSSLIDG--PIYNNDN-KLITDTNAKAEVWATHFEELAKDSTGNSRSADKWENIGTIPAV--FPECDAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEKEPTSPFAKVTSRIINGIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGDKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EATISGLLFADDAVVLAESPSELQIALEKISAWSQKWEMQINQEKCGIMGINSCTGML------FTVMGKPIEQVTNYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAVRLVAGVGRSTALQR--LRNELKIEDIFTRVSVARDRGHSKWASSKTWISDLIHEPLKNRLDTWVSGTVRWKKR 770          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 372 bits (954), Expect = 2.180e-107
Identity = 261/806 (32.38%), Postives = 410/806 (50.87%), Query Frame = 1
Query:    1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAV-------ADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
            LR+LR +  +  I+L+GDFN+        L R    ++  +    K + +     G  R IDH+  +  A+  ++ +   V++ VD+SDH P+++ +  +      P      + + +        +R AV        +     +  + ++ A+     K  +   +  L       I  R K++++  K         +    Y E K+ + +L R+DRR      +  A    +    +  W +    +G  R     G  P+ +     L+T +   +  W  H+E LA D TGNSRS ++W +   +         D P++  E+  AL     +K+ G DG+P++  KL   +    SP AK LL ++N +W  + IP++   S VV IPKKGD+ + NNYRGISL+ T+ KV+  IIS RL +   ++N+ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+RG +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+IFIND+L G +  GV + G + E    ++GLLFADD V +A +   L    ++L+ W  + EM     KCG+M I  ST  L      + + G ++  V EY YLG+VFN K +    + +    G +   +M  FL  + IP  MRVA++R V++P L +G E++GM    +  +Q   + A RLVAGVG S A+    L  EL I  I    +  R R   K +S KTW++ ++  PFK+R  TW +GT RW  R++
Sbjct:  147 LRKLRSKKKKTKILLVGDFNKDIKSTVSMLNRIGIGLRRAVVSNSKGSRMNNATMG--RMIDHVAYTGFANNPNYAK---VLKSVDLSDHLPVIAEWNIESLKIPLPPKRIDTEKMKKQGTRFISDNRFAVLASLEPNTENLVNSVTTSIWETAEELDALKTMKAGYRRVLSNETLETIRKRRKVFKKLSKD-------PSLAIEYSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFL 922          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG)

HSP 1 Score: 368 bits (945), Expect = 3.490e-106
Identity = 266/820 (32.44%), Postives = 414/820 (50.49%), Query Frame = 1
Query:    1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSD---------RADAATPAGFPVADGIGEGEGDLDELDRQAVADAAATRMVDTA----FQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTG----SGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQW----VKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
            LR+L  +  +  I+L+GDFN+        L R    ++   +R      G+R +G++  R IDH+  S  A+  ++ +   V++ VD+SDH P+V+ +  +         R DAA        + +GE           A  D+    +V++     ++ A+     K      +  L       I  R K++++  K    +         Y   K+   +L RQDR       ++ A   M          S ++  W ++ +G    S +          L+T +   +  W +H+E LA D TGNSRS  +W      +TA          D P++  E+  AL     +K+ G DG+P++  K+   +    SP+AK +L ++  +W  + IP++   S V+ IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL +   ++++ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPHEAL  K+   G+ G +   I  LY + ++ VR GD  S+T     GVRQGCP SP+LF+I+IND+LDG + + +P     +E    + GLLFADD V +A +   L    ++LT W Q+ EM     KCG+M I  ST  L      + + G  +  V+EY YLG+VFN K +    + N      +   +M  FL  + +P  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+S   L  E+ I  I   A+  R R   K ++ KTW+  ++N PFK+R  TW +GT RW  R++
Sbjct:   85 LRKLCARNKKAKILLIGDFNKDINSTVALLNRIGIGLRRAVVRNSK---GSRLNGARIGRMIDHIAFSGFANNPNYAK---VLKSVDLSDHLPVVAEWNIESLMSPVLTKRIDAAK------INELGESFTSCSRFAVLADKDSNTENLVNSVTKSIYETAEELDALKTIASDYRTVLSKETLETIRKRRKVFKKLSKDPSVEVE-------YSGLKEKTIQLCRQDRMNNRKVEVKKACDLM------ICNKSRELWSWLKRFSGRFSSSLVDGPIFDKNRQLITDSEAKAEVWASHFEELAKDSTGNSRSAKKWRDIGKNYTA-----EFTECDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP----GIEEC--IPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFL 860          
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG)

HSP 1 Score: 365 bits (938), Expect = 6.720e-105
Identity = 260/807 (32.22%), Postives = 398/807 (49.32%), Query Frame = 1
Query:    1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRP---RVIRKVDISDHYPLVSTFRSDRADAATPA---GFPVADGIGEGEGDLDELDRQAVADAAATRMVDTA----FQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
            LR+LR +  +  IVLMGDFN+        L R    ++  ++       G+R +G   T+  M+  +A+    L  P   +V++ VD+SDH P++S +  +      P           IGE     +     A  D+    +VD+     ++ A+     K    + +  L       I  R KM+++  K    +         Y + K+ A +L R+DRR      ++ A    +    +  W +    +G  R     G  P+   +   L+T +   +  W  H+E LA D TGNSRS ++W               D P++  E+  AL      K+ G DG+P++  K    ++   SP AK L  ++  +W  + IPE+   S VV IPKKGD+ + NNYRGISL+ T+ KV+  II  RL +   ++++ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPHEAL  K+   G+ G +   I  LY + ++ VR G   S+      GVRQGCP SP+LF+I+IND+LDG + + +P     +       GLLFADD V +A +   L    ++LT W  + EM     KCGVM I  ST  L      + + G  +  V +Y YLG+VFN K +    + N    G +   +M  FL  + IP  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+    L  EL I  +    +  R R   K ++ KTW++ ++  P K+R  TW +GT RW  R++
Sbjct:  125 LRKLRSKKRKAKIVLMGDFNKDTNSTISMLNRIGIGLRRADVNNSK---GSRMNGV--TMGRMIDHVAY-SGFLNSPNYAKVLKSVDLSDHLPVISEWNIESLKTPVPPKRIDTAKMKEIGESFISNNRFSVLADQDSNTENLVDSVTTSIWETAEELDALKTTPSEYRRVLSNETLETIRKRRKMFKKLAKDPSIEME-------YSDLKEKAIQLCREDRRNNRKAEVKKACDLMLGNKSRELWSWLKRFSGRFRSSLVEG--PIFDKNK-KLVTESEKKAEVWAAHFEELAKDSTGNSRSAEKW-HGMGNDSAGVFTECDTPLSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKIPGIDKGIP------GLLFADDAVVLAESPAELQIALEKLTAWSLKWEMQINQEKCGVMGINSSTGML------FTIMGKTIAQVSDYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDVFTRVSVARERGHNKWTTSKTWISDLITQPLKNRLDTWVSGTVRWEKRFL 900          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE0.000e+062.54Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO3.040e-12734.56Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A3M2C3P5_9GAMM2.970e-11735.64Reverse transcriptase domain-containing protein n=... [more]
A0A1R1YP44_9FUNG3.840e-11234.12LINE-1 retrotransposable element ORF2 protein (Fra... [more]
L7JX89_TRAHO3.080e-11135.43RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1X7T5_9FUNG1.450e-10833.00RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YD24_9FUNG2.090e-10732.42RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YAQ4_9FUNG2.180e-10732.38RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1Y7R2_9FUNG3.490e-10632.44Putative RNA-directed DNA polymerase from transpos... [more]
A0A1R1X4V9_9FUNG6.720e-10532.22Putative RNA-directed DNA polymerase from transpos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1518contigP-littoralis_Contig1518:781..4448 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog45157.CMT010CT
PFAMsDUF4283,Exo_endo_phos_2,RVT_1
Model size3423
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.14e-80
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota
DescriptionRibonuclease H protein
Cds size2544
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789725.268042-UTR-P-littoralis_Contig1518:780..8251680789725.268042-UTR-P-littoralis_Contig1518:780..825Pylaiella littoralis U1_48UTRP-littoralis_Contig1518 781..825 +
1680789725.3065834-UTR-P-littoralis_Contig1518:3614..44481680789725.3065834-UTR-P-littoralis_Contig1518:3614..4448Pylaiella littoralis U1_48UTRP-littoralis_Contig1518 3615..4448 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789725.2781124-CDS-P-littoralis_Contig1518:825..11251680789725.2781124-CDS-P-littoralis_Contig1518:825..1125Pylaiella littoralis U1_48CDSP-littoralis_Contig1518 826..1125 +
1680789725.287108-CDS-P-littoralis_Contig1518:1287..33721680789725.287108-CDS-P-littoralis_Contig1518:1287..3372Pylaiella littoralis U1_48CDSP-littoralis_Contig1518 1288..3372 +
1680789725.2979326-CDS-P-littoralis_Contig1518:3455..36141680789725.2979326-CDS-P-littoralis_Contig1518:3455..3614Pylaiella littoralis U1_48CDSP-littoralis_Contig1518 3456..3614 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1518.2.1prot_P-littoralis_Contig1518.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1518 826..3614 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1518.2.1

>prot_P-littoralis_Contig1518.2.1 ID=prot_P-littoralis_Contig1518.2.1|Name=mRNA_P-littoralis_Contig1518.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=848bp
MGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVS
MMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIG
EGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKAS
IARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKT
WTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLM
TGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPI
TMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILN
LMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIIS
TRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLM
FVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLF
SETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRV
SGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVS
TRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGAR
MVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQL
QMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSM
KTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSRS
RTAAWYIASEFADNRLSSARTADTLRLLKASHTLFDAALVGSGAPGG*
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mRNA from alignment at P-littoralis_Contig1518:781..4448+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1518.2.1 ID=mRNA_P-littoralis_Contig1518.2.1|Name=mRNA_P-littoralis_Contig1518.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3668bp|location=Sequence derived from alignment at P-littoralis_Contig1518:781..4448+ (Pylaiella littoralis U1_48)
CTACGACGACTACGGGAGCAATTCCCGCAGGACTCCATTGTGCTCATGGG GGATTTTAACCGGGTCCGTACCGAGGTGGACCGGTGGCTACGCCGAACAC CTTACCCGATCAAGGTAATGGAGCTCAGGGAGAAGGACGCCGAACTGGGA ACGCGCGAGCATGGATCCAAGCGGACGATTGACCACATGGTGTCCATGAT GGCGCACCCCGAGGATCACCTCAGGCGTCCTCGGGTGATCAGGAAGGTGG ACATATCCGACCACTACCCGCTGGTCAGCACGTTTAGGAGCGACCGGGCC GATGCGGCCACTCCGGCCGGCTTCCCAGTTGCCGACGGCATAGGTGTCCA TGTCACACGCGAGGAGGGCCAGCCCATCAGGATAGAATGCGCAGCATTAC CGATGCCAGGATCGTACTGGTACAGGAAAGGAGGGATCCGGGGGCAGAGG AATCATCAACGCATGGTACACTCTACGTACTGGACTCCCCTCCTAGACCT CCTCGAGGAAGGCGAGGGGGATCTTGATGAGCTGGACCGACAAGCTGTGG CAGATGCCGCGGCAACACGCATGGTGGACACGGCCTTCCAGGTCGCCAAA GCCCACCGCGTTACGAAACTAAGGGAACCCAAGCGGAAGCCGGCTCTCAA AGCCTCAATCGCGCGGGCCATCGACGATCGAGGGAAGATGTACAGGCGCG CCAGAAAGACCAGGGGAGATGACGCCAATAGGACCGCAGCATGGGCAGCA TACGAGGAGACTAAGAAGACCGCCGAACGACTGGTTCGACAGGACCGCCG CAAAACATGGACGAAAGCGCTCCAAACAGCGAGCGCGCAGATGCGTACTG ATCCGAAAGCGTTCTGGAAATTCTCCTCGGATGTCGCTGGGTGGAAACGC AAGGATACAGGCAGCGGACTCCAACCGGTGAAACACCCGGATACAGGTGT GCTGATGACCGGCGCTGCCGACATTAGCGCGTCCTGGAAAACCCACTACG AGCGACTTGCTTCCGACGTTACAGGGAATAGCAGGTCCCCCGACCAATGG GTGAAATGGACCGCCGCGCCTCAGCGCCCCCACCTAGCATCGTTGGATGA ACCAATAACGATGCCCGAATTGAATGAAGCCCTCCTCCGACTTAAGAGAC ACAAGGCTTCCGGCCGGGACGGATTACCAGCAGATTTTCTGAAACTCGCG GCAGGTGACGTGGGAACCGAGTCACCCATGGCCAAGGCCCTCCTAGGGAT ACTCAACCTAATGTGGAAATACCAGATTATCCCCGAGGAGTGGCAGGACT CCACGGTGGTCTCGATCCCCAAGAAAGGAGATGTCGCCGACATGAACAAC TACCGAGGGATCTCGCTCATGAGCACCGTCCTTAAGGTACTTGTGATGAT TATCAGCACGCGCCTCAACGAGACCTTTGAAGAACACAACCTGTTCTCGC ACGCACAAGCAGGATTTAGGAAGAAAGAGGAATGTGTGACCCAGGCCGCA TGCCTCCTCGAGATCGCGCAACGACGCAAGCTCCAACGCAAGGCGACATT TCTCATGTTCGTCGATCTCAAGAAGGCCTACGACACGGTGCCGCACGAAG CGTTATTCGCCAAACTCGATTTTTACGGTGTGCGCGGGAACATGTTGGGT TTTATCCGCAAGCTGTATGCGAACAGCCGTATCTCTGTCCGGACCGGAGA CCTTTTCTCGGAGACTTTTGGCCTGAAACGCGGGGTGAGACAAGGGTGCC CCCTATCACCGGTCCTGTTCAATATATTCATTAATGATATCCTGGACGGA ACCGAGACACTTGGAGTACCGGTATCGGGAAACAATGTAGAACGCAAAAC TCGTGTCTCCGGACTTTTGTTCGCCGATGACCTTGTTGCTATCGCCTCAA CCCGGAACCGACTAGCTCAACTCGGGGATCGGCTGACCAAATGGTTGCAG GAGAACGAGATGTCAGCCGGGATTCACAAATGCGGGGTCATGGCCATTGG CGTGAGCACGCGGCGACTCTCCTCGACGCCGGATAGATGGAAGCTTGCGG GCGCGAACCTGCCCATTGTCCGTGAATATACGTACCTGGGCCTCGTTTTC AACCGCAAGTTAGATGTGGAGGTTATGATGGGGAACAAACTGGCGGCGGG GGCCCGCATGGTATCGGCAATGGCGCCGTTTCTCCGCTGCCGACAGATCC CCGTGCCGATGAGAGTCGCCGTCGTGCGCGGAGTGATTTTGCCCAGGCTC CTATTTGGTGCGGAGGTGTATGGCATGCGCAAAGCGATCACCCATAGGAT GCAACTGCAGATGAATAAGGCATTTAGATTGGTGGCTGGAGTTGGTGCCT CGGCTGCCGTATCCAATGTCGCCCTGTGGCGGGAGCTGGACATCCCCCCG ATTTGCGCTAGCGCCGCAGCACGTCGTGCGCGAGCGCTCCAAAAAGCTAG TTCGATGAAAACTTGGGTTGCCACGATGGTCAATACACCGTTCAAGCACC GCCGCTGGACTTGGTGCACGGGAACCCACCGTTGGATGAACCGGTACATT CACCGTCTTGCTAGCTGGATTCCGGACGAATTGCCTGACAACGTCAGACA ACCGGGGGATGGCGGGAATTAACCCCAACGATTTTAAGCTCCCACCTCAC CACGGCGGTATGGCGACGCGAAGAGAGGCTGTCCCGTTCAAGGACGGCGG CCTGGTACATTGCATCTGAGTTTGCCGACAACCGCCTGTCCTCGGCGCGG ACGGCGGACACGCTGCGCTTGCTGAAGGCCTCGCATACATTATTCGATGC CGCATTGGTGGGTTCTGGGGCGCCGGGCGGCTAAGCCGGCGGGATTTGGT TCATCCCCGATACTTAACATTGTGCCCGTGCTGCATGGAGACGGAAGAAG AGACACTTGCGCACGTACTATTCGATTGCTCCCGGTGGCGGGAGGGTCGG GATAGCCTACTACACGGGCTTATTGCGGAAGCCGACACGATCATCGGCTC CGCTAACTCAGGAACTGCTCAGCAAAAGGTTGCCCTGCTTCTCGGAGGGA AGTATAAAGGGACCGCAGCGTTGAAGTCTTGGAATTTCGAATCAGAATTA CGGGGGTCGGTCTCGCCTACGGAGGCATGCGGCATACCTAACCCGGAAGA CGATAAGGACGAACCCTCGACGGAACCGTTGCGCTCACCCAGGGTTTTGG AACTTGGTTGCCTCCGGGTGGCATCTTTCCTTGTATGGGTGATGGGTATG CGGCTGCCCATCATCCGGGCTTTGGGGAATCCCCAAGGCCAGCCTTCCTC CGCGGATCAAAGCGCTAACGCGTAGGGTAGCTCGAGTGGACTACGTCGTT GGGCGTCTCCACGTACTGAGCATGACTGGGATGTCCGGAAGGGTTCGTTA GGCGGTGAGGGGTTCTCCCAAGTCCGTCACTACCGGTTGACAATCGTGCA GGTCGACTGGTGTCTAGCCCAAGGACCTGTAAGGGACGCCCCGCAATGGG CGGCTGGTCTCGCAAGAGATAACGAACTTAGATGTCCTTCTAGGGAGTCA ATAGGTGTGAGAACATCGCCGGCTTACCTGGAGCACCGCAAAGTGCGGGT AAAGATTGCCCCCCGATACTTCCCAGGGTATCGAATGGTTCAAAATTGGA CCCCGCGTTGGAATGAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1518:781..4448+

>mRNA_P-littoralis_Contig1518.2.1 ID=mRNA_P-littoralis_Contig1518.2.1|Name=mRNA_P-littoralis_Contig1518.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2544bp|location=Sequence derived from alignment at P-littoralis_Contig1518:781..4448+ (Pylaiella littoralis U1_48)
ATGGGGGATTTTAACCGGGTCCGTACCGAGGTGGACCGGTGGCTACGCCG
AACACCTTACCCGATCAAGGTAATGGAGCTCAGGGAGAAGGACGCCGAAC
TGGGAACGCGCGAGCATGGATCCAAGCGGACGATTGACCACATGGTGTCC
ATGATGGCGCACCCCGAGGATCACCTCAGGCGTCCTCGGGTGATCAGGAA
GGTGGACATATCCGACCACTACCCGCTGGTCAGCACGTTTAGGAGCGACC
GGGCCGATGCGGCCACTCCGGCCGGCTTCCCAGTTGCCGACGGCATAGGT
GAAGGCGAGGGGGATCTTGATGAGCTGGACCGACAAGCTGTGGCAGATGC
CGCGGCAACACGCATGGTGGACACGGCCTTCCAGGTCGCCAAAGCCCACC
GCGTTACGAAACTAAGGGAACCCAAGCGGAAGCCGGCTCTCAAAGCCTCA
ATCGCGCGGGCCATCGACGATCGAGGGAAGATGTACAGGCGCGCCAGAAA
GACCAGGGGAGATGACGCCAATAGGACCGCAGCATGGGCAGCATACGAGG
AGACTAAGAAGACCGCCGAACGACTGGTTCGACAGGACCGCCGCAAAACA
TGGACGAAAGCGCTCCAAACAGCGAGCGCGCAGATGCGTACTGATCCGAA
AGCGTTCTGGAAATTCTCCTCGGATGTCGCTGGGTGGAAACGCAAGGATA
CAGGCAGCGGACTCCAACCGGTGAAACACCCGGATACAGGTGTGCTGATG
ACCGGCGCTGCCGACATTAGCGCGTCCTGGAAAACCCACTACGAGCGACT
TGCTTCCGACGTTACAGGGAATAGCAGGTCCCCCGACCAATGGGTGAAAT
GGACCGCCGCGCCTCAGCGCCCCCACCTAGCATCGTTGGATGAACCAATA
ACGATGCCCGAATTGAATGAAGCCCTCCTCCGACTTAAGAGACACAAGGC
TTCCGGCCGGGACGGATTACCAGCAGATTTTCTGAAACTCGCGGCAGGTG
ACGTGGGAACCGAGTCACCCATGGCCAAGGCCCTCCTAGGGATACTCAAC
CTAATGTGGAAATACCAGATTATCCCCGAGGAGTGGCAGGACTCCACGGT
GGTCTCGATCCCCAAGAAAGGAGATGTCGCCGACATGAACAACTACCGAG
GGATCTCGCTCATGAGCACCGTCCTTAAGGTACTTGTGATGATTATCAGC
ACGCGCCTCAACGAGACCTTTGAAGAACACAACCTGTTCTCGCACGCACA
AGCAGGATTTAGGAAGAAAGAGGAATGTGTGACCCAGGCCGCATGCCTCC
TCGAGATCGCGCAACGACGCAAGCTCCAACGCAAGGCGACATTTCTCATG
TTCGTCGATCTCAAGAAGGCCTACGACACGGTGCCGCACGAAGCGTTATT
CGCCAAACTCGATTTTTACGGTGTGCGCGGGAACATGTTGGGTTTTATCC
GCAAGCTGTATGCGAACAGCCGTATCTCTGTCCGGACCGGAGACCTTTTC
TCGGAGACTTTTGGCCTGAAACGCGGGGTGAGACAAGGGTGCCCCCTATC
ACCGGTCCTGTTCAATATATTCATTAATGATATCCTGGACGGAACCGAGA
CACTTGGAGTACCGGTATCGGGAAACAATGTAGAACGCAAAACTCGTGTC
TCCGGACTTTTGTTCGCCGATGACCTTGTTGCTATCGCCTCAACCCGGAA
CCGACTAGCTCAACTCGGGGATCGGCTGACCAAATGGTTGCAGGAGAACG
AGATGTCAGCCGGGATTCACAAATGCGGGGTCATGGCCATTGGCGTGAGC
ACGCGGCGACTCTCCTCGACGCCGGATAGATGGAAGCTTGCGGGCGCGAA
CCTGCCCATTGTCCGTGAATATACGTACCTGGGCCTCGTTTTCAACCGCA
AGTTAGATGTGGAGGTTATGATGGGGAACAAACTGGCGGCGGGGGCCCGC
ATGGTATCGGCAATGGCGCCGTTTCTCCGCTGCCGACAGATCCCCGTGCC
GATGAGAGTCGCCGTCGTGCGCGGAGTGATTTTGCCCAGGCTCCTATTTG
GTGCGGAGGTGTATGGCATGCGCAAAGCGATCACCCATAGGATGCAACTG
CAGATGAATAAGGCATTTAGATTGGTGGCTGGAGTTGGTGCCTCGGCTGC
CGTATCCAATGTCGCCCTGTGGCGGGAGCTGGACATCCCCCCGATTTGCG
CTAGCGCCGCAGCACGTCGTGCGCGAGCGCTCCAAAAAGCTAGTTCGATG
AAAACTTGGGTTGCCACGATGGTCAATACACCGTTCAAGCACCGCCGCTG
GACTTGGTGCACGGGAACCCACCGTTGGATGAACCGGTACATTCACCGTC
TTGCTAGCTGGATTCCGGACGAATTGCCTGACAACAGGCTGTCCCGTTCA
AGGACGGCGGCCTGGTACATTGCATCTGAGTTTGCCGACAACCGCCTGTC
CTCGGCGCGGACGGCGGACACGCTGCGCTTGCTGAAGGCCTCGCATACAT
TATTCGATGCCGCATTGGTGGGTTCTGGGGCGCCGGGCGGCTAA
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