mRNA_P-littoralis_Contig1518.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 1051 bits (2718), Expect = 0.000e+0 Identity = 536/857 (62.54%), Postives = 648/857 (75.61%), Query Frame = 1
Query: 1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAAT------------------------------------PAGF-------------PVADGIGEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELP 2424
+R LR ++P DSI+LMGDFNR+R V++W I+V EL KDA+LGTR+HGSKR IDH+++ +AHP+D LR PRV+RKVDISDHYP+VSTFRSDRADA+T P G P+AD I EG +L D A+ DAAA+RMV+ + QVA+ TK +R PALK IARAIDDRG++YR A++ R + AW Y E + AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+ GLQPV+HPD+ L+T A DISA+W+THY+RLA+DVTGNSR D+W W AAPQR H+ LD PI E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP GN +ER R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG RRL PDRWKLAG LPIV YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+ A VS+VALWREL+IPPICASAAARRAR +QKAS +KTW+A+++ P+KHR+WTW TGT RWMNRY HRLA D+LP
Sbjct: 137 MRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYESIRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADASTGDSVGVPINARTIQRGERINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLP 993
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 425 bits (1093), Expect = 3.040e-127 Identity = 300/868 (34.56%), Postives = 445/868 (51.27%), Query Frame = 1
Query: 1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAEL---GTREHGSKRTIDHMVSMMAHPEDHLRRPRVI---RKVDISDHYPLVSTF--------------------------RSDRADAATPAGFPVADGI-----------------GEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRR-ARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLA 2400
L +LRE+FP+D+IV+ GD+N ++D LRR + +DA GT GS R IDH V+ L P + D SDH+P+ ++ + R D + P D + G + D +D A AD + TA +V V++ R P L+ SI AI R + ++ RG ++ A Y + + +VR +RR+ +A+ A R + FWK++ +A + QPV P +GVL T +I+A W HY L D R+ W P P L ++ PI EL +AL RL +KASG DG+ A+ LKLA +SP K+LL ++N +W + +P++W S VVSI KKGDV M+NYRGIS+M ++K+L+ +++ RL + + + L Q GF EEC Q A + +IA RR+ T+ F+DL+KAYDT+PHE LF+KL+ G+ G+ML F++ LY +S + V+TG+ + S+ ++RG+RQGCP SP+LFNIFINDI DG E LG V G + + RV G LFADD V +A + + L + ++W +++ M G+ KCGVMA+G + L DRW+L G +P+V EY YLG + N L + ++G+++ R V A+ L R IP+ +R +V++ ILP L +G EV+GM +R+Q +N+ R + GVGA A V+ L REL I PI A AAA R RA KA ++ T ++ +V P + R TW +GT RW++R+ A
Sbjct: 33 LAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVFASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSID--ADADGFVQAVWSTARRVGA---VSRTRRKSLGPPLQRSILGAIARRRHAFLALCQEARGPI--QSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASA 891
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 406 bits (1043), Expect = 2.970e-117 Identity = 268/752 (35.64%), Postives = 391/752 (51.99%), Query Frame = 1
Query: 367 ELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAA-----------------YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSRSRT 2451
E D D AA R+V T +VA+ + L++ +P S A G+ + +TR A + A + Y T+ A+ VR++ R +W K +Q +R D K W++ S AG+ + QP+KHP + ++T +I+ +W ++ LA D TG+ W + ++ P P L L+ P+ E+ ALL +K KA G DG+ ADFLKL G D G ++ PMA L +L MW + +P W + VV I K +GD +M NYRGISL+ VLK+L II+ RL ++ N H QAGFR +EEC+ L E+ +RR++ + ++L F+DLKKAYDTVPH ALF KL+ GVRG L FI+ LY +S +S R L+RG+RQGCP+SP+LFN+FINDI+D LGV V G + R T + GLLFADDLV ++ ++L Q D +T W + EM G+ KC +M I + LSS D+W L G +P+V EY YLG + + LD++ + ++ + + +++PFL CR IP+ +R V ++ P L+GAE++G+R+ T + A + +AG L REL IPP+ A AAARR RA K S+KTWV+T+ P + R+ TW TG W+ R+ IPD PD+ S++ T
Sbjct: 451 EEDSDLDVDDAAKRLVSTIQRVAQECHI--LKDAGERPPAGKSHTSAASSTGRAAHLSHRTRSLIARKRALFLKLQRIPHGSERWERTMREYLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRFR------IPDVGPDSSPSQAAT 1186
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 395 bits (1014), Expect = 3.840e-112 Identity = 275/806 (34.12%), Postives = 414/806 (51.36%), Query Frame = 1
Query: 1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAVADAAATRMVDTAFQVAK-----AHRVTKLREPKR--KPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
LR++R++ + I+L+GDFN+ L R ++ +R G+R +G+ R IDH ++ P + +VI+ VD+SDH P+V+ + + P + I E ++R A+ D + D A A+ A ++ ++E K+ K L AI R K+++ G N + + Y K+ A R DRR ++ A M T+ P+ W + +G + S + L+TG + S +W H+E LA D TGNSRS ++W + + D +T E+ AL +K+ G DG+P++ KL + SP AK ++N +W+ + IP++ S +V IPKKGD+ D NNYRGISL+ T+ KVL II+ RL++ +H++ QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ G + I LY + ++ VR GD S+ GVRQGCP SP+LF+IFIND+LDG + GV V G + E + GLLFADD V +A + L ++LT W + EM KCG+M I ST L + + G + V EY YLG+VFN K + + N G + +M FL R IP MR+A+VR V++P L +G E++GM +Q + A RLVAGVG S A+ + EL I I + R R K + KTW++ ++N P K+R TW +GT RW R++
Sbjct: 771 LRKMRQKKKKSKIMLIGDFNKDTESTISMLNRIGIGLRRATVRNSK---GSRMNGAVMGRMIDH-ITYSGFPNNPTYA-KVIKSVDLSDHLPVVAEWDMEALKIPAPQRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAADELSCIKEEKQRFKTVLSKETLNAIQRRRKLFK------GISKNPSLS-EEYSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRIR--NELKIDEINTRVSVARERGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRFL 1546
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO) HSP 1 Score: 377 bits (968), Expect = 3.080e-111 Identity = 214/604 (35.43%), Postives = 334/604 (55.30%), Query Frame = 1
Query: 580 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
W ++EE A++ ++DR++ K L + ++ K W + +A +R +PV D L+ G +I +W++H+E+L+ D G S+ + W K P L D+PIT E+ AL + KA+G DG+P +F K+ D ESP + ++ ++ +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN + + QAGFRK EEC+ Q C EI +RR L+ K T +F+D KKAYD VPHE LFAKL YG G +L F+ +LY N + SVR GD S+TF + GV+QGCP SP LFN++IN+IL+G +G+ GN + V GLLFADD V A + + + + L W + +M I KCG+M + +R K AN+P V Y YLG+ NR LD++ ++ ++ + + + P + +IP+P+RV +++ V++P FG+E+YGM T +Q ++KA R A+ + + E+ I I AA R RA K + +T ++ ++ T FK + TW TGT RW+ R +
Sbjct: 93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPAN--YCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLL 677
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG) HSP 1 Score: 379 bits (974), Expect = 1.450e-108 Identity = 267/809 (33.00%), Postives = 416/809 (51.42%), Query Frame = 1
Query: 1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGE-GEGDLDELDRQAVADAA------ATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
LR+LR + +D I+L GDFN+ L R ++ + G+R +G+ R IDH+ ++ +P +V++ VD+SDH P+++ + + D+ T + I E GE + A+ + +R+ ++ A+ K+ + L +A + R K ++R GD T Y + K+ + L R DRR ++ A + + W + +G R G PV + D L+T + W TH+E+LA D TGNSRS D+W T A P D P++ E+ +AL +K+ G DG+P++ KL ++ SP+AK + I+N +W + +P++ S VV IPKKGD+ D NNYRGISL+ T+ KV+ I++ RL ++ + + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ + I LY + ++ VR G S+ GVRQGCP SP+LF+I+IND+L G + GV + G + +SGLLFADD V +A + L ++++ W Q+ EM KCG+M I STR L + + G + V Y YLG+VFN K + + N G + + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ L EL I I + R R +K ++KTW++ +++ PFK+R TW +GT RW R++
Sbjct: 324 LRKLRIKGRKDKIMLAGDFNKNTDSTVALLNRIGIGLRRATVTNSK---GSRMNGATMGRMIDHISFSGLINNPN----YTKVLKSVDLSDHLPVMAEWNIEALDSPTVPRKINVESIKELGESFVSNNRFAALTEPEFNIEDLTSRLTKGIWESAEEVNAIKIEKISNSTVLSKETIKATNKRRKAFKR---LIGDPRTATE----YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFL 1098
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1YD24_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YD24_9FUNG) HSP 1 Score: 364 bits (934), Expect = 2.090e-107 Identity = 260/802 (32.42%), Postives = 402/802 (50.12%), Query Frame = 1
Query: 10 LREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGE-GEGDLDELDRQAVADAAA------TRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNR 2382
LR + +D I+L GDFN+ L R ++ M K + + G R IDH+ ++ +P +V++ VD+SDH P+++ + + D+ T + I E GE + + A+A+ + + + + ++ A+ K+ + L + I+ R K ++R GD Y + K+ + L R DRR ++ A + + W + +G R G P+ + D L+T + W TH+E LA D TGNSRS D+W P D P++ E+ +AL +K+ G DG+P++ KL + SP AK I+N +W + +P++ S VV IPKKGD+ D NNYRGISL+ T+ KV+ I++ RL ++ + + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ + I LY + ++ VR GD S+ GVRQGCP SP+LF+I+IND+L G + GV + G + +SGLLFADD V +A + + L ++++ W Q+ EM KCG+M I T L + + G + V Y YLG+VFN K + + N G + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ L EL I I + R R K +S KTW++ +++ P K+R TW +GT RW R
Sbjct: 1 LRTKRRKDKIILAGDFNKNTDSTVALLNRIGVGLRRAMVTNSKGSRMNGATMG--RMIDHISFSGLINNPN----YAKVLKSVDLSDHLPVMAEWNIEALDSPTAPRKINVELIKEIGESFVSKNRFAALAELESNIEDLTSSLNNGIWESAEELNAIKIEKISISTVLSKETIKVINKRRKAFKR---LIGDPKT----LIEYRDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRELWSWLKRFSGRFRSSLIDG--PIYNNDN-KLITDTNAKAEVWATHFEELAKDSTGNSRSADKWENIGTIPAV--FPECDAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEKEPTSPFAKVTSRIINGIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGDKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EATISGLLFADDAVVLAESPSELQIALEKISAWSQKWEMQINQEKCGIMGINSCTGML------FTVMGKPIEQVTNYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAVRLVAGVGRSTALQR--LRNELKIEDIFTRVSVARDRGHSKWASSKTWISDLIHEPLKNRLDTWVSGTVRWKKR 770
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG) HSP 1 Score: 372 bits (954), Expect = 2.180e-107 Identity = 261/806 (32.38%), Postives = 410/806 (50.87%), Query Frame = 1
Query: 1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAV-------ADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
LR+LR + + I+L+GDFN+ L R ++ + K + + G R IDH+ + A+ ++ + V++ VD+SDH P+++ + + P + + + +R AV + + + ++ A+ K + + L I R K++++ K + Y E K+ + +L R+DRR + A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W + + D P++ E+ AL +K+ G DG+P++ KL + SP AK LL ++N +W + IP++ S VV IPKKGD+ + NNYRGISL+ T+ KV+ IIS RL + ++N+ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+RG + I LY + ++ VR GD S+ GVRQGCP SP+LF+IFIND+L G + GV + G + E ++GLLFADD V +A + L ++L+ W + EM KCG+M I ST L + + G ++ V EY YLG+VFN K + + + G + +M FL + IP MRVA++R V++P L +G E++GM + +Q + A RLVAGVG S A+ L EL I I + R R K +S KTW++ ++ PFK+R TW +GT RW R++
Sbjct: 147 LRKLRSKKKKTKILLVGDFNKDIKSTVSMLNRIGIGLRRAVVSNSKGSRMNNATMG--RMIDHVAYTGFANNPNYAK---VLKSVDLSDHLPVIAEWNIESLKIPLPPKRIDTEKMKKQGTRFISDNRFAVLASLEPNTENLVNSVTTSIWETAEELDALKTMKAGYRRVLSNETLETIRKRRKVFKKLSKD-------PSLAIEYSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFL 922
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG) HSP 1 Score: 368 bits (945), Expect = 3.490e-106 Identity = 266/820 (32.44%), Postives = 414/820 (50.49%), Query Frame = 1
Query: 1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSD---------RADAATPAGFPVADGIGEGEGDLDELDRQAVADAAATRMVDTA----FQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTG----SGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQW----VKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
LR+L + + I+L+GDFN+ L R ++ +R G+R +G++ R IDH+ S A+ ++ + V++ VD+SDH P+V+ + + R DAA + +GE A D+ +V++ ++ A+ K + L I R K++++ K + Y K+ +L RQDR ++ A M S ++ W ++ +G S + L+T + + W +H+E LA D TGNSRS +W +TA D P++ E+ AL +K+ G DG+P++ K+ + SP+AK +L ++ +W + IP++ S V+ IPKKGD+ D NNYRGISL+ T+ KVL II+ RL + ++++ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPHEAL K+ G+ G + I LY + ++ VR GD S+T GVRQGCP SP+LF+I+IND+LDG + + +P +E + GLLFADD V +A + L ++LT W Q+ EM KCG+M I ST L + + G + V+EY YLG+VFN K + + N + +M FL + +P MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+S L E+ I I A+ R R K ++ KTW+ ++N PFK+R TW +GT RW R++
Sbjct: 85 LRKLCARNKKAKILLIGDFNKDINSTVALLNRIGIGLRRAVVRNSK---GSRLNGARIGRMIDHIAFSGFANNPNYAK---VLKSVDLSDHLPVVAEWNIESLMSPVLTKRIDAAK------INELGESFTSCSRFAVLADKDSNTENLVNSVTKSIYETAEELDALKTIASDYRTVLSKETLETIRKRRKVFKKLSKDPSVEVE-------YSGLKEKTIQLCRQDRMNNRKVEVKKACDLM------ICNKSRELWSWLKRFSGRFSSSLVDGPIFDKNRQLITDSEAKAEVWASHFEELAKDSTGNSRSAKKWRDIGKNYTA-----EFTECDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP----GIEEC--IPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFL 860
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG) HSP 1 Score: 365 bits (938), Expect = 6.720e-105 Identity = 260/807 (32.22%), Postives = 398/807 (49.32%), Query Frame = 1
Query: 1 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRP---RVIRKVDISDHYPLVSTFRSDRADAATPA---GFPVADGIGEGEGDLDELDRQAVADAAATRMVDTA----FQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI 2388
LR+LR + + IVLMGDFN+ L R ++ ++ G+R +G T+ M+ +A+ L P +V++ VD+SDH P++S + + P IGE + A D+ +VD+ ++ A+ K + + L I R KM+++ K + Y + K+ A +L R+DRR ++ A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W D P++ E+ AL K+ G DG+P++ K ++ SP AK L ++ +W + IPE+ S VV IPKKGD+ + NNYRGISL+ T+ KV+ II RL + ++++ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPHEAL K+ G+ G + I LY + ++ VR G S+ GVRQGCP SP+LF+I+IND+LDG + + +P + GLLFADD V +A + L ++LT W + EM KCGVM I ST L + + G + V +Y YLG+VFN K + + N G + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ L EL I + + R R K ++ KTW++ ++ P K+R TW +GT RW R++
Sbjct: 125 LRKLRSKKRKAKIVLMGDFNKDTNSTISMLNRIGIGLRRADVNNSK---GSRMNGV--TMGRMIDHVAY-SGFLNSPNYAKVLKSVDLSDHLPVISEWNIESLKTPVPPKRIDTAKMKEIGESFISNNRFSVLADQDSNTENLVDSVTTSIWETAEELDALKTTPSEYRRVLSNETLETIRKRRKMFKKLAKDPSIEME-------YSDLKEKAIQLCREDRRNNRKAEVKKACDLMLGNKSRELWSWLKRFSGRFRSSLVEG--PIFDKNK-KLVTESEKKAEVWAAHFEELAKDSTGNSRSAEKW-HGMGNDSAGVFTECDTPLSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKIPGIDKGIP------GLLFADDAVVLAESPAELQIALEKLTAWSLKWEMQINQEKCGVMGINSSTGML------FTIMGKTIAQVSDYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDVFTRVSVARERGHNKWTTSKTWISDLITQPLKNRLDTWVSGTVRWEKRFL 900 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1518.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1518.2.1 >prot_P-littoralis_Contig1518.2.1 ID=prot_P-littoralis_Contig1518.2.1|Name=mRNA_P-littoralis_Contig1518.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=848bp MGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSback to top mRNA from alignment at P-littoralis_Contig1518:781..4448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1518.2.1 ID=mRNA_P-littoralis_Contig1518.2.1|Name=mRNA_P-littoralis_Contig1518.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3668bp|location=Sequence derived from alignment at P-littoralis_Contig1518:781..4448+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1518:781..4448+ >mRNA_P-littoralis_Contig1518.2.1 ID=mRNA_P-littoralis_Contig1518.2.1|Name=mRNA_P-littoralis_Contig1518.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2544bp|location=Sequence derived from alignment at P-littoralis_Contig1518:781..4448+ (Pylaiella littoralis U1_48)back to top |