mRNA_P-littoralis_Contig151.31.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 390 bits (1001), Expect = 1.480e-127 Identity = 203/399 (50.88%), Postives = 243/399 (60.90%), Query Frame = 2
Query: 5 EMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE--------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
E+ D RSDTYVGRC PC+EYPDG+ K V +AV LE +L +L IDCKE GPEYN RSAR+ILRVG N DGYW + LC QL+A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + D S N+GGE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAI+R WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 262 EITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 660
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 387 bits (995), Expect = 2.310e-122 Identity = 205/414 (49.52%), Postives = 244/414 (58.94%), Query Frame = 2
Query: 2 MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE----------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
ME+ D RSDTYVGRC PC+EYPDG+ K V +AV LE +L +L IDCKE GPEYN RSAR+ILRVG N DGYW + LC QL+A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + D S N+GGE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 695 MEITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 1108
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 362 bits (930), Expect = 7.320e-120 Identity = 203/464 (43.75%), Postives = 244/464 (52.59%), Query Frame = 2
Query: 2 MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTC----------------DDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE--------------------------------------------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
ME+ D RSDTYVGRC PC+EYPDG+ K V +AV LE +L +L IDCKE GPEYN RSAR+ILRVG N DGYW + LC QL+A+F FE+SR+PGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + D S N+GGE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS+++LSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 4 MEVTDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWXSAXXXXXXXXXXXXXDSNRLCVQLEAIFAAFEISRQPGRQMLEVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRWDHWFSFLFQGLKCRRALHASFEVDVLFEVSSAFSLELYSAAMHLDSRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 467
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 348 bits (892), Expect = 1.020e-113 Identity = 186/387 (48.06%), Postives = 223/387 (57.62%), Query Frame = 2
Query: 2 MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE----------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATG 895
ME+ D RSDTYVGRC PC+EYPDG+ K V +AV LE +L +L IDCKE GPEYN RSAR+ILRVG N DGYW + LC QL+A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + D S N+GGE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ G
Sbjct: 130 MEITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE) HSP 1 Score: 316 bits (809), Expect = 9.410e-103 Identity = 164/324 (50.62%), Postives = 195/324 (60.19%), Query Frame = 2
Query: 5 EMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAEEGDGSECGNEGGEDTEPDRQGEGDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
E+ D RSDTYVGRC PC+EYPDG+ K V +AV LE +L +L IDCKE GPEYN RSAR+ILRVG N DGYW + LC QL+A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + G TR L +R WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 72 EITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTE------------------AEAVGTTRSSML----------------------------------------FQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 337
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE) HSP 1 Score: 266 bits (681), Expect = 1.430e-82 Identity = 150/341 (43.99%), Postives = 187/341 (54.84%), Query Frame = 2
Query: 38 SDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAEEG----------------------------------------------------------------------DGSECGNEGGEDTEP---DRQG---------------EGDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSL 796
S+ Y+GRC PC+E+PDG+ +K V + V++LE +L +L IDCK EYN R+AR+ILRVG N DGYW C+ LC QL A+F FELSREPGRQM +FDNSTGH A+SPDALRAQN+A AGG+Q P F + GR I T F+ G L F T P +K EE D S+ N+GGE + D + +G +RRCC R ++S + AF+EQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++KAIERR CDYS++SL
Sbjct: 124 SEYYIGRCKPCEEHPDGV-KKKVADVVKVLERVLSELGIDCKA---EYNIARAARIILRVGKNLDGYWDCNRLCVQLPAIFAAFELSREPGRQMLMVFDNSTGHNAFSPDALRAQNIALSAGGEQVPPHSFEYNGRTIYTTFQLGDKLRFKTAPFARKTEEEKTAKKRNGKKLGVFPIGTVIRQGTPSEKLVGIAKGMKEILEDMELYKLDGESKPPKLECQRCLDEAKAKRDKSKMYNKGGESRQQALADNEDSDXXXXXXXXXXXXTDGTSRRCCCRRIISEVKAFQEQMNRVEELFEAAGHVCIFLAKYHPELNAIERFWGYTKAIERRVCDYSVQSL 460
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5JDB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB4_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.360e-63 Identity = 105/172 (61.05%), Postives = 123/172 (71.51%), Query Frame = 2
Query: 2 MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE 517
ME+ D RSDTYVGRC PC+EYPDG+ K V +AV LE +L +L IDCKE GPEYN RSAR+ILRVG N DGYW + LC QL+A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E
Sbjct: 337 MEITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTE 508
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5JR66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR66_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.580e-45 Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 2
Query: 521 GDGSECGNEGGEDTEPDRQGE-GDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
G G E G E G GE G RRCC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++YRDLK+W HR +T R DAV+
Sbjct: 146 GQGEEDGGEDGASVGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKYLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 298
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE) HSP 1 Score: 162 bits (410), Expect = 2.980e-45 Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 2
Query: 419 PRPFVHEGR--RIPTVFEEGSVLLFDTNPTPKKA---EEGDGSECGNEGGEDTEPDRQGE-GDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
P P VHE R R ++ F+ ++ G G E G E G+ + GE G RRCC+ VLS L AF+E+ N VE +F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++ DLK+W HR +T R DAV+
Sbjct: 10 PTPRVHECRACRAEKAATRQAITAFNRGGEGRQHVVDSTGQGKEDGGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGDAVI 201
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5KWI8_9PHAE (Uncharacterized protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI8_9PHAE) HSP 1 Score: 162 bits (411), Expect = 3.210e-44 Identity = 71/128 (55.47%), Postives = 95/128 (74.22%), Query Frame = 2
Query: 593 RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
RRCC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++YRDLK+W HR +T R DAV+
Sbjct: 108 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRVWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig151.31.1 >prot_P-littoralis_Contig151.31.1 ID=prot_P-littoralis_Contig151.31.1|Name=mRNA_P-littoralis_Contig151.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=325bp MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEback to top mRNA from alignment at P-littoralis_Contig151:157097..159047- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig151.31.1 ID=mRNA_P-littoralis_Contig151.31.1|Name=mRNA_P-littoralis_Contig151.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1951bp|location=Sequence derived from alignment at P-littoralis_Contig151:157097..159047- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig151:157097..159047- >mRNA_P-littoralis_Contig151.31.1 ID=mRNA_P-littoralis_Contig151.31.1|Name=mRNA_P-littoralis_Contig151.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=975bp|location=Sequence derived from alignment at P-littoralis_Contig151:157097..159047- (Pylaiella littoralis U1_48)back to top |