mRNA_P-littoralis_Contig151.31.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig151.31.1
Unique NamemRNA_P-littoralis_Contig151.31.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 1.480e-127
Identity = 203/399 (50.88%), Postives = 243/399 (60.90%), Query Frame = 2
Query:    5 EMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE--------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
            E+ D      RSDTYVGRC PC+EYPDG+  K V +AV  LE +L +L IDCKE GPEYN  RSAR+ILRVG N DGYW  + LC QL+A+F  FE+SREPGRQM  +FDNSTGH AYSPDALRAQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K E                                                        + D S   N+GGE  +   +GEGD+                   RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAI+R WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD  D VL
Sbjct:  262 EITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 660          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 2.310e-122
Identity = 205/414 (49.52%), Postives = 244/414 (58.94%), Query Frame = 2
Query:    2 MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE----------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
            ME+ D      RSDTYVGRC PC+EYPDG+  K V +AV  LE +L +L IDCKE GPEYN  RSAR+ILRVG N DGYW  + LC QL+A+F  FE+SREPGRQM  +FDNSTGH AYSPDALRAQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K E                                                                      + D S   N+GGE  +   +GEGD+                   RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD  D VL
Sbjct:  695 MEITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 1108          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 7.320e-120
Identity = 203/464 (43.75%), Postives = 244/464 (52.59%), Query Frame = 2
Query:    2 MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTC----------------DDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE--------------------------------------------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
            ME+ D      RSDTYVGRC PC+EYPDG+  K V +AV  LE +L +L IDCKE GPEYN  RSAR+ILRVG N DGYW                  + LC QL+A+F  FE+SR+PGRQM  +FDNSTGH AYSPDALRAQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K E                                                                                                        + D S   N+GGE  +   +GEGD+                   RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS+++LSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD  D VL
Sbjct:    4 MEVTDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWXSAXXXXXXXXXXXXXDSNRLCVQLEAIFAAFEISRQPGRQMLEVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRWDHWFSFLFQGLKCRRALHASFEVDVLFEVSSAFSLELYSAAMHLDSRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 467          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 1.020e-113
Identity = 186/387 (48.06%), Postives = 223/387 (57.62%), Query Frame = 2
Query:    2 MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE----------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATG 895
            ME+ D      RSDTYVGRC PC+EYPDG+  K V +AV  LE +L +L IDCKE GPEYN  RSAR+ILRVG N DGYW  + LC QL+A+F  FE+SREPGRQM  +FDNSTGH AYSPDALRAQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K E                                                                      + D S   N+GGE  +   +GEGD+                   RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ G
Sbjct:  130 MEITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 9.410e-103
Identity = 164/324 (50.62%), Postives = 195/324 (60.19%), Query Frame = 2
Query:    5 EMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAEEGDGSECGNEGGEDTEPDRQGEGDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
            E+ D      RSDTYVGRC PC+EYPDG+  K V +AV  LE +L +L IDCKE GPEYN  RSAR+ILRVG N DGYW  + LC QL+A+F  FE+SREPGRQM  +FDNSTGH AYSPDALRAQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K E                   +  G TR   L                                         +R WG++K+IERR CDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD  D VL
Sbjct:   72 EITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTE------------------AEAVGTTRSSML----------------------------------------FQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 337          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 1.430e-82
Identity = 150/341 (43.99%), Postives = 187/341 (54.84%), Query Frame = 2
Query:   38 SDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAEEG----------------------------------------------------------------------DGSECGNEGGEDTEP---DRQG---------------EGDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSL 796
            S+ Y+GRC PC+E+PDG+ +K V + V++LE +L +L IDCK    EYN  R+AR+ILRVG N DGYW C+ LC QL A+F  FELSREPGRQM  +FDNSTGH A+SPDALRAQN+A  AGG+Q  P  F + GR I T F+ G  L F T P  +K EE                                                                       D S+  N+GGE  +    D +                +G +RRCC R ++S + AF+EQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++KAIERR CDYS++SL
Sbjct:  124 SEYYIGRCKPCEEHPDGV-KKKVADVVKVLERVLSELGIDCKA---EYNIARAARIILRVGKNLDGYWDCNRLCVQLPAIFAAFELSREPGRQMLMVFDNSTGHNAFSPDALRAQNIALSAGGEQVPPHSFEYNGRTIYTTFQLGDKLRFKTAPFARKTEEEKTAKKRNGKKLGVFPIGTVIRQGTPSEKLVGIAKGMKEILEDMELYKLDGESKPPKLECQRCLDEAKAKRDKSKMYNKGGESRQQALADNEDSDXXXXXXXXXXXXTDGTSRRCCCRRIISEVKAFQEQMNRVEELFEAAGHVCIFLAKYHPELNAIERFWGYTKAIERRVCDYSVQSL 460          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5JDB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB4_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 1.360e-63
Identity = 105/172 (61.05%), Postives = 123/172 (71.51%), Query Frame = 2
Query:    2 MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLEIDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE 517
            ME+ D      RSDTYVGRC PC+EYPDG+  K V +AV  LE +L +L IDCKE GPEYN  RSAR+ILRVG N DGYW  + LC QL+A+F  FE+SREPGRQM  +FDNSTGH AYSPDALRAQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K E
Sbjct:  337 MEITDEGATLSRSDTYVGRCKPCEEYPDGMKTKKVSDAVHSLERVLSELNIDCKESGPEYNLARSARIILRVGKNLDGYWDSNRLCVQLEAIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTE 508          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5JR66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR66_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 1.580e-45
Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 2
Query:  521 GDGSECGNEGGEDTEPDRQGE-GDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
            G G E G E G        GE G  RRCC+  VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WLY+EAY  GL+ Y++YRDLK+W  HR +T R DAV+
Sbjct:  146 GQGEEDGGEDGASVGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKYLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 298          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 2.980e-45
Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 2
Query:  419 PRPFVHEGR--RIPTVFEEGSVLLFDTNPTPKKA---EEGDGSECGNEGGEDTEPDRQGE-GDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
            P P VHE R  R        ++  F+     ++      G G E G E G+ +     GE G  RRCC+  VLS L AF+E+ N VE +F+A GH CIFLPKYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WLY+EAY  GL+ Y++  DLK+W  HR +T R DAV+
Sbjct:   10 PTPRVHECRACRAEKAATRQAITAFNRGGEGRQHVVDSTGQGKEDGGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGDAVI 201          
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Match: A0A6H5KWI8_9PHAE (Uncharacterized protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI8_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 3.210e-44
Identity = 71/128 (55.47%), Postives = 95/128 (74.22%), Query Frame = 2
Query:  593 RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 976
            RRCC+  VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WLY+EAY  GL+ Y++YRDLK+W  HR +T R DAV+
Sbjct:  108 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRVWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 235          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2M3_9PHAE1.480e-12750.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7W4_9PHAE2.310e-12249.52Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7K1_9PHAE7.320e-12043.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K344_9PHAE1.020e-11348.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8V9_9PHAE9.410e-10350.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGB3_9PHAE1.430e-8243.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDB4_9PHAE1.360e-6361.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR66_9PHAE1.580e-4552.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKI5_9PHAE2.980e-4544.79Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KWI8_9PHAE3.210e-4455.47Uncharacterized protein n=18 Tax=Ectocarpus sp. CC... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig151contigP-littoralis_Contig151:157097..159047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog588596.U9UK42
Model size976
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.69e-37
EggNOG OGs29JY0@1|root,2RT6R@2759|Eukaryota,39VBJ@33154|Opisthokonta,3P12S@4751|Fungi
Cds size975
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789722.227635-CDS-P-littoralis_Contig151:157096..1573671680789722.227635-CDS-P-littoralis_Contig151:157096..157367Pylaiella littoralis U1_48CDSP-littoralis_Contig151 157097..157367 -
1680789722.240413-CDS-P-littoralis_Contig151:157489..1576571680789722.240413-CDS-P-littoralis_Contig151:157489..157657Pylaiella littoralis U1_48CDSP-littoralis_Contig151 157490..157657 -
1680789722.2524228-CDS-P-littoralis_Contig151:158280..1585461680789722.2524228-CDS-P-littoralis_Contig151:158280..158546Pylaiella littoralis U1_48CDSP-littoralis_Contig151 158281..158546 -
1680789722.2626657-CDS-P-littoralis_Contig151:158776..1590461680789722.2626657-CDS-P-littoralis_Contig151:158776..159046Pylaiella littoralis U1_48CDSP-littoralis_Contig151 158777..159046 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789722.271363-UTR-P-littoralis_Contig151:159046..1590471680789722.271363-UTR-P-littoralis_Contig151:159046..159047Pylaiella littoralis U1_48UTRP-littoralis_Contig151 159047..159047 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig151.31.1prot_P-littoralis_Contig151.31.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig151 157097..159046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig151.31.1

>prot_P-littoralis_Contig151.31.1 ID=prot_P-littoralis_Contig151.31.1|Name=mRNA_P-littoralis_Contig151.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=325bp
MEMKDGKLVEGRSDTYVGRCPPCQEYPDGLMRKSVREAVEILENLLPDLE
IDCKEGGPEYNRQRSARVILRVGVNFDGYWTCDDLCKQLKALFVVFELSR
EPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRI
PTVFEEGSVLLFDTNPTPKKAEEGDGSECGNEGGEDTEPDRQGEGDTRRC
CLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHS
KAIERRACDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLD
GYMQYRDLKKWTCHRSSTDRVDAVL
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mRNA from alignment at P-littoralis_Contig151:157097..159047-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig151.31.1 ID=mRNA_P-littoralis_Contig151.31.1|Name=mRNA_P-littoralis_Contig151.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1951bp|location=Sequence derived from alignment at P-littoralis_Contig151:157097..159047- (Pylaiella littoralis U1_48)
GATGGAGATGAAGGACGGGAAGCTTGTGGAGGGGCGGTCGGACACCTACG TCGGGCGCTGTCCACCTTGCCAAGAGTACCCCGACGGGTTGATGAGGAAG AGCGTTCGCGAGGCGGTGGAGATTCTTGAGAATCTTTTGCCAGACCTCGA GATCGACTGTAAAGAAGGTGGTCCCGAGTACAACCGCCAGCGCTCTGCAA GGGTTATCCTTCGCGTGGGGGTCAACTTCGATGGGTATTGGACTTGCGAC GACTTGTGCAAACAGCTCAAGGTGGGTGCCCGGCAGAGTTTGTGTGATTT TTTTTTTTTAGTGCGGTACATATATGTGTTTACATATCTATACATTATAT AAACCATGGACCGCCCAGGAATACATTATCTTTCGCCTCGCGCATTGGTT TCGAGTGTCCATACGGTGTAGGCCAAAGGGGAAGTATGTTTGCTGTTTTT TGTTCTGTCATGTGTTGTAAACCCCCTTGTGTTTTTGCTCTATTTTGGCA GGCTTTGTTTGTGGTGTTCGAGCTGTCTAGGGAGCCCGGTCGACAGATGT TCAACATCTTCGACAACTCCACCGGGCATGCAGCCTACAGCCCCGATGCC TTGAGGGCGCAAAACGTCGCCGCAGGTGCGGGGGGTCAGCAGGCAGTCCC GCGCCCGTTTGTTCACGAAGGCCGACGGATACCTACAGTGTTCGAGGAGG GCAGCGTGCTTTTATTCGACACGAATCCAACCCCCAAGAAGGCAGAAGAG GGAGATGGCAGTGAGTGGTGATGATAGAGTTTAATTTTGCGCTAAAACAT TGTCTAGACGCTGCACCCTTGGCTTGTATGCTAAGAGACTGACGATATTG TCTCTGGCGTGAGGGACTGTCATGATAGCAAGGCGGCTCCAGTCCCAGCT AATTTTGTGGCTTGATTTACATAAATATGTTGGACTCGCGGAAACGATAC GTTGTCAAACAAATATATGCGACCCTCATTTTGTGATGCACCAACCGGCA CAGGAGCCGCTCAAAAGCTGGGCAAGTTCAAGAAGGGAGACAAGGTCACG CAGGACGGGAAAGCGTGGAAATGTCTAGGACTCGCCAGAGGAGCGAAGGA GATTTTACAAGATTGTGGGTTGTACAAGCTCCCCGGCGAAAGAAAGGCAC CGAAGCTTGCGTGCAAAAGGTGATTTGTGGATGGTGGTGTCTGACAGGTA TACTCAGTGGTTGATTGCTTCGCTATCCTGTGCTATTCTGAAAAAGGAAG GGTTTTGTCACCTTTAAAATGAAACTGGTGCCCGTTGTGATTTTTTTGCC AAGGTGTACCGCCGAGGCGAAAGCCTTGGCGGAGCAGAAGAAACACTACA ACGAGGGGGGGGAATCGCGGGCATCATCGCTGGTAGCTAGTGGTAATGAA GGGGGTGAGGATACGGAACCTGATCGGCAAGGGGAGGGTGATACTCGACG CTGTTGCCTCCGGTTCGTACTCAGCAATCTGCCGGCATTCAAGGAACAGA AGAATCGCGTGGAGGAGGTTTTCGAGGCAGCCGGACATCGGTGTATCTTC CTCCCAAAGTAAGTGTTTTCGCATAATATCGGTCATGAGGTATTTTCTGA AGTGGCACATGATTTTAACCGACTTGTATACGAATAACTAAGAACACCGC TGCACGTCTCCGTGAATTTTCCTTCTCCAGGTATCACCCGGAGTGCAACG CCATCGAGCGAGTCTGGGGGCACTCTAAGGCCATCGAACGCCGGGCGTGC GATTATTCCATCAAGAGTCTTCTAAAACGACTCCCTGCCACCCTTAGCTC CATGTCTCTGTCGCTCATTCGCAAGTGGGCCCGGATTTCGTGGCTCTATG TTGAGGCGTATGCCACGGGGCTCGACGGTTACATGCAATACAGAGACCTA AAGAAGTGGACGTGCCACCGCTCATCTACTGATCGGGTCGATGCCGTGTT G
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Coding sequence (CDS) from alignment at P-littoralis_Contig151:157097..159047-

>mRNA_P-littoralis_Contig151.31.1 ID=mRNA_P-littoralis_Contig151.31.1|Name=mRNA_P-littoralis_Contig151.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=975bp|location=Sequence derived from alignment at P-littoralis_Contig151:157097..159047- (Pylaiella littoralis U1_48)
ATGGAGATGAAGGACGGGAAGCTTGTGGAGGGGCGGTCGGACACCTACGT
CGGGCGCTGTCCACCTTGCCAAGAGTACCCCGACGGGTTGATGAGGAAGA
GCGTTCGCGAGGCGGTGGAGATTCTTGAGAATCTTTTGCCAGACCTCGAG
ATCGACTGTAAAGAAGGTGGTCCCGAGTACAACCGCCAGCGCTCTGCAAG
GGTTATCCTTCGCGTGGGGGTCAACTTCGATGGGTATTGGACTTGCGACG
ACTTGTGCAAACAGCTCAAGGCTTTGTTTGTGGTGTTCGAGCTGTCTAGG
GAGCCCGGTCGACAGATGTTCAACATCTTCGACAACTCCACCGGGCATGC
AGCCTACAGCCCCGATGCCTTGAGGGCGCAAAACGTCGCCGCAGGTGCGG
GGGGTCAGCAGGCAGTCCCGCGCCCGTTTGTTCACGAAGGCCGACGGATA
CCTACAGTGTTCGAGGAGGGCAGCGTGCTTTTATTCGACACGAATCCAAC
CCCCAAGAAGGCAGAAGAGGGAGATGGCAGTGAGTGTGGTAATGAAGGGG
GTGAGGATACGGAACCTGATCGGCAAGGGGAGGGTGATACTCGACGCTGT
TGCCTCCGGTTCGTACTCAGCAATCTGCCGGCATTCAAGGAACAGAAGAA
TCGCGTGGAGGAGGTTTTCGAGGCAGCCGGACATCGGTGTATCTTCCTCC
CAAAGTATCACCCGGAGTGCAACGCCATCGAGCGAGTCTGGGGGCACTCT
AAGGCCATCGAACGCCGGGCGTGCGATTATTCCATCAAGAGTCTTCTAAA
ACGACTCCCTGCCACCCTTAGCTCCATGTCTCTGTCGCTCATTCGCAAGT
GGGCCCGGATTTCGTGGCTCTATGTTGAGGCGTATGCCACGGGGCTCGAC
GGTTACATGCAATACAGAGACCTAAAGAAGTGGACGTGCCACCGCTCATC
TACTGATCGGGTCGATGCCGTGTTG
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