prot_P-littoralis_Contig150.28.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig150.28.2
Unique Name	prot_P-littoralis_Contig150.28.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	278

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig150.28.2 vs. uniprot
Match: A0A6H5JZV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZV9_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 9.150e-67
Identity = 142/276 (51.45%), Postives = 166/276 (60.14%), Query Frame = 0

Query:    1 MAPPDNHAKSIGDDDERYTTCKGLLAYAGKQRAKGQEPLCLGFKALLPPTIVITDXXXXXXXXEDTMFTFYGVGVSVYSKEMLSKNRLPLVNGFSRLTVVKEQEEGEAAPQQRRQKQIDGTKEEVMGGRRHGLAQGQRKPQQHVVDAHGVVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQVDALLDYAVGRVKKQVEMTKQVAEELTKLTPGKLREAAVVQAKKVKEMPTLLLDTSKRMVGSGAKFVQNYIDEQERK 276
            M   D HA ++ DD  +Y +CKG+LAYAG+QRA GQEP CLGFK  LPP I+I  XXXXXXXX    F F GVGVSVY+KEMLS NRLPLVNGFS+L V KE+E  +       +    G  E     R HG  +G R+PQ H        GG                                           R QV+AL+ YAVGR++KQVE+T QV +EL KLTPGKLREA VVQA KV+EMPTLLLDTSKRMV SG KFV+NY++EQERK
Sbjct:    1 MPESDKHA-TVEDDGNQYMSCKGILAYAGQQRAVGQEPQCLGFKTALPPNIIIXXXXXXXXXXXXAKFFFIGVGVSVYNKEMLSNNRLPLVNGFSQLVVSKEEERDKTDALHNGR---IGEYEAAAAARHHG--RGNRQPQPHTAAEASAQGGRQGAAVPTTLSQRSGVAGDGVEERSSSTTG-------------RKQVEALMSYAVGRIRKQVEITMQVTDELKKLTPGKLREATVVQANKVQEMPTLLLDTSKRMVDSGTKFVRNYLEEQERK 257

[Close]

BLAST of mRNA_P-littoralis_Contig150.28.2 vs. uniprot
Match: D8LTV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV3_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 3.820e-36
Identity = 92/204 (45.10%), Postives = 114/204 (55.88%), Query Frame = 0

Query:   73 VGVSVYSKEMLSKNRLPLVNGFSRLTVVKEQEEGEAAPQQRRQKQIDGTKEEVMGGRRHGLAQGQRKPQQHVVDAHGVVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQVDALLDYAVGRVKKQVEMTKQVAEELTKLTPGKLREAAVVQAKKVKEMPTLLLDTSKRMVGSGAKFVQNYIDEQERK 276
            +GVSVY+KEMLS NRLPLVNGFS+L V KE+E+ +A  +   +K      E           +G  +PQ H        GG                                           R QV+AL+ YAVGR++KQV++T QV +EL KLTP K+REA VVQA KV+EMPTLLLDTSKRMV SG KFV+NY++EQERK
Sbjct:    1 MGVSVYNKEMLSNNRLPLVNGFSQLLVSKEEEKDKADARHNGRKG-----EHEADXXXXXXXRGHLQPQPHAAAEAPAQGGRQGAAVPTTLSQRSGVAGDGVEEGSSSTTG-------------RKQVEALMAYAVGRIRKQVDITIQVTDELKKLTPEKVREATVVQANKVQEMPTLLLDTSKRMVDSGTKFVRNYLEEQERK 186

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig150.28.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig150.28.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JZV9_9PHAE	9.150e-67	51.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LTV3_ECTSI	3.820e-36	45.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig150	contig	P-littoralis_Contig150:111213..115266 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig150.28.2	mRNA_P-littoralis_Contig150.28.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig150 110349..115313 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig150.28.2 ID=prot_P-littoralis_Contig150.28.2|Name=mRNA_P-littoralis_Contig150.28.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=278bp
MAPPDNHAKSIGDDDERYTTCKGLLAYAGKQRAKGQEPLCLGFKALLPPT
IVITDEDVVPPPPEDTMFTFYGVGVSVYSKEMLSKNRLPLVNGFSRLTVV
KEQEEGEAAPQQRRQKQIDGTKEEVMGGRRHGLAQGQRKPQQHVVDAHGV
VGGARRGQQEQQQQQKQQGSAVPATLSERRSGANSSNGGEERGGGGRDQV
DALLDYAVGRVKKQVEMTKQVAEELTKLTPGKLREAAVVQAKKVKEMPTL
LLDTSKRMVGSGAKFVQNYIDEQERKK*