mRNA_P-littoralis_Contig15.204.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: D8LL60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL60_ECTSI) HSP 1 Score: 391 bits (1004), Expect = 1.140e-132 Identity = 206/242 (85.12%), Postives = 217/242 (89.67%), Query Frame = 3
Query: 243 MASAEARSPAPSADTATIATKGGTLFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGKA 968
M SA+AR PA +AD AT T GGTL + DFMSKCDLVLASQSPRR EIV MMGLADRVRVVVSEFEENLDK SFKDPRDYAIANAEGKAREVASR L D EGA PIVVVGSDTIVDLDGVILEKPRDDEHAF+MLSS+SGRRHLVHSGVS+FTSKLGK +AAVSFCETT+VLFT LSAEEIRAYIRTREPMDK+GSYGIQGEGGQFVR++DGCYFNVMGFPMHAFSRRLA VI GKA
Sbjct: 1 MTSAQARPPAAAADVAT--TAGGTLLAQGDFMSKCDLVLASQSPRRLEIVGMMGLADRVRVVVSEFEENLDKSSFKDPRDYAIANAEGKAREVASRALLDAE-GEGAEPIVVVGSDTIVDLDGVILEKPRDDEHAFSMLSSLSGRRHLVHSGVSIFTSKLGKDKAAVSFCETTQVLFTALSAEEIRAYIRTREPMDKSGSYGIQGEGGQFVRKVDGCYFNVMGFPMHAFSRRLAEVIRDGKA 239
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A836CIZ2_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ2_9STRA) HSP 1 Score: 249 bits (635), Expect = 3.930e-77 Identity = 129/218 (59.17%), Postives = 158/218 (72.48%), Query Frame = 3
Query: 312 TLFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGK 965
TL +H FM C +VLAS+SPRR+EI +MGL +R+ V+VSEFEE+L K F P DYA A A+ KA EVA++VLP N P +VVGSDTIV+LDG ILEKP D +HAF ML S+SGRRHLVHSGV+VFT G + A + +TT V F +S +EI AY+ + EPMDKAG+YGIQG GGQFV+ ++GCYFNVMGFPM F LA +IE GK
Sbjct: 11 TLLAHKAFMDGCRVVLASKSPRRKEIFGLMGLDERLEVIVSEFEEDLRKADFPQPGDYAAATAKFKAAEVAAKVLPARSDNR---PTIVVGSDTIVELDGTILEKPDDAQHAFRMLKSLSGRRHLVHSGVAVFTGACGSAQPAACWYDTTSVEFLAMSDDEIWAYVESGEPMDKAGAYGIQGLGGQFVKGVEGCYFNVMGFPMSKFGTCLAKLIESGK 225
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A7S2S2U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2U2_9STRA) HSP 1 Score: 222 bits (565), Expect = 3.290e-66 Identity = 119/213 (55.87%), Postives = 147/213 (69.01%), Query Frame = 3
Query: 336 MSKCDLVLASQSPRRREIVSMMGLADRVR--VVVSEFEENLDKGSFKD---PRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEG 959
+S+C LVLAS+SPRRREI +MGL DRV +VVS+FEE+L K F P+ Y A A GKAR VA ++ A P+ VVG+DTIVDLDG +LEKP ++ A A L +SGR H VHS V++F+S+ G E +SFCETT V F LS EI AY+ + EPMDKAGSYGIQG GGQFV +I+GCYFNVMG PM FS +AG++ G
Sbjct: 42 LSRCRLVLASKSPRRREIFDLMGL-DRVGYDIVVSDFEEDLPKSDFPGEDGPQRYCEATATGKARSVAGKIFSQGSGTPSANPVFVVGADTIVDLDGEVLEKPSSEQDAAATLRRLSGRAHFVHSSVAIFSSRHGVAEPVISFCETTRVKFGQLSDAEISAYVASGEPMDKAGSYGIQGLGGQFVDQIEGCYFNVMGLPMRRFSTAIAGLVAG 253
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A7S2UUT0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUT0_9STRA) HSP 1 Score: 219 bits (559), Expect = 7.140e-65 Identity = 125/220 (56.82%), Postives = 150/220 (68.18%), Query Frame = 3
Query: 339 SKCDLVLASQSPRRREIVSMMGLADR--VRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAA---------VSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGK 965
S C +VLASQSPRRREI MMG+ + + VVVS FEENLDK SF +P YA NAE KA++V +++ D + A + VV +DTIVDL G ILEKP D++HAF MLS +SG HLVHSGV++FT A VSF ETTEV LS +EI AYIRT EPMDK+GSYGIQG GGQFV+ + GCYFNVMGFPMH FS +A +I+ K
Sbjct: 73 SSCGIVLASQSPRRREIFDMMGINNSFDINVVVSNFEENLDKSSFDNPGIYAQINAECKAQDVYNQIRNDE--SRHAKSLAVVAADTIVDLRGKILEKPSDEQHAFQMLSELSGTSHLVHSGVALFTRPPVANSGASSEDIEPNIVSFYETTEVEIVPLSEDEIWAYIRTGEPMDKSGSYGIQGIGGQFVKGVRGCYFNVMGFPMHRFSAAMAELIQSKK 290
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: W7UAS6_9STRA (Acetylserotonin o-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAS6_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.760e-62 Identity = 123/224 (54.91%), Postives = 153/224 (68.30%), Query Frame = 3
Query: 333 FMSKCDLVLASQSPRRREIVSMMGLADRVRVVV-SEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLP-----DVGV-----NEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQE-----AAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIE 956
F +K +L+LAS+SPRR+EI+ +MG + VV+ S+F E+LDK +F +P DYA NAE KA+EVA+++ DVG + G +V+GSDTIVD DG+ILEKP D +HA+AMLSS+SGR HLVHSGV++++SK K VSFCET V F LS EEI YIR+ EPMDKAG YGIQG GGQ VR I+GCYF VMG PMH S LA E
Sbjct: 65 FKTKVNLILASKSPRRQEILQLMGFDSKDFVVLPSDFPEDLDKRNFINPADYAQKNAECKAQEVATKLFGGSSSGDVGKVGGQRDAGKKTTIVIGSDTIVDRDGIILEKPEDAQHAYAMLSSLSGRTHLVHSGVAIYSSKGPKSGDGIPLPVVSFCETARVDFAPLSEEEIWNYIRSGEPMDKAGGYGIQGLGGQVVRGIEGCYFTVMGMPMHKLSVALAQFAE 288
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A1X6P3D6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3D6_PORUM) HSP 1 Score: 202 bits (514), Expect = 3.680e-59 Identity = 111/207 (53.62%), Postives = 140/207 (67.63%), Query Frame = 3
Query: 351 LVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLG--KQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGK 965
+VLAS SPRRREI++M+GLA V S FEENLDKG+F P +YA NA KA V + + G G P +V+GSDTIV +DG ILEKPR + A+ ML+++SGR H V S V++FT + + A FCE T V F LS E I AYIRT EPMDKAGSYGIQG GG F+ I GCY+NVMGFP+HAF+ +A +++ G+
Sbjct: 15 IVLASGSPRRREILTMLGLAHEVHA--SAFEENLDKGAFPTPAEYAKTNASSKAAAVVAELA--AGGGAGRCPDLVIGSDTIVVVDGRILEKPRSEAAAYEMLATLSGREHSVLSAVALFTPSRSEVRDKPATVFCEHTRVRFAPLSPETIAAYIRTGEPMDKAGSYGIQGVGGSFITGITGCYYNVMGFPLHAFTSAVARLLDAGE 217
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A7S1TQE1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQE1_9STRA) HSP 1 Score: 202 bits (514), Expect = 3.680e-59 Identity = 115/216 (53.24%), Postives = 140/216 (64.81%), Query Frame = 3
Query: 312 TLFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAA--VSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVI 953
TL D VL S SPRR EI +MGL + +VVS F E+L K SF YA A KAREVA R+LPD G A P V+VGSDT+V++DG +LEKP D E A AML MSGR H VHSGV+VF++ G+ A ++F ETTEV F L+ +I Y+ +REPMDKAG YGIQG GGQ V + GCYFNVMGFPMH FS+ +A ++
Sbjct: 4 TLLGAGDAARSVRWVLGSASPRRAEIFGLMGL--QPEIVVSGFAEDLAKSSFATAAAYAEGTATEKAREVAGRLLPDAG----AQPTVIVGSDTVVEIDGDVLEKPGDVEEAKAMLRRMSGRNHFVHSGVAVFSNLGGRDAGAPTMTFAETTEVTFVELTELDIENYVASREPMDKAGGYGIQGLGGQMVCGLSGCYFNVMGFPMHRFSKSMAELL 213
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: R7QNE7_CHOCR (Maf protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNE7_CHOCR) HSP 1 Score: 197 bits (501), Expect = 2.020e-57 Identity = 111/211 (52.61%), Postives = 142/211 (67.30%), Query Frame = 3
Query: 315 LFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVA-SRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLA 944
+ H + ++VLASQSPRRREI+++MGL V S+FEENLDK SFK PRDY +ANA GKA +VA S+ D+ V+GSDT+V LDG +LEKP+ + AF ML+ +SGR+H V +GVS+ + K + +F E T V F LS + I AYI+T EPMDKAG+YGIQG GG VRRI+GCYF VMG PMHA +R +A
Sbjct: 2 IMEHLPKLQTKNIVLASQSPRRREILTLMGLP--FTPVPSQFEENLDKSSFKSPRDYVMANAHGKAADVAASQTDYDL----------VIGSDTVVVLDGKVLEKPKSEGEAFRMLAQLSGRQHTVATGVSL----IAKGDTTRTFAEETSVWFAHLSDDVIGAYIKTGEPMDKAGAYGIQGRGGALVRRIEGCYFTVMGLPMHALAREIA 196
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A0G4GLH8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLH8_VITBC) HSP 1 Score: 199 bits (506), Expect = 5.880e-57 Identity = 110/202 (54.46%), Postives = 136/202 (67.33%), Query Frame = 3
Query: 351 LVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGA----GPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLA 944
++LAS+SPRR+EI +MGL V V S F E+LD G+F P+ YA ANA KA EVA L G +E + VV+G+DTIVDLDGVILEKP + + A +MLS MSGR H VH+GV++FT + G E F E+T+V F LS EI +Y+ + EPMDKAG YGIQG GG FV I+GCYFNVMG PMH S+ LA
Sbjct: 87 VILASKSPRRKEICGLMGLD--VTVYPSTFAEDLDHGAFSSPQSYAAANAAHKAAEVARGALGAGGDDESSTCPPAADVVIGADTIVDLDGVILEKPANHDDAVSMLSRMSGRCHAVHTGVAIFTRRAGPAEPVAHFVESTKVKFAPLSRSEIDSYVASGEPMDKAGGYGIQGLGGMFVESIEGCYFNVMGLPMHHLSKVLA 286
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A7S0BNY9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNY9_9RHOD) HSP 1 Score: 195 bits (495), Expect = 2.950e-56 Identity = 110/220 (50.00%), Postives = 140/220 (63.64%), Query Frame = 3
Query: 303 KGGTLFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGG 962
+G + H ++S +VLASQSPRRREI+ ++ L + VVVS FEENLDK F P +Y + NA KA EVA R++ P +V+GSDT+V LD ILEKP + AF ML S+S R H V + V++F K A SF E T V F L+ + I YIRTREPMDKAG+YGIQG GG V+ +DGCYFNVMGFPMH F+ LA +++ G
Sbjct: 12 QGFMIVQHLPYLSSKRIVLASQSPRRREILDLLEL--KHDVVVSGFEENLDKSMFSHPSEYVLENARRKAEEVAKRLI-----GSDTPPDLVIGSDTVVVLDNKILEKPLSEAEAFTMLKSLSNRNHTVLTSVALFLKDAKKCSA--SFYEATNVRFAELNDDLIWEYIRTREPMDKAGAYGIQGIGGSLVKGVDGCYFNVMGFPMHRFATELAELVDRG 222 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.204.1 >prot_P-littoralis_Contig15.204.1 ID=prot_P-littoralis_Contig15.204.1|Name=mRNA_P-littoralis_Contig15.204.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=288bp MVPLALRAAITTILLGRTSRGFVGSPSPSPLRKTGAALSSPRTCRMASAEback to top mRNA from alignment at P-littoralis_Contig15:731953..736587+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.204.1 ID=mRNA_P-littoralis_Contig15.204.1|Name=mRNA_P-littoralis_Contig15.204.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4635bp|location=Sequence derived from alignment at P-littoralis_Contig15:731953..736587+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:731953..736587+ >mRNA_P-littoralis_Contig15.204.1 ID=mRNA_P-littoralis_Contig15.204.1|Name=mRNA_P-littoralis_Contig15.204.1|organism=Pylaiella littoralis U1_48|type=CDS|length=864bp|location=Sequence derived from alignment at P-littoralis_Contig15:731953..736587+ (Pylaiella littoralis U1_48)back to top |