mRNA_P-littoralis_Contig15.204.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.204.1
Unique NamemRNA_P-littoralis_Contig15.204.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: D8LL60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL60_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 1.140e-132
Identity = 206/242 (85.12%), Postives = 217/242 (89.67%), Query Frame = 3
Query:  243 MASAEARSPAPSADTATIATKGGTLFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGKA 968
            M SA+AR PA +AD AT  T GGTL +  DFMSKCDLVLASQSPRR EIV MMGLADRVRVVVSEFEENLDK SFKDPRDYAIANAEGKAREVASR L D    EGA PIVVVGSDTIVDLDGVILEKPRDDEHAF+MLSS+SGRRHLVHSGVS+FTSKLGK +AAVSFCETT+VLFT LSAEEIRAYIRTREPMDK+GSYGIQGEGGQFVR++DGCYFNVMGFPMHAFSRRLA VI  GKA
Sbjct:    1 MTSAQARPPAAAADVAT--TAGGTLLAQGDFMSKCDLVLASQSPRRLEIVGMMGLADRVRVVVSEFEENLDKSSFKDPRDYAIANAEGKAREVASRALLDAE-GEGAEPIVVVGSDTIVDLDGVILEKPRDDEHAFSMLSSLSGRRHLVHSGVSIFTSKLGKDKAAVSFCETTQVLFTALSAEEIRAYIRTREPMDKSGSYGIQGEGGQFVRKVDGCYFNVMGFPMHAFSRRLAEVIRDGKA 239          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A836CIZ2_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ2_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.930e-77
Identity = 129/218 (59.17%), Postives = 158/218 (72.48%), Query Frame = 3
Query:  312 TLFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGK 965
            TL +H  FM  C +VLAS+SPRR+EI  +MGL +R+ V+VSEFEE+L K  F  P DYA A A+ KA EVA++VLP    N    P +VVGSDTIV+LDG ILEKP D +HAF ML S+SGRRHLVHSGV+VFT   G  + A  + +TT V F  +S +EI AY+ + EPMDKAG+YGIQG GGQFV+ ++GCYFNVMGFPM  F   LA +IE GK
Sbjct:   11 TLLAHKAFMDGCRVVLASKSPRRKEIFGLMGLDERLEVIVSEFEEDLRKADFPQPGDYAAATAKFKAAEVAAKVLPARSDNR---PTIVVGSDTIVELDGTILEKPDDAQHAFRMLKSLSGRRHLVHSGVAVFTGACGSAQPAACWYDTTSVEFLAMSDDEIWAYVESGEPMDKAGAYGIQGLGGQFVKGVEGCYFNVMGFPMSKFGTCLAKLIESGK 225          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A7S2S2U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2U2_9STRA)

HSP 1 Score: 222 bits (565), Expect = 3.290e-66
Identity = 119/213 (55.87%), Postives = 147/213 (69.01%), Query Frame = 3
Query:  336 MSKCDLVLASQSPRRREIVSMMGLADRVR--VVVSEFEENLDKGSFKD---PRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEG 959
            +S+C LVLAS+SPRRREI  +MGL DRV   +VVS+FEE+L K  F     P+ Y  A A GKAR VA ++         A P+ VVG+DTIVDLDG +LEKP  ++ A A L  +SGR H VHS V++F+S+ G  E  +SFCETT V F  LS  EI AY+ + EPMDKAGSYGIQG GGQFV +I+GCYFNVMG PM  FS  +AG++ G
Sbjct:   42 LSRCRLVLASKSPRRREIFDLMGL-DRVGYDIVVSDFEEDLPKSDFPGEDGPQRYCEATATGKARSVAGKIFSQGSGTPSANPVFVVGADTIVDLDGEVLEKPSSEQDAAATLRRLSGRAHFVHSSVAIFSSRHGVAEPVISFCETTRVKFGQLSDAEISAYVASGEPMDKAGSYGIQGLGGQFVDQIEGCYFNVMGLPMRRFSTAIAGLVAG 253          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A7S2UUT0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUT0_9STRA)

HSP 1 Score: 219 bits (559), Expect = 7.140e-65
Identity = 125/220 (56.82%), Postives = 150/220 (68.18%), Query Frame = 3
Query:  339 SKCDLVLASQSPRRREIVSMMGLADR--VRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAA---------VSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGK 965
            S C +VLASQSPRRREI  MMG+ +   + VVVS FEENLDK SF +P  YA  NAE KA++V +++  D   +  A  + VV +DTIVDL G ILEKP D++HAF MLS +SG  HLVHSGV++FT        A         VSF ETTEV    LS +EI AYIRT EPMDK+GSYGIQG GGQFV+ + GCYFNVMGFPMH FS  +A +I+  K
Sbjct:   73 SSCGIVLASQSPRRREIFDMMGINNSFDINVVVSNFEENLDKSSFDNPGIYAQINAECKAQDVYNQIRNDE--SRHAKSLAVVAADTIVDLRGKILEKPSDEQHAFQMLSELSGTSHLVHSGVALFTRPPVANSGASSEDIEPNIVSFYETTEVEIVPLSEDEIWAYIRTGEPMDKSGSYGIQGIGGQFVKGVRGCYFNVMGFPMHRFSAAMAELIQSKK 290          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: W7UAS6_9STRA (Acetylserotonin o-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAS6_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.760e-62
Identity = 123/224 (54.91%), Postives = 153/224 (68.30%), Query Frame = 3
Query:  333 FMSKCDLVLASQSPRRREIVSMMGLADRVRVVV-SEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLP-----DVGV-----NEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQE-----AAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIE 956
            F +K +L+LAS+SPRR+EI+ +MG   +  VV+ S+F E+LDK +F +P DYA  NAE KA+EVA+++       DVG      + G    +V+GSDTIVD DG+ILEKP D +HA+AMLSS+SGR HLVHSGV++++SK  K         VSFCET  V F  LS EEI  YIR+ EPMDKAG YGIQG GGQ VR I+GCYF VMG PMH  S  LA   E
Sbjct:   65 FKTKVNLILASKSPRRQEILQLMGFDSKDFVVLPSDFPEDLDKRNFINPADYAQKNAECKAQEVATKLFGGSSSGDVGKVGGQRDAGKKTTIVIGSDTIVDRDGIILEKPEDAQHAYAMLSSLSGRTHLVHSGVAIYSSKGPKSGDGIPLPVVSFCETARVDFAPLSEEEIWNYIRSGEPMDKAGGYGIQGLGGQVVRGIEGCYFTVMGMPMHKLSVALAQFAE 288          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A1X6P3D6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3D6_PORUM)

HSP 1 Score: 202 bits (514), Expect = 3.680e-59
Identity = 111/207 (53.62%), Postives = 140/207 (67.63%), Query Frame = 3
Query:  351 LVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLG--KQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGK 965
            +VLAS SPRRREI++M+GLA  V    S FEENLDKG+F  P +YA  NA  KA  V + +    G   G  P +V+GSDTIV +DG ILEKPR +  A+ ML+++SGR H V S V++FT      + + A  FCE T V F  LS E I AYIRT EPMDKAGSYGIQG GG F+  I GCY+NVMGFP+HAF+  +A +++ G+
Sbjct:   15 IVLASGSPRRREILTMLGLAHEVHA--SAFEENLDKGAFPTPAEYAKTNASSKAAAVVAELA--AGGGAGRCPDLVIGSDTIVVVDGRILEKPRSEAAAYEMLATLSGREHSVLSAVALFTPSRSEVRDKPATVFCEHTRVRFAPLSPETIAAYIRTGEPMDKAGSYGIQGVGGSFITGITGCYYNVMGFPLHAFTSAVARLLDAGE 217          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A7S1TQE1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQE1_9STRA)

HSP 1 Score: 202 bits (514), Expect = 3.680e-59
Identity = 115/216 (53.24%), Postives = 140/216 (64.81%), Query Frame = 3
Query:  312 TLFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAA--VSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVI 953
            TL    D       VL S SPRR EI  +MGL  +  +VVS F E+L K SF     YA   A  KAREVA R+LPD G    A P V+VGSDT+V++DG +LEKP D E A AML  MSGR H VHSGV+VF++  G+   A  ++F ETTEV F  L+  +I  Y+ +REPMDKAG YGIQG GGQ V  + GCYFNVMGFPMH FS+ +A ++
Sbjct:    4 TLLGAGDAARSVRWVLGSASPRRAEIFGLMGL--QPEIVVSGFAEDLAKSSFATAAAYAEGTATEKAREVAGRLLPDAG----AQPTVIVGSDTVVEIDGDVLEKPGDVEEAKAMLRRMSGRNHFVHSGVAVFSNLGGRDAGAPTMTFAETTEVTFVELTELDIENYVASREPMDKAGGYGIQGLGGQMVCGLSGCYFNVMGFPMHRFSKSMAELL 213          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: R7QNE7_CHOCR (Maf protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNE7_CHOCR)

HSP 1 Score: 197 bits (501), Expect = 2.020e-57
Identity = 111/211 (52.61%), Postives = 142/211 (67.30%), Query Frame = 3
Query:  315 LFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVA-SRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLA 944
            +  H   +   ++VLASQSPRRREI+++MGL      V S+FEENLDK SFK PRDY +ANA GKA +VA S+   D+          V+GSDT+V LDG +LEKP+ +  AF ML+ +SGR+H V +GVS+    + K +   +F E T V F  LS + I AYI+T EPMDKAG+YGIQG GG  VRRI+GCYF VMG PMHA +R +A
Sbjct:    2 IMEHLPKLQTKNIVLASQSPRRREILTLMGLP--FTPVPSQFEENLDKSSFKSPRDYVMANAHGKAADVAASQTDYDL----------VIGSDTVVVLDGKVLEKPKSEGEAFRMLAQLSGRQHTVATGVSL----IAKGDTTRTFAEETSVWFAHLSDDVIGAYIKTGEPMDKAGAYGIQGRGGALVRRIEGCYFTVMGLPMHALAREIA 196          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A0G4GLH8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLH8_VITBC)

HSP 1 Score: 199 bits (506), Expect = 5.880e-57
Identity = 110/202 (54.46%), Postives = 136/202 (67.33%), Query Frame = 3
Query:  351 LVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGA----GPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLA 944
            ++LAS+SPRR+EI  +MGL   V V  S F E+LD G+F  P+ YA ANA  KA EVA   L   G +E +       VV+G+DTIVDLDGVILEKP + + A +MLS MSGR H VH+GV++FT + G  E    F E+T+V F  LS  EI +Y+ + EPMDKAG YGIQG GG FV  I+GCYFNVMG PMH  S+ LA
Sbjct:   87 VILASKSPRRKEICGLMGLD--VTVYPSTFAEDLDHGAFSSPQSYAAANAAHKAAEVARGALGAGGDDESSTCPPAADVVIGADTIVDLDGVILEKPANHDDAVSMLSRMSGRCHAVHTGVAIFTRRAGPAEPVAHFVESTKVKFAPLSRSEIDSYVASGEPMDKAGGYGIQGLGGMFVESIEGCYFNVMGLPMHHLSKVLA 286          
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Match: A0A7S0BNY9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNY9_9RHOD)

HSP 1 Score: 195 bits (495), Expect = 2.950e-56
Identity = 110/220 (50.00%), Postives = 140/220 (63.64%), Query Frame = 3
Query:  303 KGGTLFSHDDFMSKCDLVLASQSPRRREIVSMMGLADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNEGAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSVFTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQGEGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGG 962
            +G  +  H  ++S   +VLASQSPRRREI+ ++ L  +  VVVS FEENLDK  F  P +Y + NA  KA EVA R++          P +V+GSDT+V LD  ILEKP  +  AF ML S+S R H V + V++F     K  A  SF E T V F  L+ + I  YIRTREPMDKAG+YGIQG GG  V+ +DGCYFNVMGFPMH F+  LA +++ G
Sbjct:   12 QGFMIVQHLPYLSSKRIVLASQSPRRREILDLLEL--KHDVVVSGFEENLDKSMFSHPSEYVLENARRKAEEVAKRLI-----GSDTPPDLVIGSDTVVVLDNKILEKPLSEAEAFTMLKSLSNRNHTVLTSVALFLKDAKKCSA--SFYEATNVRFAELNDDLIWEYIRTREPMDKAGAYGIQGIGGSLVKGVDGCYFNVMGFPMHRFATELAELVDRG 222          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL60_ECTSI1.140e-13285.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CIZ2_9STRA3.930e-7759.17Inosine triphosphate pyrophosphatase-like protein ... [more]
A0A7S2S2U2_9STRA3.290e-6655.87Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2UUT0_9STRA7.140e-6556.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7UAS6_9STRA1.760e-6254.91Acetylserotonin o-methyltransferase n=3 Tax=Monodo... [more]
A0A1X6P3D6_PORUM3.680e-5953.62Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TQE1_9STRA3.680e-5953.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
R7QNE7_CHOCR2.020e-5752.61Maf protein n=1 Tax=Chondrus crispus TaxID=2769 Re... [more]
A0A0G4GLH8_VITBC5.880e-5754.46Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S0BNY9_9RHOD2.950e-5650.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:731953..736587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LL60
Preferred nameASMTL
PFAMsDimerisation2,Maf,Methyltransf_2
Model size1366
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01868,ko:K06287
KEGG ReactionR03663
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
Exons7
Evalue2.1e-136
EggNOG OGsCOG0424@1|root,KOG1509@2759|Eukaryota
Ec32 ortholog descriptionMaf-like protein
Ec32 orthologEc-25_000130.1
EC6.1.1.3
Descriptionnucleoside-triphosphate diphosphatase activity
Cds size864
COG categoryD
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.204.1prot_P-littoralis_Contig15.204.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 732060..736192 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789713.961718-UTR-P-littoralis_Contig15:731952..7320591680789713.961718-UTR-P-littoralis_Contig15:731952..732059Pylaiella littoralis U1_48UTRP-littoralis_Contig15 731953..732059 +
1680789714.0492115-UTR-P-littoralis_Contig15:736192..7365871680789714.0492115-UTR-P-littoralis_Contig15:736192..736587Pylaiella littoralis U1_48UTRP-littoralis_Contig15 736193..736587 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789713.9737709-CDS-P-littoralis_Contig15:732059..7322021680789713.9737709-CDS-P-littoralis_Contig15:732059..732202Pylaiella littoralis U1_48CDSP-littoralis_Contig15 732060..732202 +
1680789713.9841557-CDS-P-littoralis_Contig15:733289..7334491680789713.9841557-CDS-P-littoralis_Contig15:733289..733449Pylaiella littoralis U1_48CDSP-littoralis_Contig15 733290..733449 +
1680789713.9946306-CDS-P-littoralis_Contig15:734425..7345331680789713.9946306-CDS-P-littoralis_Contig15:734425..734533Pylaiella littoralis U1_48CDSP-littoralis_Contig15 734426..734533 +
1680789714.0040178-CDS-P-littoralis_Contig15:734873..7349571680789714.0040178-CDS-P-littoralis_Contig15:734873..734957Pylaiella littoralis U1_48CDSP-littoralis_Contig15 734874..734957 +
1680789714.015345-CDS-P-littoralis_Contig15:735262..7354711680789714.015345-CDS-P-littoralis_Contig15:735262..735471Pylaiella littoralis U1_48CDSP-littoralis_Contig15 735263..735471 +
1680789714.0267024-CDS-P-littoralis_Contig15:735850..7359281680789714.0267024-CDS-P-littoralis_Contig15:735850..735928Pylaiella littoralis U1_48CDSP-littoralis_Contig15 735851..735928 +
1680789714.0380995-CDS-P-littoralis_Contig15:736110..7361921680789714.0380995-CDS-P-littoralis_Contig15:736110..736192Pylaiella littoralis U1_48CDSP-littoralis_Contig15 736111..736192 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.204.1

>prot_P-littoralis_Contig15.204.1 ID=prot_P-littoralis_Contig15.204.1|Name=mRNA_P-littoralis_Contig15.204.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=288bp
MVPLALRAAITTILLGRTSRGFVGSPSPSPLRKTGAALSSPRTCRMASAE
ARSPAPSADTATIATKGGTLFSHDDFMSKCDLVLASQSPRRREIVSMMGL
ADRVRVVVSEFEENLDKGSFKDPRDYAIANAEGKAREVASRVLPDVGVNE
GAGPIVVVGSDTIVDLDGVILEKPRDDEHAFAMLSSMSGRRHLVHSGVSV
FTSKLGKQEAAVSFCETTEVLFTMLSAEEIRAYIRTREPMDKAGSYGIQG
EGGQFVRRIDGCYFNVMGFPMHAFSRRLAGVIEGGKA*
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mRNA from alignment at P-littoralis_Contig15:731953..736587+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.204.1 ID=mRNA_P-littoralis_Contig15.204.1|Name=mRNA_P-littoralis_Contig15.204.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4635bp|location=Sequence derived from alignment at P-littoralis_Contig15:731953..736587+ (Pylaiella littoralis U1_48)
GCGCCAGATCCATCCGAGATCGTAGAGGAAATCCCACAAAACAACCAAAC CACGGCTTCCTACCCTTCGTGCGAGTGCTTGGGGTGGCTCCTCTGTCTAA GAAGCGCATGGTGCCACTGGCGTTGAGAGCAGCAATCACAACCATATTGC TGGGGAGGACCAGCAGGGGCTTTGTAGGCTCACCTAGTCCCTCTCCTCTC CGCAAAACAGGAGCAGCATTGAGCTCTCCGCGGACCTGCAGAATGGCAAG GTGGGTTGGTGGGTTGCTCTGTTGCTCGTACATGATCACCCATACAGAAT AGCAGGAGAAGTGCAGCTTGCAACTGTACCCGCGAGCTCAACAGACAAAG AGTACGGCTTCTTACAAGGCAGCAGCGGGTACGATATGGAAGCAGGCTCG TCGTGCCGTAAGTGGTTTCCAGTGCAGAGACACTGATTGTGAGGCAGAAC ATCGTGAGGCTTCGCCATTTCGATAACGGCTGCTGCTCCTCTCATCGACC GTGCTGCTGTTACCACTGCTAGTCGCGCAGTGTTGTAACTCTACTTTATT TCCGTGGACAAAATACTAGCTCGAATCACAGCGATCGTGTGTTAGCTATC TAGACCTATTTATCATATCATGCGGGATGATGGCATGATACCGCCGTGGA TGAACGTACCGTATTCTACACAAGATACCACACCCCGTGTTAGGTTTTTT GCATTCCGTATTGCTCCACAACCAGGAGGGTGCGAACACCAAACAGCCCG TCATACGAAAGCTCTCGACGAGATCTTTCCAAAACCACCCTTTTCGGCAG TGGCACCCTCCTGGTTGTGGAGCTATACGGAATGCAAAAAGCTTAACACG GGGTGTGGTATCTTGTGTAGAATACGGTAGTCACACACGGGTGTAACGAA ATATACCACCCCCCTCCCTTTTCCCACGTAAACGCAACCACCGCAGGGAA ACAAATCATACTTCGTAGACCACAAAAAATCTGCATCATTCACGGCACTT TCTGTGAACGTTCAACTACCTTAAGCGATCAACTGCTGCAGCTGTATGCA CGGGTGTTATTCACGACTCTGCTTGTGGATTAGCTTGTGTTCACATCCTC ACCCAACACGCGACACCATGAGGGCGAGGCCATCGCGCACGTTTCACGTA CAAGTTACACATTCGGTGCAAACATCAACTCGAACACCACTCGTTACGTC GCTAAAAAAAGCGCATCATACATGACGCTGGCTTTGAAAATCAACCTTGA AAAGTATCGTAGGTATAAATAAGGGAGTTGTGCTGGCGTGCCGTTCCGTG TCCGTCGCATCCTGCATTGTTTGGTTTGGGCGTGCAGCGCCGAGGCTAGA TCACCTGCACCATCCGCCGACACCGCCACCATAGCAACGAAAGGAGGGAC GCTGTTCTCTCATGACGACTTTATGTCTAAGTGCGACCTGGTGCTCGCTA GCCAGAGCCCCCGCCGCCGGGAGATTGTCAGCATGATGGGACTCGCGGTA AGGAGATATGGCCAATCTCGTTTTGGAATCTGGCGTTGCAGCAGATCAGT AGCGAAGTTTGCAACCGAGAACTCGTGTTCGCGGTAAGTAGATGTTGCGG GTCTCGAGACGGGAACTTGTGTTGTCACAGCAGTTTATCAATCTTTCTGA ACCTTATCCTGGGGTAGGTGAAGCAGCAGAATTGAGCATTTGAACTCTCT CCTTTTTGAGTCCGGTCTAATGCGGAGTGAGTGCTTTAGTTCTTCCCACC CGCCATGCACGGAGGAGCCAGTTGTATCATACAGCACCTTACGCGCCCAA CAACAACACACAAGGGATACGATGGCGAGTACTTTCTGCAATATCACACG TCGCAACGTCACAGGTGGAAGTATTACGTACGTTCGATACATCGCGGAAT ATGCAGAAGTGTGTTATCAGACAGGTTTGTGTGTGTGAGATATCATATAC GAGTGGAATAGTAGAGACCGGTAACAAAAGCAGACAGCGGATGGAGGATG CGAGTACTAAACAGCAGCACACAGGGGTACGCCGGCGAGCACCTTCCACC ATGCATATCGCAACGTAAAGATAGGTTCGTGTGTGTGGAGAAAATGACTG ACAACAGTAGTTACGAGCTTTGTGGGAAACAGGATAGCGACCGGGCGAGC CTTCTACTCTCCAAAGGAATCAATCCAGTCTAATCGCGGGCCTTTGTCGC GACCCCTGCGTTTAATATAGCACGTGCTGGGGCTGTTGTACTGGTACACC TCGGCAGCGGACATGCACTCTGAGAGCTGTGAGACTGCGTGTGTTCTCCT TGGCGCCCCTTCGAGTGTACGAAAACAAACCCTCCCGCCCGACAAAAATA TATATATATATATATGCTACTCGACTAGCCTCCTGTGAAGGGGCCAGTAC CAGGAGTATTTTGAGGCGATTTGTTCGCAAGGGACGAACTTATATTGCCG CGCACATGATAATGGTTGCACAGGATCGCGTGCGTGTTGTGGTGTCCGAA TTCGAGGAAAATCTGGATAAGGGAAGTTTCAAGGATCCCAGGGACTACGC CATCGCCAACGCGGAGGGCAAGGCACGGGAGGTAAGGCACGGCACTGTAC TGTCACCCTCGCTTTTAGGCTTCGTTTTGTGCCGTGTCGCCGCAATAATG TTCGAAGACATGCTATCGAGATTAAAAACGCGGGTCTGGCGCATGGACAG GAGCTACCCCTGGAGTGCCGTGCTTATGCAGGGTGATGCAATCGCACACG TATTCAGGTTTGCTTGCTGCAGCGCACGCTTCACCGGTATGCGGGGTACG GAAATGGCTGAGGTCTGTTTGTATTTGTTCCACAGTATGGCGACCTACGA TACGCTGACTACGGATCGACACCCCCGGTGAAATGATAAATTTCAAACAT TATCGTCGCGCATGGAAGCAGGTGGCAAGCCGCGTGCTGCCGGATGTCGG CGTCAATGAGGGAGCAGGGCCGATTGTGGTGGTCGGGTCCGACACTATCG TTGACGTGAGAGCCTTTGGCGTTAAGAGTGCCAATCTGTCTTGATTTGAT CGGACAAATCGTGAGCTGTGGGCGCTTCCTGCTATGAGAAGGAACATGGC AAGCAGCAACTTTTTGAGATCGTTGAGGTGGTCTACAAGCTGTCATACGG ACAGGGGTAGGACTGTGTTTTTTAAGACAGTACAGCACCAGTACGTGTAT GTCACCCTTTTCTTGAATTTCGACTTCGTAGCAGTATTGCTGCACTGCAC ACGCGAAGCAATCGCCTGCCGCGGATACGTTGCACATGCCTGTTCGCATG TTTCTTTCAGCTGGACGGCGTTATTTTAGAGAAGCCCAGGGATGACGAGC ACGCGTTTGCGATGCTCAGCTCTATGAGTGGCCGACGACACCTGGTTCAC TCGGGGGTGAGCGTGTTCACCAGCAAACTGGGGAAACAGGAGGCGGCTGT GAGCTTCTGCGAAACAACGGAAGTTCTGTTCACGATGCTTTCGGCCGAGG AAATCCGCGCATATATCCGGTAAGCAACAGCGGGAGCCAGCTGCAAAAAT ATTCGCATGTAGTTTTTTGGCTGTCGTATGGACATTTTGTAGTAGTGATA GCGGGCGGTTGTACAGAACTCGTTTGCCAGACGCGATATAAAAATGAGGA TCGTAGTTCTTTTGATCATTCGATTGCGATTGCATGCAGGTGTTGTCGTG AATCTTGATACGGCTAATTATGTGGTAGCTGTGGGTAGTTTAACGTGTCT GTCGCGCAAGTGCACGATTGCTCGTTTATACTCATCTAGCTCGTCCTAAT GTATACGAGTACACAGCAGTAGGTTTTTTTATGGATCACAGAATTTTAAA CCACGAATCGTTTCGTTTTCCTCCACTGCATGTTGTGACTCTTGGCAGTA CACGAGAGCCGATGGACAAAGCTGGATCTTACGGAATTCAGGGAGAAGGG GGGCAGTTCGTACGAAGGATAGACGGGTGAGTAGTCGAGGCAATCAGTAT TATTTCGTTGATTTCTCGAACTCAAGAGGCTGACATCGTAGTAGGCAAAG GATTGCTTTCTTTCTAATAGCAGGAAAGTACAGCCGTTGATGTTTTGAAG GACTAACTTAAAAGCCGTGCGGATTTCTACATTCTCCTCCTTCTCATGGT ACCCGCAGGTGCTACTTCAACGTCATGGGCTTTCCTATGCACGCTTTCTC AAGGCGGTTAGCGGGCGTGATCGAAGGGGGAAAGGCATGACCGCTTTCAA GCCCCTACTGCCGTCATCTACAACTGTGTACCGGTGAACGATTGCGGCAA AGCTACGCAGGAATGGGTTGCGGTGCTGCACGAAATAAAATGACGCTCGC TCACTCTTCCGGCCTGATGACCGCGATTTCAACTTGATTTTGGGGTGTGG TTTCAAAGCGTCAACGCGGAGTGCAACTCTCGCGCGTTAAGGAATGCACG TTGGGTTACGATCCTACTACGGCGGCCGCTGTAGAGTCTGGTTCCGCCTC GATTGGTTGTGTTCACAAGGGGCGCAGAACGTGAAGCCCTTTCACAATCT CGAGGTCGAACGAAACAAAACAATAAACGAAGCGCAGGTTCCTAGTCTTG CTCGAACTCCGCTGCTGCGGTTGTTTCCATCGTTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:731953..736587+

>mRNA_P-littoralis_Contig15.204.1 ID=mRNA_P-littoralis_Contig15.204.1|Name=mRNA_P-littoralis_Contig15.204.1|organism=Pylaiella littoralis U1_48|type=CDS|length=864bp|location=Sequence derived from alignment at P-littoralis_Contig15:731953..736587+ (Pylaiella littoralis U1_48)
ATGGTGCCACTGGCGTTGAGAGCAGCAATCACAACCATATTGCTGGGGAG
GACCAGCAGGGGCTTTGTAGGCTCACCTAGTCCCTCTCCTCTCCGCAAAA
CAGGAGCAGCATTGAGCTCTCCGCGGACCTGCAGAATGGCAAGCGCCGAG
GCTAGATCACCTGCACCATCCGCCGACACCGCCACCATAGCAACGAAAGG
AGGGACGCTGTTCTCTCATGACGACTTTATGTCTAAGTGCGACCTGGTGC
TCGCTAGCCAGAGCCCCCGCCGCCGGGAGATTGTCAGCATGATGGGACTC
GCGGATCGCGTGCGTGTTGTGGTGTCCGAATTCGAGGAAAATCTGGATAA
GGGAAGTTTCAAGGATCCCAGGGACTACGCCATCGCCAACGCGGAGGGCA
AGGCACGGGAGGTGGCAAGCCGCGTGCTGCCGGATGTCGGCGTCAATGAG
GGAGCAGGGCCGATTGTGGTGGTCGGGTCCGACACTATCGTTGACCTGGA
CGGCGTTATTTTAGAGAAGCCCAGGGATGACGAGCACGCGTTTGCGATGC
TCAGCTCTATGAGTGGCCGACGACACCTGGTTCACTCGGGGGTGAGCGTG
TTCACCAGCAAACTGGGGAAACAGGAGGCGGCTGTGAGCTTCTGCGAAAC
AACGGAAGTTCTGTTCACGATGCTTTCGGCCGAGGAAATCCGCGCATATA
TCCGTACACGAGAGCCGATGGACAAAGCTGGATCTTACGGAATTCAGGGA
GAAGGGGGGCAGTTCGTACGAAGGATAGACGGGTGCTACTTCAACGTCAT
GGGCTTTCCTATGCACGCTTTCTCAAGGCGGTTAGCGGGCGTGATCGAAG
GGGGAAAGGCATGA
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