mRNA_P-littoralis_Contig15.66.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.66.1 vs. uniprot
Match: Q8QNK3_ESV1K (EsV-1-70 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNK3_ESV1K) HSP 1 Score: 423 bits (1088), Expect = 5.480e-142 Identity = 215/440 (48.86%), Postives = 300/440 (68.18%), Query Frame = 1
Query: 1 ESDFMGPRGDIVSTSDLVRSMAYHAAAAGYSPELEYFEKVSPTFSDIEGSPDVYRDMLRRVESYATLAGGKKVVAAKKAIRVGVSARMAEMRGRPGGPGVFAEDAADMESLFADTDHKKVICKLHRLGRYPEDNPRFYIHMVYRYYTNDAHNALADEGKVLRYPSLQKTMDVKHPVDCVGSTPPEFRMFLRESKGHPVPVASLPVPSKTRANEVVYGYDFESAVPWVPAIRAKIHNMFADLKATGSQAFRQVYPGYLLKGAGR-ESGNKTVLDALARSIEMGDLARALDGIVNNAVATR-VLDRAILVDRGITEVVCSYNRHPFRSSGEQLRERLGFFLQDSVRGVFRSAARRIPS-FCEILYTSLGIPCVTMDAFDEFCRSKNAMNYRLRDEDAWRIFIIDLQKICFIFHARSRADEVSRFMSENGSGDGYLRRVLSTL 1311
++DFMG GDIVS +DLV +MA++A GYSP + SPTF + P VY+ +L++++++ATL GGKK+ + KK IRV VS +M MR +P GVF ++AADM +++ DTDH+ +I LH LG+YPE +PRFYIHMVYRYY N+ H LA+E +VLR+PS+QK +D+ P+DC+G+ P EFR F++ S+G+ V ++PVPSKT AN+VVY ++FE +VPWVP +RA I ++F +L + FR++YP YL++G G E GNK V+ ALARSIEM DL + L G + +V T+ +LD+ + +D + ++ YN HPF GEQL ERLGF QDS+RGVFR A + S FC +Y+ L I T++ F E+C +K M ++ RDE WR FI+D +KIC I HA SR + F+ E G GD YL R+L L
Sbjct: 48 DNDFMGQSGDIVSIADLVEAMAFYATTMGYSPAA-WEPTPSPTFDNFARRPGVYKTLLKKIDNWATLNGGKKLSSVKKLIRVRVSDKMKTMREKPNALGVF-DNAADMATIYGDTDHESIIHSLHLLGKYPEKDPRFYIHMVYRYYMNEFHKQLANEDRVLRFPSMQKILDITKPIDCIGAIPAEFRTFVKSSRGNSVSTVTIPVPSKTNANDVVYTHNFEVSVPWVPVMRAMIFDLFVNL----NPRFREIYPKYLVRGEGGCEKGNKAVVAALARSIEMKDLVQTLQGTQSISVYTKDLLDQMLSIDSRVADIFPRYNSHPFLGEGEQLHERLGFLHQDSIRGVFRRIASKTSSEFCTEIYSGLRIEFKTIEVFREYCTTKTFMAFKRRDEGEWRQFIVDTRKICCILHAWSRKRDADEFVKEYGCGDRYLCRILGEL 481
BLAST of mRNA_P-littoralis_Contig15.66.1 vs. uniprot
Match: D8LPA2_ECTSI (EsV-1-70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPA2_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 2.650e-137 Identity = 213/440 (48.41%), Postives = 296/440 (67.27%), Query Frame = 1
Query: 1 ESDFMGPRGDIVSTSDLVRSMAYHAAAAGYSPELEYFEKVSPTFSDIEGSPDVYRDMLRRVESYATLAGGKKVVAAKKAIRVGVSARMAEMRGRPGGPGVFAEDAADMESLFADTDHKKVICKLHRLGRYPEDNPRFYIHMVYRYYTNDAHNALADEGKVLRYPSLQKTMDVKHPVDCVGSTPPEFRMFLRESKGHPVPVASLPVPSKTRANEVVYGYDFESAVPWVPAIRAKIHNMFADLKATGSQAFRQVYPGYLLKGAGR-ESGNKTVLDALARSIEMGDLARALDGIVNNAVATR-VLDRAILVDRGITEVVCSYNRHPFRSSGEQLRERLGFFLQDSVRGVF-RSAARRIPSFCEILYTSLGIPCVTMDAFDEFCRSKNAMNYRLRDEDAWRIFIIDLQKICFIFHARSRADEVSRFMSENGSGDGYLRRVLSTL 1311
++DFMG GDIVS ++LV +MA++A GYSP + +SPT + E P VY+ +LR+V+++ATL+G KK+++ KK IR+ VS +M ++R +P GVF + AADM ++ +T+ K I LH LG+YP+ +PRFYIHMVYRYY N+ HN LA E KVLR+PS QK +D P+DC+G+ P EFR F+R +G+ V + PVPSKT ANEVVY ++FE+ VPWVP +RA I+++F +L FR++YP YL++G G E GN ++ALARSIEM DL + L G+ + +V T+ +LDR + VD ++ YN HPF GEQLRERLGF QDSVRGVF R A++ FC +Y+ L I T++ F E+C +K M ++ RDE WR FI+D +KIC I HA SR +V F+ E G D Y+ R+L+ L
Sbjct: 48 DNDFMGESGDIVSIAELVEAMAFYATTMGYSPAA-WEPTLSPTLENFERRPGVYKTLLRKVDNWATLSGSKKLLSVKKLIRIRVSDKMKKVREKPNALGVF-DHAADMATIHGNTNPKSTINSLHLLGKYPDQDPRFYIHMVYRYYMNEYHNQLATEDKVLRFPSFQKILDTTKPIDCIGAIPAEFRTFVRGIRGNSVSTVTTPVPSKTNANEVVYTHNFEATVPWVPVMRAMIYDLFVNLNTR----FREIYPKYLVRGEGGCEKGNVAAVEALARSIEMADLVQTLTGVQSVSVYTKDLLDRMLAVDSRAADIFPRYNSHPFVGEGEQLRERLGFLHQDSVRGVFQRIASKSSSDFCTDIYSGLKIEFKTIEVFKEYCTTKTFMVFKRRDECEWRQFILDTRKICCILHAWSRKKDVDEFVEEYGCEDRYMCRILAEL 481
BLAST of mRNA_P-littoralis_Contig15.66.1 vs. uniprot
Match: B5LWD1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWD1_9PHYC) HSP 1 Score: 109 bits (272), Expect = 1.290e-22 Identity = 99/355 (27.89%), Postives = 160/355 (45.07%), Query Frame = 1
Query: 175 RRVESYATLAGGKKVVAAKKAIRVGVSARMAEMRGRPGGPGVFAEDAA-DMESLFADTDHKKVICKLHRLGRYPEDNPRFYIHMVYRYYTNDAHNALADEGKVLRYPSLQKTMDVKHPVDCVGSTPPEFRMFLRESKGHPVPVASLPVPSKTRANEVVYGYDFESAVPWVPAIRAKIHNMFADLKATGSQAFRQVYPGYLLKGAGRESGNKTVLDALARSIEMGDLARALDGIVNNAVATRVLDRAILVDRGITEVVCSYNRHPFRSSGEQLRERLGFFLQDSVRGVFRSAARRIPSFCEILYTSLGIPCVTMDAFDEFCRSKNAMNYRLRDEDAWRIFIIDLQKICFIFHARSR 1236
R VE T +G KK+ A+ ++ R+ + P + E A D L +D I LH G + R+Y+HMV+R+Y + H+ G VL +PS Q +D +P PPEFR FLR++ P +P+P K A EV Y +FE + RA I + S R VYP YL G+ S + +++ +A + ++ +++ + + +AV T LD+ + Y +H F SGEQL+ER GFF ++S +F A + E L+++ D F FC K ++ DE + R ++ + + F+ +R
Sbjct: 45 RLVEENLTASGLKKLSDAR------ITLRLRQECAERSTPSLETEALARDELDLTNSSDIDTFIKVLHSWGNCVIHDSRYYLHMVFRFYLKEYHDTARKLGLVLEHPSYQFILDSIYPSTSASKFPPEFRRFLRDN---PPRSPRVPLPLKRSATEVTYAENFEDRSE-ISTARASIQRIMHKW----SSERRCVYPEYLRPGS---SKSDFIVERVAYARKVDEVSSGMKKL--SAVCTIKLDKVVSQCPISATAHEEYMKHVFVQSGEQLKERFGFFSRESYHEIF--FAVKDHGIHEKLFSATSFDVGGYDNFKAFCTRKGRLS---NDEASVRKLLMTVVDVVFLLGCYNR 375
BLAST of mRNA_P-littoralis_Contig15.66.1 vs. uniprot
Match: Q6XM02_9PHYC (FirrV-1-B34 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM02_9PHYC) HSP 1 Score: 96.7 bits (239), Expect = 3.960e-18 Identity = 90/333 (27.03%), Postives = 149/333 (44.74%), Query Frame = 1
Query: 181 VESYATLAGGKKVVAAKKAIRVGVSARMAEMRGRPGGPGVFAEDAADMESLFADTDHKKVICKLHRLGRYPEDNPRFYIHMVYRYYTNDAHNALADEGKVLRYPSLQKTMDVKHPVDCVGSTPPEFRMFLRESKGHPVPVASLPVPSKTRANEVVYGYDFESAVPWVPAIRAKIHNMFADLKATGSQAFRQVYPGYLLKGAGRESGNKTVLDALARSIEMGDLARALDGIVNNAVATRV-LDRAILVDRGITEVVCSY--NRHPFRSSGEQLRERL-----GFFLQDSVRGVFRSAARRIPSFCEILYTSLGIPCVTMDAFDEFCRSKNAMNY 1155
+E T G KK++ K +IR+ V+ M E + P + +E D D + L + PED+P++Y+HMV+R+Y D H+ L ++G+V+ YPS Q +D+ +P D + PPEFR F++++ + P+P K A +V Y+FE A+P V R I +F K T YP YL G + G V + ++ + + ++ +VN T LD + + EV Y N F S +Q R + F+ G+ AR + +L + + D F+++C K + Y
Sbjct: 56 LEDRLTPRGLKKLLDLKISIRLRVAQDMREKQRTEAIPAM----TQPLEFPLDDADGFTTV--LQKWATMPEDDPKYYLHMVFRFYMKDYHDFLVNKGQVIFYPSYQTILDILYPSDAAIAFPPEFRAFMKDAHSRSLETPYTPLPVKGDAKKVSLQYNFE-ALPDVATQRRYIERVFDIWKQTSFCT----YPTYLCTG---KPGCGYVENQFIYFRKIKRVKKEMEKLVNFPRETLAKLDTLVCKYPLVHEVYLDYAKNSSQFSSERKQFRRIMLQKFRKHFVMCKELGIHSDLARHVVERNSLLSAAPVLDHALQD-FEKYCTKKIRVYY 373 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.66.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.66.1 >prot_P-littoralis_Contig15.66.1 ID=prot_P-littoralis_Contig15.66.1|Name=mRNA_P-littoralis_Contig15.66.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=435bp MGPRGDIVSTSDLVRSMAYHAAAAGYSPELEYFEKVSPTFSDIEGSPDVYback to top mRNA from alignment at P-littoralis_Contig15:164933..166249- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.66.1 ID=mRNA_P-littoralis_Contig15.66.1|Name=mRNA_P-littoralis_Contig15.66.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1317bp|location=Sequence derived from alignment at P-littoralis_Contig15:164933..166249- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:164933..166249- >mRNA_P-littoralis_Contig15.66.1 ID=mRNA_P-littoralis_Contig15.66.1|Name=mRNA_P-littoralis_Contig15.66.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1305bp|location=Sequence derived from alignment at P-littoralis_Contig15:164933..166249- (Pylaiella littoralis U1_48)back to top |