mRNA_P-littoralis_Contig15.50.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: Q8QNI1_ESV1K (EsV-1-96 n=2 Tax=root TaxID=1 RepID=Q8QNI1_ESV1K) HSP 1 Score: 343 bits (881), Expect = 1.210e-115 Identity = 177/298 (59.40%), Postives = 214/298 (71.81%), Query Frame = 1
Query: 1 MRMISRRERVTADDVKSVQRRPNVEVTKSTLVIPDVPRSPIVMWGYYNRGGGSEAIKSCLRWPSSSDARCHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYRTGFCGIVPPADVKNEIGPRPSPGITAVQSIVDADP---CP-APRAPPKGLGAGARGRRSAGMRRIESKRDEVLNNDFCTRLKKARLDPALMVRKKEADVSNTLVFSMGIEIKKRSR 882
MR I RERV ADD+KS+QR NV V +T+ IP+ P SPIV+WG ++ +K+CL+WP S D RCHNCAHFF+GVPVPLPVSRDDLR VYFCEG FCSWQCAKSFNMRETSPAGRGNRNMYI++LAYKTWIKL + D T++ ++TYC +RLHPA PR+ L EFGG MSIEEYR FCGI+PP+++ + P + V +D D CP R + + A A G RRI++ R++ NN F RLK+ARLDPA+M RKKE DVSNTL+ SMGIEIKKRSR
Sbjct: 1 MRNILHRERVEADDIKSIQRVSNVRVVNNTITIPNTPESPIVVWGRSFHEDDTDVVKACLQWPLSYDKRCHNCAHFFEGVPVPLPVSRDDLRHVYFCEGKFCSWQCAKSFNMRETSPAGRGNRNMYISVLAYKTWIKLKKSV-IDIETKQKMKTYCDYRLHPAAPRAKLQEFGGEMSIEEYRKDFCGIIPPSEIIEKTSPLLNIRRMCVLPFIDTDSAGSCPNVLRKSVQHIEATAP---FVGTRRIDTNREQEFNNSFVDRLKRARLDPAIMRRKKELDVSNTLLASMGIEIKKRSR 294
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: B5LWB1_9PHYC (Putative VLTF2 transcription factor n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWB1_9PHYC) HSP 1 Score: 178 bits (451), Expect = 1.450e-51 Identity = 104/243 (42.80%), Postives = 137/243 (56.38%), Query Frame = 1
Query: 160 EAIKSCLR--WPSSSDARCHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYRTGFCGIVPPADVKNEIGPRPSPGITAVQSIVDADPCPAPRAPPKGLGAGARGRRSAGMRRIESKRDEVLNNDFCTRLKKARLDPALMVRKKEADVSNTLVFSMGIEIKKRSR 882
+ I+ CL WP+S+D C +C H DGVPVPLP S D L+KVY C G FCSWQC K++NMR T PAGRGNRNMYIALLA++TW+K+ + DD R L+TY ++PA P +L FGG +I E+R G GIV P + +I P T Q + GL RR G R + +N FC +L KAR D ++M RKK NTL+ +MG+ ++ R +
Sbjct: 2 KVIQDCLSQDWPTSTDNLCQHCCHPIDGVPVPLPQSYDTLKKVYHCRGQFCSWQCVKAYNMRSTVPAGRGNRNMYIALLAHRTWVKV--RKNVDDFER--LRTYACTSINPAPPPESLRIFGGDKTIHEFRKGSFGIVHPEEATVDI-----PFATTRQRLS------------LGLDHNDDSRRVLGNRENSGVHNH--SNSFCAKLDKARTDKSIMKRKKRDSDKNTLMSTMGVVVETRKK 221
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: Q6XM22_9PHYC (FirrV-1-B14 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM22_9PHYC) HSP 1 Score: 164 bits (415), Expect = 5.550e-46 Identity = 73/131 (55.73%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 184 WPSSSDARCHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLV-HADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYRTGFCGIVPP 573
WP+S++ CHNC H FDGVPVPLP S D+ R+VY C+G FCSWQC K++N+++T G+G+RNMYIALLAYKTW KL H A + ++L+ Y + PA R NL FGG +SI+EYR GF GI+PP
Sbjct: 24 WPTSANVCCHNCCHPFDGVPVPLPYSYDERRRVYLCKGNFCSWQCVKAYNIQDTLVTGKGDRNMYIALLAYKTWYKLTAHTRLATNDGYQALKGYAYTSIQPAQSRENLQMFGGPLSIQEYRRGFFGIMPP 154
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: Q6XLU1_9PHYC (FirrV-1-I5 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLU1_9PHYC) HSP 1 Score: 160 bits (404), Expect = 3.330e-44 Identity = 67/133 (50.38%), Postives = 98/133 (73.68%), Query Frame = 1
Query: 184 WPSSSDARCHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYRTGFCGIVPPADV 582
WP +++ CHNC H F+GVPVPLP D+ ++VYFC G+FCSWQCAK++N++ +G+GNRNMYI+LLA+KTW+K++ + + ESL+TY ++ PA PR L FGG+ +I++YR GF GI+PP ++
Sbjct: 27 WPRRTESCCHNCCHPFEGVPVPLPYFYDERKQVYFCSGSFCSWQCAKAYNIQLPVSSGKGNRNMYISLLAHKTWVKIM-SKTSHGVPHESLKTYAFTKIDPAPPRETLHMFGGNKTIQQYREGFFGIIPPEEI 158
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: A0A1Y1IVF4_KLENI (MYM-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVF4_KLENI) HSP 1 Score: 82.0 bits (201), Expect = 1.370e-14 Identity = 50/128 (39.06%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 184 WPSSSDARCHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYRTGFCGIV 567
WP SDA C C H FD +P+PLPV D+ R V+ C GTFCS+ CAK+FN+ S + +R + L IK DA S ++ + A R +L FGG SIEE+R G +V
Sbjct: 5 WPLRSDAACWWCCHQFDTIPIPLPVHYDEARNVFQCMGTFCSFGCAKAFNLSRNSV--KRDRTCTLLTLFRNKVIK----KDASYPLWNSPDSF---GIRAAGDRYSLRLFGGPKSIEEFREGMDVLV 123
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: A0A6C0FAJ4_9ZZZZ (MYM-type domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0FAJ4_9ZZZZ) HSP 1 Score: 75.1 bits (183), Expect = 7.090e-12 Identity = 43/120 (35.83%), Postives = 57/120 (47.50%), Query Frame = 1
Query: 187 PSSSDARCHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYR 546
P+SS+ C C H F G P LP D+ R+ Y G FCSW C KS+NM + NRN + + K IK V A PR+ L+EFGGH++IE++R
Sbjct: 173 PTSSNLWCWWCCHKFSGPPCYLPTKYDEYRERYVVIGNFCSWSCVKSYNM-DIGDNSTNNRNFILRRILKKLEIKDVKN---------------------APPRTALLEFGGHLTIEKFR 270
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: A0A2E0WIW2_9CHLR (MYM-type domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E0WIW2_9CHLR) HSP 1 Score: 65.9 bits (159), Expect = 1.950e-9 Identity = 41/116 (35.34%), Postives = 58/116 (50.00%), Query Frame = 1
Query: 208 CHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGN---RNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYR 546
C C H F G P+ +P+ DD RK + G FCSW C KS+ + +T +G+ NM I + K + K G+ + PA PR +L+EFGG MSI+E+R
Sbjct: 4 CWWCCHDFKGTPLTMPLKYDDRRKTFTTSGRFCSWSCMKSYAL-DTKGLTQGSIVCGNMII--MRKKLFGKF--------GS-----------IKPAPPRQSLIEFGGMMSIDEFR 97
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: A0A0N7HVN3_9PHYC (MYM-type domain-containing protein n=5 Tax=unclassified Prasinovirus TaxID=880158 RepID=A0A0N7HVN3_9PHYC) HSP 1 Score: 63.5 bits (153), Expect = 1.830e-8 Identity = 35/113 (30.97%), Postives = 51/113 (45.13%), Query Frame = 1
Query: 208 CHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYR 546
C C H F+G P+ +P DD R ++ G FCSW C KS+ + + I L+ K + ++ H + PA R LVEFGG ++IEE+R
Sbjct: 24 CWWCCHTFEGTPLTVPHRYDDRRSKFYTAGNFCSWSCVKSYAIDKFGDVKGSIVCGNIVLMRRKMYNQIGH-------------------VKPAPNRFRLVEFGGDLTIEEFR 117
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: A0A1Y1IRN1_KLENI (Uncharacterized protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IRN1_KLENI) HSP 1 Score: 64.7 bits (156), Expect = 5.560e-8 Identity = 42/113 (37.17%), Postives = 58/113 (51.33%), Query Frame = 1
Query: 229 FDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYRTGFCGIV 567
FD +P+PLPV D+ R V+ C GTFCS+ CAK+FN+ S + +R + L IK DA S ++ + A R +L FGG SIEE+R G +V
Sbjct: 430 FDTIPIPLPVHYDEARNVFQCMGTFCSFGCAKAFNLSRNSV--KRDRTCTLLTLFRNKVIK----KDASYPLWNSPDSF---GIRAAGDRYSLRLFGGPKSIEEFREGMDVLV 533
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Match: A0A250XSF4_9CHLO (FCP1 homology domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XSF4_9CHLO) HSP 1 Score: 63.2 bits (152), Expect = 1.830e-7 Identity = 40/127 (31.50%), Postives = 57/127 (44.88%), Query Frame = 1
Query: 184 WPSSSDARCHNCAHFFDGVPVPLPVSRDDLRKVYFCEGTFCSWQCAKSFNMRETSPAGRGNRNMYIALLAYKTWIKLVHADDADDGTRESLQTYCRHRLHPALPRSNLVEFGGHMSIEEYRTGFCGI 564
WP S+ C+ C H FD P+ +PV + + G +CS CA + N NR+ +A + + A D G RE + PA PR L FGGHMSI+ +R+ CG+
Sbjct: 522 WPLSTSVLCYWCCHRFDSAPLGMPVRYVASLQKFLVTGCYCSLACAAAHNFEL-------NRHSPQECIARHALLNAL-AQVLDPGRREP--------VGPAPPRLALAAFGGHMSIDHFRS--CGV 630 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.50.1 >prot_P-littoralis_Contig15.50.1 ID=prot_P-littoralis_Contig15.50.1|Name=mRNA_P-littoralis_Contig15.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp MRMISRRERVTADDVKSVQRRPNVEVTKSTLVIPDVPRSPIVMWGYYNRGback to top mRNA from alignment at P-littoralis_Contig15:138813..139700+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.50.1 ID=mRNA_P-littoralis_Contig15.50.1|Name=mRNA_P-littoralis_Contig15.50.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig15:138813..139700+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:138813..139700+ >mRNA_P-littoralis_Contig15.50.1 ID=mRNA_P-littoralis_Contig15.50.1|Name=mRNA_P-littoralis_Contig15.50.1|organism=Pylaiella littoralis U1_48|type=CDS|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig15:138813..139700+ (Pylaiella littoralis U1_48)back to top |