prot_P-littoralis_Contig15.47.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.47.1
Unique Nameprot_P-littoralis_Contig15.47.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length93
Homology
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BLAST of mRNA_P-littoralis_Contig15.47.1 vs. uniprot
Match: Q8QNH6_ESV1K (EsV-1-102 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNH6_ESV1K)

HSP 1 Score: 94.7 bits (234), Expect = 2.000e-23
Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 0 
Query:    1 MSKDSTTHAPLIPMSEIFMPGTGTDESEDHDHA---------GSNGHALSLIESEISHLTGVQATNNDEIKKRLTEIQALRESNLVVAGALGGLRKIKDKL 92
            M++D +THAPLIPMSE+F  G+ T+ES D              S  + L +IE E+  L  +Q +NN+EIKKRLTEIQ+ RE+NLVV GA+GGL+KI++K+
Sbjct:    1 MNEDVSTHAPLIPMSEMF--GSNTNESSDSRQPMGQQKSLQKASLAYVLEIIEKELGSLAKIQTSNNEEIKKRLTEIQSFRENNLVVVGAIGGLKKIREKI 99
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BLAST of mRNA_P-littoralis_Contig15.47.1 vs. uniprot
Match: D8LPD3_ECTSI (EsV-1-102 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPD3_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.330e-21
Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 0 
Query:    1 MSKDSTTHAPLIPMSEIFMPGTGTDESEDH---------DHAGSNGHALSLIESEISHLTGVQATNNDEIKKRLTEIQALRESNLVVAGALGGLRKIKDKL 92
            M+ + +TH PLIPMSE+F  G+ T+E+ D              S  + L +IESE+  L  VQ +NN+EIKKRLTEIQ+ RESNLVV GA+ GL+KI++K+
Sbjct:    1 MNDNVSTHTPLIPMSEMF--GSNTNETSDSRQPMEQQKSSQRASLKYVLEIIESELDSLAKVQTSNNEEIKKRLTEIQSFRESNLVVVGAISGLKKIREKI 99
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNH6_ESV1K2.000e-2350.50EsV-1-102 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPD3_ECTSI1.330e-2149.50EsV-1-102 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:133875..134312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.47.1mRNA_P-littoralis_Contig15.47.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 133875..134312 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.47.1 ID=prot_P-littoralis_Contig15.47.1|Name=mRNA_P-littoralis_Contig15.47.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=93bp
MSKDSTTHAPLIPMSEIFMPGTGTDESEDHDHAGSNGHALSLIESEISHL
TGVQATNNDEIKKRLTEIQALRESNLVVAGALGGLRKIKDKL*
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