mRNA_P-littoralis_Contig15.25.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: D8LPG5_ECTSI (EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI) HSP 1 Score: 268 bits (684), Expect = 7.470e-88 Identity = 140/253 (55.34%), Postives = 161/253 (63.64%), Query Frame = 1
Query: 25 VGQGRTS--WVSPNPRANPTDYDKDFPWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRRHDT-----------------------------------------------------------------------VVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITLLS 564
+G+GR + +VS + + + DY+ +FPWFWID+ETTGLDTDTNLILEIV+VVTDRDL E+DSMRLVLHHPHSIL+ARSSAWCR+KFCHR EGGNGLF CH SALSHHEAEYRMWNFFDHYS+D G R+DT VVDVSTPLEMVRRWRPD+A ++P RNG+HRAYDDI DSISLMKFFK T L+
Sbjct: 16 IGKGRRNKTFVSRDFKTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILLARSSAWCRRKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTTQITSSQPFFDRTLGANGTFLGASDASRCRHQQQPRRSNYKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKETFLN 268
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: B5LWG6_9PHYC (Putative oligoribonuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG6_9PHYC) HSP 1 Score: 127 bits (320), Expect = 3.980e-33 Identity = 58/101 (57.43%), Postives = 75/101 (74.26%), Query Frame = 1
Query: 82 YDKDFPWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYS 384
YD++ PWFWID+ET+ LD T+ +LEI IVVTD L DS+ +V+HHP +ILM +SS WC++KFC RS GGNGLF DCH S S +A + M NFF++YS
Sbjct: 17 YDRNNPWFWIDIETSSLDFSTSDVLEIAIVVTDSGLNVWDSLHVVIHHPINILMLKSSNWCKEKFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYS 117
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A7M7JVU5_VARDE (Exonuclease domain-containing protein n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7JVU5_VARDE) HSP 1 Score: 100 bits (249), Expect = 1.150e-22 Identity = 68/200 (34.00%), Postives = 104/200 (52.00%), Query Frame = 1
Query: 34 GRTSWVSPNPRANPTDYDKDFPWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSM-RLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHY-----------SEDAGRR-------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITL 558
G ++ +PN + P+D D+ WID+E TGLD D + I+EI VVTD+DL E+ + +++LH P +L A WC++ + G +GL C S +S EAE + F + S A R+ H ++DVS+ E+ +RW PD++ P AHRAY+DIR SI +++F+ TL
Sbjct: 50 GPMNFNTPNDKIMPSDIDQRI--CWIDMEMTGLDPDRDTIMEISCVVTDKDLNEVARIEQIILHQPEYVLNAMDD-WCKQ-----NHGASGLTEACLKSKISLKEAEDTVLVFLQRHTTPKKVPLGGNSVHADRQFIRRYMPKVYEHLHYRIIDVSSIRELCKRWYPDVSENEPKIKKAHRAYEDIRQSIQQLQYFRKTL 241
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: UPI00035A2ADF (probable oligoribonuclease isoform X1 n=3 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A2ADF) HSP 1 Score: 98.6 bits (244), Expect = 1.430e-21 Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 1
Query: 106 WIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSED------------------------AGRRHDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKI 552
WIDLE TGLD D++ ILEI +VT+ DL + + L++H + +L WC ++ G +GL S +S H+AE ++ F ++ A H +VDVST E+ RRW P+L +R+P +N +HRA DDIR+SI +KF+K+
Sbjct: 116 WIDLEMTGLDVDSDTILEIACIVTEGDLALVAEGPSLIIHQENEVL-ENMGEWCTEQ-----HGKSGLTESVRNSKISLHQAEEQVLEFVKQHTPSGVCPIAGNSVGKDKQFLERYMPRLASHFHYRIVDVSTIKELCRRWYPNLEKRLPSKNLSHRALDDIRESIEELKFYKM 283
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A3P7PK89_9BILA (Exonuclease domain-containing protein n=3 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A3P7PK89_9BILA) HSP 1 Score: 94.0 bits (232), Expect = 5.770e-21 Identity = 52/149 (34.90%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 106 WIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRRHDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFK 549
W+D E TGLD +T I+E+ VVT+ DL + D + +V+ HP ++L + S WC+K F NGL + S +S +AE + A H +DVS+ E+ +RW PD+ + P + AHRA DDI +SI +++++
Sbjct: 17 WVDCEMTGLDVNTKTIVEVACVVTEADLTVVEDGLNVVISHPENVLQSMDS-WCKKTFA-----ANGLLKEIQASEISLEQAEQEKY-----MPTFASHLHYRTIDVSSIKELAKRWYPDIYAKRPRKAEAHRALDDICESIEELQWYR 154
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A482V8A7_9CUCU (Oligoribonuclease n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482V8A7_9CUCU) HSP 1 Score: 94.0 bits (232), Expect = 3.000e-20 Identity = 59/175 (33.71%), Postives = 90/175 (51.43%), Query Frame = 1
Query: 106 WIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSED-----AGRR-------------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKIT 555
W+D+E TGLD T+ I+E+ +VTD +L + + +V+HHP ++L S WC+K+ GL C S ++ +EAE ++ F Y + AG H ++DVST E+ RRW P+L R IP + +HRA DIR+SI +K++K T
Sbjct: 61 WVDMEMTGLDIQTDKIMEVACIVTDSNLNIIAEGPNIVIHHPRNVL-DNMSEWCKKQ-----HAKTGLTEACLNSNVTLNEAENKLMAFVTKYVTENVSPLAGNSVYMDRLFLRKYMPRLDEYLHYRIIDVSTIKELCRRWNPNLYRDIPKKEFSHRALADIRESIDELKYYKNT 229
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A1Y1R7A4_9GAMM (Oligoribonuclease n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A1Y1R7A4_9GAMM) HSP 1 Score: 88.2 bits (217), Expect = 1.540e-18 Identity = 60/173 (34.68%), Postives = 87/173 (50.29%), Query Frame = 1
Query: 106 WIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSMRLV-LHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHY-----------SEDAGRR-------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFK 549
WIDLE TGL+ DT+ ILE ++TD +L E+ ++ +H P S+L A WC K + G GL S +S EAE + +F Y S RR H +DVST E+ RRWRPD+ + + G+H+A DDIR+SI+ M++++
Sbjct: 9 WIDLEMTGLNPDTDRILEFATIITDGELNELAVGPVIAVHQPDSVLNAMDD-WCIK-----THGQTGLTDRVRKSTISEQEAEKQTLDFIRQYVDPRVSPMCGNSIGQDRRFLHRFMRDLHDYFHYRNIDVSTVKELARRWRPDVFNGV-VKAGSHKALDDIRESIAEMRYYR 174
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A0H5R6R7_9EUKA (Exonuclease domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R6R7_9EUKA) HSP 1 Score: 89.0 bits (219), Expect = 2.450e-18 Identity = 60/181 (33.15%), Postives = 86/181 (47.51%), Query Frame = 1
Query: 97 PWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRR-------------------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITLL 561
P WID E TGLD +++ ILEI +V+TD DL + + LV+HH +L A WC H E +GL S L+ AE + +F ++ G+ H ++DVS+ E+ RRW P + R P + HRA DDIR+SI +K++K LL
Sbjct: 46 PMIWIDCEMTGLDIESDTILEIAVVMTDSDLNRVIEGPDLVIHHSDKVLNAMGE-WC---ITHHGE--SGLTDKVRASTLTMTAAEDEIMSFVTKWATKPGQTPLAGNTVHCDRMFLKKFMPRLDQYMHYRIIDVSSFKEICRRWNPGVFSRAPKKALLHRALDDIRESIEELKYYKAHLL 220
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A0V0R1R0_PSEPJ (Ribonuclease H-like domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R1R0_PSEPJ) HSP 1 Score: 87.0 bits (214), Expect = 4.780e-18 Identity = 56/176 (31.82%), Postives = 86/176 (48.86%), Query Frame = 1
Query: 97 PWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHY------------SEDAGRR-------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFK 549
P W+DLE TGLD +TN I+EI ++VTD +L++ ++ ++ + AWC K + G +GL C S +S +AE ++ +F + S RR H ++DVST E+ RRW P+ + P + HRA DDI +SI +KF+K
Sbjct: 10 PIVWVDLEMTGLDHNTNQIMEIAVLVTDGNLEQTIEGPEIIVKAEKQVLEKMDAWCTK-----THGESGLTQKCLESKISIEQAEKQVLDFLKNLNINKFEAQLGGNSVHMDRRFINKYMPQLDDFLHYRIIDVSTIKELARRWYPEEMEKKPVKKLCHRALDDIIESIEELKFYK 180
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A0M3IY33_ANISI (Probable oligoribonuclease (inferred by orthology to a C. elegans protein) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3IY33_ANISI) HSP 1 Score: 87.4 bits (215), Expect = 6.220e-18 Identity = 59/180 (32.78%), Postives = 86/180 (47.78%), Query Frame = 1
Query: 106 WIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRR-------------------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITLLSC 567
WID E TGLD + N I+EI +VT+ DL + + LV++ P +L + S WC+ F NGL S ++ AE ++ F ++E AG+ H VDVST E+V+RW P IP + AHRA DDI++SI +K++K + C
Sbjct: 37 WIDCEMTGLDVNVNRIVEIACIVTEADLSIVSEGPDLVINQPEDVL-SNMSDWCKTTF-----KMNGLTERIRASNINTENAESQVLTFLKRHTE-AGQSVLAGNSVYMDRIFINKYMPNLGAHLHYRTVDVSTVKELVKRWNPLAYTLIPRKKNAHRALDDIKESIEELKWYKANIFKC 209 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.25.1 >prot_P-littoralis_Contig15.25.1 ID=prot_P-littoralis_Contig15.25.1|Name=mRNA_P-littoralis_Contig15.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=190bp MGTGQGPEVGQGRTSWVSPNPRANPTDYDKDFPWFWIDLETTGLDTDTNLback to top mRNA from alignment at P-littoralis_Contig15:102553..103326+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.25.1 ID=mRNA_P-littoralis_Contig15.25.1|Name=mRNA_P-littoralis_Contig15.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=774bp|location=Sequence derived from alignment at P-littoralis_Contig15:102553..103326+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:102553..103326+ >mRNA_P-littoralis_Contig15.25.1 ID=mRNA_P-littoralis_Contig15.25.1|Name=mRNA_P-littoralis_Contig15.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=570bp|location=Sequence derived from alignment at P-littoralis_Contig15:102553..103326+ (Pylaiella littoralis U1_48)back to top |