mRNA_P-littoralis_Contig15.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI) HSP 1 Score: 647 bits (1669), Expect = 1.530e-233 Identity = 324/342 (94.74%), Postives = 330/342 (96.49%), Query Frame = 1
Query: 19 LRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHSEADVFSKKRSRLCHGRIYDHHRHGPIFSDKLT 1044
L TSSLFY LTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGY+TRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLR VRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFK T+PFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKV+YASRWRVEES KR KSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKS+KEPSYIYTLDTYVTHILNNVKRVSNPVKLSAH E +V SKKRSR HGRIYDHHRHGP FSD+LT
Sbjct: 27 LDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYVTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRCVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTRPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESLKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSIKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHCETNVLSKKRSRF-HGRIYDHHRHGPFFSDELT 367
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI) HSP 1 Score: 557 bits (1435), Expect = 5.580e-198 Identity = 279/317 (88.01%), Postives = 292/317 (92.11%), Query Frame = 1
Query: 19 LRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHSEADVFSK 969
L TSSLFY LTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKI+AFK T+ FFNSC TEA CLILG+ ARLLKYFI GKTYVCLTND SLSRRDIK +YASRWRVEESFKR KSNL+LEKAHA+TP LYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VT+IL NVKRVS P + AD+ +K
Sbjct: 27 LDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSGPSRYKCPGVADLKAK 343
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE) HSP 1 Score: 525 bits (1353), Expect = 7.940e-180 Identity = 266/344 (77.33%), Postives = 293/344 (85.17%), Query Frame = 1
Query: 25 TSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHSEADVFSKKRSRLCHGR------IYDHHRHGPIFSDK 1038
TSSLF+ LT+CC+Q RGV+H+L+ME+E YSSQA+HSARKKLP GAFKEVNRFL RGPHEPRVFAVDGSKVHVHPSFI +GY TRTN++PV RPAKRPLVMLSSMVDVKTKAC+DFELTKHFNER+AAT MLR VRKGDTL+FDRGYYSK+LLRSVHDSHAFGVWRLKI+AFK T+ FFNSC TEA CLILG+ ARLLKYFI GKTYVCLTND SLSRRDIK +YASRWRVEESFKR KSNLKLEKAHAKTPALYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VTHIL NVKRVS+P + A++ SK H R I D R FSD+
Sbjct: 44 TSSLFFTLTRCCVQGRGVSHVLKMEDEAYSSQAVHSARKKLPIGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINSGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVRKGDTLLFDRGYYSKDLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVSSPTRYKFLRVAELESKTPFGRMHYRPSDTDIIIDFARREKDFSDR 387
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K) HSP 1 Score: 506 bits (1304), Expect = 1.020e-177 Identity = 251/315 (79.68%), Postives = 279/315 (88.57%), Query Frame = 1
Query: 25 TSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHSEADVFSK 969
TSSLFY LT+CC+Q RGV H+L+ME+E YSSQA+HSARKKLP GAFKEVNRFL RGPHEPRVFAVDGSKVHVHPSFI AGY TRTN++PV RPAKRPLVMLSSMVDVKTKAC+DFELTKHFNER+AAT MLR V+KGDTL+FDRGYYSK+LL SVH SHAFGVWRLKI+AF+ T+ FFNSC TEATCLILGV+ARLLKYFI GKTYVCLT D SLSR IK +YASRWRVEESFKR KSNL+LEKAHA+TP LYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VT+IL NVKRVS+P + AD+ +K
Sbjct: 29 TSSLFYTLTRCCVQGRGVNHVLKMEDEAYSSQAVHSARKKLPMGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINAGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVQKGDTLLFDRGYYSKDLLHSVHGSHAFGVWRLKIDAFRGTRSFFNSCRTEATCLILGVKARLLKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSSPSRYKCLGVADLKAK 343
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE) HSP 1 Score: 468 bits (1204), Expect = 8.960e-157 Identity = 236/301 (78.41%), Postives = 259/301 (86.05%), Query Frame = 1
Query: 19 LRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVS 921
L TSS+FY +TKCC +ERGV+H+L+ME E+YSSQA+H ARKKLP GAFKEVNRFL RGPHEPR+FA+DGSKVHVHPSFI AGY TRTN+KPVPRPAKRPLVMLSSMVDV+TK+C+DFELTKHF+ER+AA MLR VRK DTL+FDRGYYSK+LLRSVHDS AFGVWRL+I CLILGVR RLLKYFI GKTYVCLTND SLSRRDIK +YA RWRVEESFKR KSNLKLEKAHAKTPALYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VTHIL NVKRVS
Sbjct: 27 LDTSSVFYTITKCCTRERGVSHVLKMEAEEYSSQAVHLARKKLPIGAFKEVNRFLHRGPHEPRIFAIDGSKVHVHPSFIKAGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKSCIDFELTKHFDERRAAVSMLRSVRKSDTLLFDRGYYSKDLLRSVHDSGAFGVWRLRI----------------MPCLILGVRVRLLKYFIKGKTYVCLTNDPSLSRRDIKTMYAWRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVS 311
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE) HSP 1 Score: 356 bits (914), Expect = 8.730e-121 Identity = 189/250 (75.60%), Postives = 205/250 (82.00%), Query Frame = 1
Query: 94 MENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQK 843
M NEQYSSQAIH ARKKLP GAFKEVNRFL +GPHEPRVFAVDGSKVHVHPSFIGAGY TRTN+KPVPRPAK PLVMLSSMVDVKTKACVDFELTKHFNE + R Y K LRS+HDS AFGVWRLKINAFK TK F +S TE TCLILGV++RL+KY I+GKTYVCLTND +LSRRDIK +YASRWR E+S R KSN++LEKAHA+TP LYIQEVEARVLLDTITLRLQ+
Sbjct: 1 MGNEQYSSQAIHLARKKLPVGAFKEVNRFLHQGPHEPRVFAVDGSKVHVHPSFIGAGYKTRTNDKPVPRPAKSPLVMLSSMVDVKTKACVDFELTKHFNEDGS-----------------RIYTQK--LRSIHDSQAFGVWRLKINAFKGTKSFISSWRTETTCLILGVQSRLVKYSINGKTYVCLTNDPTLSRRDIKAIYASRWRGEQSL-RLKSNVRLEKAHARTPDLYIQEVEARVLLDTITLRLQR 230
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: A0A6H5K4T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE) HSP 1 Score: 147 bits (370), Expect = 2.200e-37 Identity = 88/161 (54.66%), Postives = 95/161 (59.01%), Query Frame = 1
Query: 25 TSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAF 507
TSSLFY LTK CIQERGV HILR ++EQYSSQA+HSARKKLP GAFKE PVPRPA RPLVMLSSMVD TK FNERKA MLR V +GDTLVFD+ YYS+ LLR+VHDS AF
Sbjct: 183 TSSLFYTLTKRCIQERGVGHILRTDDEQYSSQAVHSARKKLPAGAFKE----------------------------------------PVPRPATRPLVMLSSMVD-----------TKLFNERKADVSMLRSVHQGDTLVFDKEYYSRGLLRNVHDSKAF 292
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: A0A2Z2NHE4_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2NHE4_9GAMM) HSP 1 Score: 110 bits (274), Expect = 8.780e-23 Identity = 84/268 (31.34%), Postives = 128/268 (47.76%), Query Frame = 1
Query: 112 SSQAIHSARKKLPPGAFKEVN-RFLQRGPHEP-------RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLIL-------------------GVRARLLKYFISGKTYVC---LTNDLSLSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTI 825
++ A +AR KL FK + + LQ+ +P R+ AVDGSK+++ I AGY T ++N A P +S + ++KTK +DF+L H +ERK A L + + D +V+DRGYYS ++L H ++RLK A + + F NS +A I + RL+KY G +Y+ L + S + VY SRW VEE +K K +K+E HA++ QE+ A L T+
Sbjct: 398 AASAFCNARAKLDEEVFKLLQVQILQQAKPDPKKLWQGHRLMAVDGSKLNLPRQLIRAGYKTPSDN------AHYPQGTVSCLYELKTKIPIDFDLASHRDERKMAISHLNSLSETDVVVYDRGYYSYDMLHEHDKRHIHPIFRLKTTACRVVEAFANSDDIDAVVQIFPSQSKRTSIPAHDPQPDYPALALRLVKYDAGGTSYILGTTLWDQKKYSIEQLSAVYHSRWGVEELYKISKQLMKVEDFHAQSERGVKQELFAHFNLITL 659
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: A0A6L8GGC8_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GGC8_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 2.510e-16 Identity = 78/264 (29.55%), Postives = 125/264 (47.35%), Query Frame = 1
Query: 121 AIHSARKKLPPGAFKEVNR-FLQRGPHEP-----RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLILG---VRARL---------------LKYFISGKTYVCLTNDLS----LSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTIT 828
A+ AR K+ P F+E++R L + P P RVF VDG+K+++ + AGY T ++ A P ++S + +++ + DF L +ER+AA E L+ + GD +V+DRGY+S +L + V+RLK +A T F + T I RARL L + +G T L L+ D+ +Y +RWR+EE +K K L +E A++ +QE+ A ++ T T
Sbjct: 379 AMSRARAKVDPEVFRELHREILAQAPDRPLWKGRRVFGVDGAKINLPRPLVEAGYATPGDH------AHYPQGLVSCLYELEPRLPFDFGLHADTSERRAAAEHLKALSAGDVVVYDRGYFSYEMLLAHVVRGQDAVFRLKRDANAETVAFLAGPLDDRTVEIRPDDKARARLKARHPGAAFGPLKLRLVRYAAGDTVFALGTTLAEDDGFGLEDLAAIYRARWRIEEHYKIAKWFLAVESFRAESERGVLQELYANFVMVTAT 636
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Match: A0A6L8GJ11_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GJ11_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 6.530e-15 Identity = 77/273 (28.21%), Postives = 123/273 (45.05%), Query Frame = 1
Query: 97 ENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEP------RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRP-AKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKCTKPFFNSCHTEATCLILG-------------------VRARLLKYFISGKTYVCLTNDLS---LSRRDIKVVYASRWRVEESFKR*KSNLKLEKAHAKTPALYIQEVEARVLLDTIT 828
+ E + +I AR+++ F +++R + R + RVFAVDG+K+++ + AGY P+P+ A P ++S + + TK VDF L+ ER AA L + GD +VFDRGY+S LL +V + A V+RL+ N + F TEA V RL++ G + T L +S D+ +Y RW +EE +K K + +++ H +T QE+ A L +T
Sbjct: 393 QREPVVASSICKARQRVHEELFLDLHREILRHGGDGARWKGRRVFAVDGTKMNLPRGLVDAGY-------PLPKDGAHYPQGLVSCLYRLDTKVPVDFSLSARACERTAALGHLHALEAGDVVVFDRGYFSFELLHAVIRTGAHPVFRLQANGVAAFRDFMAGDGTEAVVAASPGPDTRRELARRRPGERFDPVDVRLVRCRTGGDGFNLATTLLDADDVSADDLGALYQGRWSIEELYKVSKQTVAVDEFHGRTERGVRQELYAHFNLIAMT 658 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.3.1 >prot_P-littoralis_Contig15.3.1 ID=prot_P-littoralis_Contig15.3.1|Name=mRNA_P-littoralis_Contig15.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=245bp MLKLTTLRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPback to top mRNA from alignment at P-littoralis_Contig15:18841..19884+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.3.1 ID=mRNA_P-littoralis_Contig15.3.1|Name=mRNA_P-littoralis_Contig15.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1044bp|location=Sequence derived from alignment at P-littoralis_Contig15:18841..19884+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:18841..19884+ >mRNA_P-littoralis_Contig15.3.1 ID=mRNA_P-littoralis_Contig15.3.1|Name=mRNA_P-littoralis_Contig15.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=735bp|location=Sequence derived from alignment at P-littoralis_Contig15:18841..19884+ (Pylaiella littoralis U1_48)back to top |