mRNA_P-littoralis_Contig1495.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1495.1.1
Unique NamemRNA_P-littoralis_Contig1495.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: D7FWM8_ECTSI (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM8_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 9.760e-80
Identity = 131/139 (94.24%), Postives = 132/139 (94.96%), Query Frame = 1
Query: 1147 DFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLEMTQKP 1563
            DFIKEYQLDC YA DRLVKYGVPA VLH QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDY GT KTREWLVTLNAMRAA+ELSEDQARQLLHDLDTSYS FFRYLEMTQKP
Sbjct:   95 DFIKEYQLDCPYAMDRLVKYGVPATVLHRQVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYEGTQKTREWLVTLNAMRAADELSEDQARQLLHDLDTSYSAFFRYLEMTQKP 233          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A836CDG2_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG2_9STRA)

HSP 1 Score: 185 bits (470), Expect = 3.360e-50
Identity = 90/134 (67.16%), Postives = 105/134 (78.36%), Query Frame = 1
Query: 1144 SDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
            S FI E+Q+D  YA +RLVKYGVPA VLH   DE D I RARQAAETTQCFITAMDALKL+QRAVDEVQPLI D+ DRLNK +GLP  + G    R WL+T N +RA+++L ++Q RQLLHDLD SYS FFR+L
Sbjct:  106 SAFIVEFQMDVPYAMERLVKYGVPATVLHRNHDEHDAISRARQAAETTQCFITAMDALKLDQRAVDEVQPLISDVMDRLNKCEGLPEGFEGVKTMRAWLITFNGLRASDQLDDEQVRQLLHDLDVSYSAFFRFL 239          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A6S9EJI3_HETAK (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EJI3_HETAK)

HSP 1 Score: 160 bits (405), Expect = 3.880e-41
Identity = 85/137 (62.04%), Postives = 101/137 (73.72%), Query Frame = 1
Query: 1144 SDFIKEYQL-DCHYATDRLVKYGVPAAVLH*QVDERDQIG-RARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 1548
            S FI  + L DC  A +RL+ YGVPA V+H   D +  +  +ARQAAE TQ FITAMDALKLEQRAVDEVQPL+ D+ DRL ++  LP D+A T K   WL  LN +RAA+EL EDQARQLLHDLD +YSGFFR+LE
Sbjct:  100 SSFIAAWGLGDCALAAERLLTYGVPATVVHRSGDGQAGLALQARQAAEATQAFITAMDALKLEQRAVDEVQPLVADVMDRLTRLAALPADFAPTQKIEAWLKELNGLRAADELGEDQARQLLHDLDAAYSGFFRFLE 236          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A7S1FP92_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP92_9STRA)

HSP 1 Score: 145 bits (365), Expect = 7.250e-36
Identity = 74/136 (54.41%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 1144 SDFIKEYQLDCHYATDRLVKYGVPAAVLH*-QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 1548
             +FI+EYQ++C  A DRL++ GVPA  LH  Q +E      A + AE  Q FITAMDALKL+QRAVDEVQPL+ DL D L +V GLP ++      + WL+ LNAMRA +E+ EDQARQL  +LDT+Y+GF R+L+
Sbjct:   84 EEFIQEYQMECPRAVDRLLRTGVPATTLHQTQANEGAASNEAVRVAECVQHFITAMDALKLDQRAVDEVQPLLSDLMDSLTRVSGLPANFDPVDMLKRWLIKLNAMRAVDEIDEDQARQLSFELDTAYAGFHRFLK 219          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A812XGV8_SYMMI (Vps28 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XGV8_SYMMI)

HSP 1 Score: 142 bits (359), Expect = 1.520e-34
Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 1150 FIKEYQLDCHYATDRLVKYGVPAAVLH*QVDER-DQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
            F++EY +DC  A DRL++ GVPA V+H   D+R D +      AET Q FITAMDALKLEQRAVDEVQPL+ +L   L +V GLP D+ G  K R WL  LN MRA EELS+++ARQL+ DL+ +YS F RYL
Sbjct:  132 FMREYNIDCPRAYDRLIRAGVPATVMHMSHDDRADSV----IVAETVQAFITAMDALKLEQRAVDEVQPLLAELMSALTRVAGLPADFEGLVKMRLWLQKLNQMRAVEELSDEEARQLIFDLEGAYSAFHRYL 260          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: W7T9L8_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9L8_9STRA)

HSP 1 Score: 140 bits (353), Expect = 5.010e-34
Identity = 71/133 (53.38%), Postives = 95/133 (71.43%), Query Frame = 1
Query: 1150 FIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 1548
            F+ EY +DC  A +RL++ GVP+ VL+  VD  D  G A + AET Q FITAMD ++LEQRAVDE+QP++ D+   L +V GLP ++ G+ K  EWLVTLNAMRA + ++E+QARQLL DLD  YS F  +L+
Sbjct:  108 FMTEYHMDCPRAVERLLRLGVPSTVLNPSVD--DGRGDAIKVAETVQYFITAMDGVRLEQRAVDELQPMLTDIMTSLRRVQGLPAEFLGSKKLEEWLVTLNAMRAMDAITEEQARQLLFDLDQGYSSFHAWLK 238          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A507E1G2_9FUNG (Vacuolar protein sorting-associated protein 28 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E1G2_9FUNG)

HSP 1 Score: 130 bits (326), Expect = 1.480e-30
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 1141 LSDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
            ++ F++EY+L C  AT RL++ GVPA V H   D     G A+  AET Q FIT MD+LKL   AVD++ P + DL   LN +  LP DY G  K R+WL+TLN M+A++E+++DQ RQLL DL+++ + F R L
Sbjct:   89 VNAFMREYKLTCPAATRRLLEIGVPATVEHATTDSTSSGGVAKHVAETVQVFITLMDSLKLNYVAVDQIHPQLSDLIQSLNSIPSLPTDYVGKGKIRDWLITLNKMKASDEINQDQVRQLLFDLESALTEFHRSL 223          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: E9LD18_BREAA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Breviata anathema TaxID=81100 RepID=E9LD18_BREAA)

HSP 1 Score: 129 bits (324), Expect = 1.690e-30
Identity = 64/136 (47.06%), Postives = 91/136 (66.91%), Query Frame = 1
Query: 1141 LSDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 1548
            +S F+ EY ++C  A  RL++ GVPA       D   Q+ + +  AET Q FITAMD+LKL   AVDE+QP+I+DL D +N++ GLP  Y G  K + WL+T+N M+A+++L+EDQ RQ+  DLD +Y GF R L+
Sbjct:   72 ISKFMDEYHMNCPAARKRLLEVGVPATTEF-GGDTSKQVDQGKAIAETVQHFITAMDSLKLNMVAVDELQPIIHDLMDSINRIVGLPESYDGIEKIKYWLLTMNKMKASDQLNEDQQRQMTFDLDQAYHGFHRCLQ 206          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: W2JRS1_PHYPR (Vacuolar protein sorting-associated protein 28 homolog n=23 Tax=Phytophthora TaxID=4783 RepID=W2JRS1_PHYPR)

HSP 1 Score: 130 bits (326), Expect = 1.930e-30
Identity = 67/136 (49.26%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 1138 GLSDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
             +  FI EY+LDC  A +RLV+ GVPA V+H   + +     +   A+T Q FIT MD LKL  RAVDE+QPL+ ++   L  V GLP D+AG  K   WL T+N+MRA+EEL E+QARQL  DL+ +YS F  +L
Sbjct:  101 SVESFIAEYRLDCPRALERLVRIGVPATVVHNTTNRKTD---SVNVAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMSSLTMVSGLPPDFAGRDKIEGWLRTMNSMRASEELDEEQARQLSFDLERAYSSFMAFL 233          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A7S4U5V2_9EUKA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4U5V2_9EUKA)

HSP 1 Score: 129 bits (323), Expect = 3.110e-30
Identity = 66/138 (47.83%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 1135 FGLSDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGR-ARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
            F L  F+++Y L+C YA  RLV+ G+PA + H    +    G  A   A+ TQ +ITAMDALKL+  AVDE+QP + DL + LNK+  LP D+ G  K R WL  LN M A+ +LS++  RQLL DLD+SY+ F R+L
Sbjct:   79 FNLDSFVRDYNLECTYALSRLVQKGIPATIEHNTDPDPTPTGNIAVLVAQATQNYITAMDALKLDMTAVDEIQPQLNDLFESLNKIPDLPPDFEGKTKLRTWLGILNGMGASVKLSDEDTRQLLFDLDSSYNSFHRFL 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWM8_ECTSI9.760e-8094.24Vacuolar protein sorting-associated protein 28 hom... [more]
A0A836CDG2_9STRA3.360e-5067.16Vacuolar protein sorting-associated protein 28 hom... [more]
A0A6S9EJI3_HETAK3.880e-4162.04Vacuolar protein sorting-associated protein 28 hom... [more]
A0A7S1FP92_9STRA7.250e-3654.41Vacuolar protein sorting-associated protein 28 hom... [more]
A0A812XGV8_SYMMI1.520e-3457.14Vps28 protein n=1 Tax=Symbiodinium microadriaticum... [more]
W7T9L8_9STRA5.010e-3453.38Vacuolar protein sorting-associated protein 28 hom... [more]
A0A507E1G2_9FUNG1.480e-3047.41Vacuolar protein sorting-associated protein 28 n=1... [more]
E9LD18_BREAA1.690e-3047.06Vacuolar protein sorting-associated protein 28 hom... [more]
W2JRS1_PHYPR1.930e-3049.26Vacuolar protein sorting-associated protein 28 hom... [more]
A0A7S4U5V2_9EUKA3.110e-3047.83Vacuolar protein sorting-associated protein 28 hom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1495contigP-littoralis_Contig1495:982..4226 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWM8
Preferred nameVPS28
PFAMsVPS28
Model size2185
Max annot lvl2759|Eukaryota
KEGG koko:K06002,ko:K12184
KEGG Pathwayko04144,ko04974,map04144,map04974
KEGG ModuleM00409
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000813,GO:0001654,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006914,GO:0006996,GO:0007010,GO:0007032,GO:0007034,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0007399,GO:0007423,GO:0008104,GO:0008150,GO:0008152,GO:0008593,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009792,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010256,GO:0010604,GO:0010605,GO:0010646,GO:0010648,GO:0010796,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016322,GO:0019058,GO:0019068,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0021700,GO:0022008,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030029,GO:0030036,GO:0030100,GO:0030154,GO:0030163,GO:0030182,GO:0031090,GO:0031323,GO:0031324,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031410,GO:0031982,GO:0031984,GO:0032182,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032535,GO:0032801,GO:0032879,GO:0032880,GO:0032984,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040008,GO:0042058,GO:0042059,GO:0042176,GO:0042221,GO:0042493,GO:0042551,GO:0042886,GO:0043112,GO:0043130,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043328,GO:0043632,GO:0043900,GO:0043901,GO:0043903,GO:0043933,GO:0044085,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045324,GO:0045732,GO:0045807,GO:0045926,GO:0046618,GO:0046755,GO:0046907,GO:0048232,GO:0048468,GO:0048469,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048609,GO:0048646,GO:0048666,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051036,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0060255,GO:0060341,GO:0060627,GO:0061919,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070925,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072657,GO:0072665,GO:0072666,GO:0080090,GO:0090066,GO:0090087,GO:0090150,GO:0097352,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1903320,GO:1903321,GO:1903827,GO:1903829,GO:1904669,GO:1904951,GO:2000395,GO:2000397
Exons3
Evalue5.14e-51
EggNOG OGsKOG3284@1|root,KOG3284@2759|Eukaryota
EC3.4.23.1
Descriptionprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
Cds size261
COG categoryU
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789707.0385282-UTR-P-littoralis_Contig1495:981..22651680789707.0385282-UTR-P-littoralis_Contig1495:981..2265Pylaiella littoralis U1_48UTRP-littoralis_Contig1495 982..2265 +
1680789707.0488975-UTR-P-littoralis_Contig1495:2895..29161680789707.0488975-UTR-P-littoralis_Contig1495:2895..2916Pylaiella littoralis U1_48UTRP-littoralis_Contig1495 2896..2916 +
1680789707.0833573-UTR-P-littoralis_Contig1495:3607..42261680789707.0833573-UTR-P-littoralis_Contig1495:3607..4226Pylaiella littoralis U1_48UTRP-littoralis_Contig1495 3608..4226 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789707.0590978-CDS-P-littoralis_Contig1495:2916..29971680789707.0590978-CDS-P-littoralis_Contig1495:2916..2997Pylaiella littoralis U1_48CDSP-littoralis_Contig1495 2917..2997 +
1680789707.0732653-CDS-P-littoralis_Contig1495:3427..36071680789707.0732653-CDS-P-littoralis_Contig1495:3427..3607Pylaiella littoralis U1_48CDSP-littoralis_Contig1495 3428..3607 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1495.1.1prot_P-littoralis_Contig1495.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1495 2917..3607 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1495.1.1

>prot_P-littoralis_Contig1495.1.1 ID=prot_P-littoralis_Contig1495.1.1|Name=mRNA_P-littoralis_Contig1495.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNA
MRAAEELSEDQARQLLHDLDTSYSGFFRYLEMTQKP*
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mRNA from alignment at P-littoralis_Contig1495:982..4226+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1495.1.1 ID=mRNA_P-littoralis_Contig1495.1.1|Name=mRNA_P-littoralis_Contig1495.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3245bp|location=Sequence derived from alignment at P-littoralis_Contig1495:982..4226+ (Pylaiella littoralis U1_48)
TGCGCTGCCTACCGTGGGGAACGTTCATCACGCGGTTTCGGAGCAAGGCG ACGTTTCGAGATTGCGTTGATGTGCATTTCTCCGGGGGATCTGCGCTGCT GGTTGCCATGACAAATACAACGCACGATCTTGCCTCGATAACACGAGCAC GAGCGGTGTTGATAAAATGCCACATTTTTTTTCTCTATCTGACTGCCACT TGTAAGGGGGCAGCGCAGTAATTTTTCCAAGCTTTGGGCACCTGCAAGGA GGCAAACACACTGTGTTTTAGGCCCTGCTTGTTTTGTTTTGCATAGATAG CACCCGACGTGGACTCAAAATTGATTTCATCGGTCGAGCAACACTAGATG CGGAACGCGATTGAAGACCTCTCGATGTCTCAGCTCATGTCATTGTCTTG GCGACCAAATGCCTCCGTGGTTACCTTCGCCGCATCACCTTCCCCATTTT TTCAGACAACCAGGCGCTGGAAAATCTGCTGCGCGATTACCTCCTTCCCG CCCGACGCACGGCAATCATGCGCTTGCTTTCACAGTCGCCGTTTGCCGCG TGCTTTGCCCGCTCTGTCGCAGTATACCCGAGAGTGCTCGACACTAATAT CCCAGTACAAGGACGCGGAGAGCGCCCTGGTTGCGGACGGGAGCATCACT AACACTGTGTGAGTCCAGGGTCATGGTCGGGGTAAGAGTGCCATCACCCA ACCGCCGTGCGTAGGTTTATTGTAACCTTTACTCCCTCACCCTTATTGCT TGTTTTTCTTGTAGCACGACAAATGCCTGTTTTGTGACCACGTGACCACG AGCTAGACTGCGGTGGTAGTGAGCTAGTGTGAGAATCAACAACAACAACT TTATCGATTGTTTTTGCTGTTGTAATTGCTGCCGTGTATGGGGGTGCGTG TAGACGCGCTTTTGGGTGAGTCTGGCGTCATCTTCGCGACTGAACGCGGC ATCTGCGAATGCAGAAGCTGCTGTGTTGACCATTTGACTCGAGCATCCTC TAGCGGGTGGATTGGATCTTGGCCATTCCCACTCTGTAGGAAGGTGAGAG CCGTTCGTCGGTGGAAGCTGGCACTGGCCCAACCGTCTTTACATCTTCAA CATTGTGGTGTGACCGCCGCCCCCGTCTGTGTTTTTTGGTCTAAGCGATT TTATCAAGGAATACCAGCTGGACTGCCATTACGCGACGGACAGGCTTGTC AAGTACGGTGTCCCCGCCGCGGTGCTACATTGACAGGTGGACGAGAGGGA TCAGATTGGCAGGGCGCGACAGGCGGCGGAAACGGTGGGAGTTGGTTGCT GTTTTAAGCATGTCTGATACGAGCATTGTGTACAATTTGCCTCTGAGGAA CGCTTGGTTGATCACGCAACACCTAGACGTAGCTATGGCTGAGTAGCCAC AGAAACAATCAATGGTTTGCAAACCCGTGTACTTCGAAGTACGACGAGCA CTTTAGCTACGTAGCCGTACAACGAATAACCCAGATCATGTTACACGAAG AAACACTCATTCCCACGCTCATCAAAAACCTCATGTCCAACCTTTACCCA CAACAGCTTTTCTGGGGAACGCCTCTGCTGTGCAGCTGAGGCGTTTCATA GTTGCACGCAGTCTTTATATACTGAGATGTGTTGGATAAGTGATGGATTT AAGGCGGTGGTTCCACAAGGTATTTGTGGGGTAGCCGAGAAGCAGCGATC GTCACGATCTTGCCATGGTGCCGTGAGTTGGACACATGAAAATCACGTGT CCGCTGAACACACGCTGAGCGCAAAATGGCCGGTTCGCACGGCCCTTTCC CCATGAGCAATTACACGAAGCACAACCAACCGATATTGCTAAATGGTTCG TTCTCGAACTTGGAGCTCCCCGTCGCTTTTATTTTTGTGTGTGTTCTTCT CCCTTCTCCTCCAGACCCAATGTTTCATCACCGCCATGGACGCCTTGAAG TTGGAGCAGAGGGCTGTTGATGAGGTGCAGCCGCTCATCTACGACCTCTC CGACCGACTGAATAAGGTGTGTGTACGTGCCTCCCGTTTTCGGTTGGTGG AGAAGGGAGAGGGAAAAGGAGGGGGGGTGGCGTGCTAGTTGTGTGTCAAT CGCTTTTTGTGTGCCCGACCTCATTCAGTCTATTATGCTGCCAACCATCT CTCACGCCATGAGGCACCCCACTTCGTGTAACCCTCTGTGTCAGTAACCA TGGATTGTTGGGCCTTTTTCGCTGCACTGTTTTGCCCCCCGATCGCCCTC TGATTCAATCGCCGAACCCCTGCGTCCGTCGCCCGTCTCCTATCTCACGC TCCGCGATTATCGCTCCGTTCAGACACTCAAACGGCGGTGCCTGCAGTCA ACACCCAACACACGATGAAAACCCCCCCAAATGTAGCCCTAGACTCATCC CTGACTAAACTCTTATCCATAATCGCAACCCTATCTGACGCTGGAGGTGG ATGGCCTACCGAACGATTACGCCGGAACCCACAAGACTCGAGAGTGGCTC GTGACACTGAACGCCATGCGGGCAGCGGAGGAGCTGTCGGAAGATCAAGC GAGGCAGCTTTTGCACGATCTGGACACGAGCTACAGCGGTTTCTTTCGTT ACTTGGAGATGACTCAAAAGCCATGATATGGCAGCACAGCTACCACACGG CGAATATATTGAGAAGAGGTAACTATAGGGAGAGGGATCAGTGGCACGCA GTCGTACCGTTTTGCGGGAAGACACCACCCCCTTTCGCTTTCTACCTTGA AAACGAAGCATGACATGCAACGGTGACACACAGCCGGAAGAGGAGCTGGC GGCACGTCGCTAAACCGCTGAAAAGTCGCGAGAAGACATGGCGGAACTAG AGATGGGGCCTCCGAATGACTGGCAGACAGGAAGGATAGACTGTGCTACG CCTGTCACCAGAGAAGCACCGCTGACAGGGTTCCTGCGATATTCAGGCTC ATGCCGTGGAAACGATAGTATCCGTAGCGGGAATGTGCCATTGGAAATGG AACCGATGATCATTTCGTCCTGCTCAGCCTGCTGTTTCTCTTTCGCGCGA GAGAATAAGCGGGTAGCCGCTCCGTAGAGCGTGGGGCTGCCACTCGGCTG CCTATTTTCCCAAATGCGACCAGGTATGAAAGATGAGAGCCAACTCCACA AGGGTCGAGGGCGCCCCGCGACACTCCGAAATATTCACCTGGGTCTCACC GATACGATGCGACAGGCTGTCGTCTGAGCGCTTTCACGTCGAAGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1495:982..4226+

>mRNA_P-littoralis_Contig1495.1.1 ID=mRNA_P-littoralis_Contig1495.1.1|Name=mRNA_P-littoralis_Contig1495.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=261bp|location=Sequence derived from alignment at P-littoralis_Contig1495:982..4226+ (Pylaiella littoralis U1_48)
ATGGACGCCTTGAAGTTGGAGCAGAGGGCTGTTGATGAGGTGCAGCCGCT
CATCTACGACCTCTCCGACCGACTGAATAAGGTGGATGGCCTACCGAACG
ATTACGCCGGAACCCACAAGACTCGAGAGTGGCTCGTGACACTGAACGCC
ATGCGGGCAGCGGAGGAGCTGTCGGAAGATCAAGCGAGGCAGCTTTTGCA
CGATCTGGACACGAGCTACAGCGGTTTCTTTCGTTACTTGGAGATGACTC
AAAAGCCATGA
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