mRNA_P-littoralis_Contig1495.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: D7FWM8_ECTSI (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM8_ECTSI) HSP 1 Score: 263 bits (673), Expect = 9.760e-80 Identity = 131/139 (94.24%), Postives = 132/139 (94.96%), Query Frame = 1
Query: 1147 DFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLEMTQKP 1563
DFIKEYQLDC YA DRLVKYGVPA VLH QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDY GT KTREWLVTLNAMRAA+ELSEDQARQLLHDLDTSYS FFRYLEMTQKP
Sbjct: 95 DFIKEYQLDCPYAMDRLVKYGVPATVLHRQVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYEGTQKTREWLVTLNAMRAADELSEDQARQLLHDLDTSYSAFFRYLEMTQKP 233
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A836CDG2_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG2_9STRA) HSP 1 Score: 185 bits (470), Expect = 3.360e-50 Identity = 90/134 (67.16%), Postives = 105/134 (78.36%), Query Frame = 1
Query: 1144 SDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
S FI E+Q+D YA +RLVKYGVPA VLH DE D I RARQAAETTQCFITAMDALKL+QRAVDEVQPLI D+ DRLNK +GLP + G R WL+T N +RA+++L ++Q RQLLHDLD SYS FFR+L
Sbjct: 106 SAFIVEFQMDVPYAMERLVKYGVPATVLHRNHDEHDAISRARQAAETTQCFITAMDALKLDQRAVDEVQPLISDVMDRLNKCEGLPEGFEGVKTMRAWLITFNGLRASDQLDDEQVRQLLHDLDVSYSAFFRFL 239
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A6S9EJI3_HETAK (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EJI3_HETAK) HSP 1 Score: 160 bits (405), Expect = 3.880e-41 Identity = 85/137 (62.04%), Postives = 101/137 (73.72%), Query Frame = 1
Query: 1144 SDFIKEYQL-DCHYATDRLVKYGVPAAVLH*QVDERDQIG-RARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 1548
S FI + L DC A +RL+ YGVPA V+H D + + +ARQAAE TQ FITAMDALKLEQRAVDEVQPL+ D+ DRL ++ LP D+A T K WL LN +RAA+EL EDQARQLLHDLD +YSGFFR+LE
Sbjct: 100 SSFIAAWGLGDCALAAERLLTYGVPATVVHRSGDGQAGLALQARQAAEATQAFITAMDALKLEQRAVDEVQPLVADVMDRLTRLAALPADFAPTQKIEAWLKELNGLRAADELGEDQARQLLHDLDAAYSGFFRFLE 236
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A7S1FP92_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP92_9STRA) HSP 1 Score: 145 bits (365), Expect = 7.250e-36 Identity = 74/136 (54.41%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 1144 SDFIKEYQLDCHYATDRLVKYGVPAAVLH*-QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 1548
+FI+EYQ++C A DRL++ GVPA LH Q +E A + AE Q FITAMDALKL+QRAVDEVQPL+ DL D L +V GLP ++ + WL+ LNAMRA +E+ EDQARQL +LDT+Y+GF R+L+
Sbjct: 84 EEFIQEYQMECPRAVDRLLRTGVPATTLHQTQANEGAASNEAVRVAECVQHFITAMDALKLDQRAVDEVQPLLSDLMDSLTRVSGLPANFDPVDMLKRWLIKLNAMRAVDEIDEDQARQLSFELDTAYAGFHRFLK 219
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A812XGV8_SYMMI (Vps28 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XGV8_SYMMI) HSP 1 Score: 142 bits (359), Expect = 1.520e-34 Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 1150 FIKEYQLDCHYATDRLVKYGVPAAVLH*QVDER-DQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
F++EY +DC A DRL++ GVPA V+H D+R D + AET Q FITAMDALKLEQRAVDEVQPL+ +L L +V GLP D+ G K R WL LN MRA EELS+++ARQL+ DL+ +YS F RYL
Sbjct: 132 FMREYNIDCPRAYDRLIRAGVPATVMHMSHDDRADSV----IVAETVQAFITAMDALKLEQRAVDEVQPLLAELMSALTRVAGLPADFEGLVKMRLWLQKLNQMRAVEELSDEEARQLIFDLEGAYSAFHRYL 260
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: W7T9L8_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9L8_9STRA) HSP 1 Score: 140 bits (353), Expect = 5.010e-34 Identity = 71/133 (53.38%), Postives = 95/133 (71.43%), Query Frame = 1
Query: 1150 FIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 1548
F+ EY +DC A +RL++ GVP+ VL+ VD D G A + AET Q FITAMD ++LEQRAVDE+QP++ D+ L +V GLP ++ G+ K EWLVTLNAMRA + ++E+QARQLL DLD YS F +L+
Sbjct: 108 FMTEYHMDCPRAVERLLRLGVPSTVLNPSVD--DGRGDAIKVAETVQYFITAMDGVRLEQRAVDELQPMLTDIMTSLRRVQGLPAEFLGSKKLEEWLVTLNAMRAMDAITEEQARQLLFDLDQGYSSFHAWLK 238
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A507E1G2_9FUNG (Vacuolar protein sorting-associated protein 28 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E1G2_9FUNG) HSP 1 Score: 130 bits (326), Expect = 1.480e-30 Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 1141 LSDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
++ F++EY+L C AT RL++ GVPA V H D G A+ AET Q FIT MD+LKL AVD++ P + DL LN + LP DY G K R+WL+TLN M+A++E+++DQ RQLL DL+++ + F R L
Sbjct: 89 VNAFMREYKLTCPAATRRLLEIGVPATVEHATTDSTSSGGVAKHVAETVQVFITLMDSLKLNYVAVDQIHPQLSDLIQSLNSIPSLPTDYVGKGKIRDWLITLNKMKASDEINQDQVRQLLFDLESALTEFHRSL 223
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: E9LD18_BREAA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Breviata anathema TaxID=81100 RepID=E9LD18_BREAA) HSP 1 Score: 129 bits (324), Expect = 1.690e-30 Identity = 64/136 (47.06%), Postives = 91/136 (66.91%), Query Frame = 1
Query: 1141 LSDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 1548
+S F+ EY ++C A RL++ GVPA D Q+ + + AET Q FITAMD+LKL AVDE+QP+I+DL D +N++ GLP Y G K + WL+T+N M+A+++L+EDQ RQ+ DLD +Y GF R L+
Sbjct: 72 ISKFMDEYHMNCPAARKRLLEVGVPATTEF-GGDTSKQVDQGKAIAETVQHFITAMDSLKLNMVAVDELQPIIHDLMDSINRIVGLPESYDGIEKIKYWLLTMNKMKASDQLNEDQQRQMTFDLDQAYHGFHRCLQ 206
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: W2JRS1_PHYPR (Vacuolar protein sorting-associated protein 28 homolog n=23 Tax=Phytophthora TaxID=4783 RepID=W2JRS1_PHYPR) HSP 1 Score: 130 bits (326), Expect = 1.930e-30 Identity = 67/136 (49.26%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 1138 GLSDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
+ FI EY+LDC A +RLV+ GVPA V+H + + + A+T Q FIT MD LKL RAVDE+QPL+ ++ L V GLP D+AG K WL T+N+MRA+EEL E+QARQL DL+ +YS F +L
Sbjct: 101 SVESFIAEYRLDCPRALERLVRIGVPATVVHNTTNRKTD---SVNVAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMSSLTMVSGLPPDFAGRDKIEGWLRTMNSMRASEELDEEQARQLSFDLERAYSSFMAFL 233
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A7S4U5V2_9EUKA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4U5V2_9EUKA) HSP 1 Score: 129 bits (323), Expect = 3.110e-30 Identity = 66/138 (47.83%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 1135 FGLSDFIKEYQLDCHYATDRLVKYGVPAAVLH*QVDERDQIGR-ARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 1545
F L F+++Y L+C YA RLV+ G+PA + H + G A A+ TQ +ITAMDALKL+ AVDE+QP + DL + LNK+ LP D+ G K R WL LN M A+ +LS++ RQLL DLD+SY+ F R+L
Sbjct: 79 FNLDSFVRDYNLECTYALSRLVQKGIPATIEHNTDPDPTPTGNIAVLVAQATQNYITAMDALKLDMTAVDEIQPQLNDLFESLNKIPDLPPDFEGKTKLRTWLGILNGMGASVKLSDEDTRQLLFDLDSSYNSFHRFL 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1495.1.1 >prot_P-littoralis_Contig1495.1.1 ID=prot_P-littoralis_Contig1495.1.1|Name=mRNA_P-littoralis_Contig1495.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAback to top mRNA from alignment at P-littoralis_Contig1495:982..4226+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1495.1.1 ID=mRNA_P-littoralis_Contig1495.1.1|Name=mRNA_P-littoralis_Contig1495.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3245bp|location=Sequence derived from alignment at P-littoralis_Contig1495:982..4226+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1495:982..4226+ >mRNA_P-littoralis_Contig1495.1.1 ID=mRNA_P-littoralis_Contig1495.1.1|Name=mRNA_P-littoralis_Contig1495.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=261bp|location=Sequence derived from alignment at P-littoralis_Contig1495:982..4226+ (Pylaiella littoralis U1_48)back to top |